RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 ZNF706Q9Y5V0 76 aaPredicted RBP5.28□□□□□ -1.56
LDB1-203ENST00000461873 A0A0J9YXY3 114 aa5.27□□□□□ -1.57
LDB1-203ENST00000461873 M0R378 163 aa5.27□□□□□ -1.57
LDB1-203ENST00000461873 VPREB1P12018 145 aa5.27□□□□□ -1.57
LDB1-203ENST00000461873 CTAG1AP78358 180 aa5.27□□□□□ -1.57
LDB1-203ENST00000461873 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
LDB1-203ENST00000461873 SCGB1D4Q6XE38 83 aa5.27□□□□□ -1.57
LDB1-203ENST00000461873 TMEM238LA0A1B0GVL6 79 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 ETDCA0A1B0GVM5 59 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 TMEM238C9JI98 176 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 DLEU1O43261 78 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 SMIM13P0DJ93 91 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 DDTP30046 118 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 NPC2P61916 151 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 ADAMTSL4-AS1Q5T5F5 129 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 DAND5Q8N907 189 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 LINC00304Q8N9R0 145 aa5.26□□□□□ -1.57
LDB1-203ENST00000461873 A0A087X002 238 aa5.25□□□□□ -1.57
LDB1-203ENST00000461873 MIR7-3HGQ8N6C7 128 aa5.25□□□□□ -1.57
LDB1-203ENST00000461873 ANAPC11Q9NYG5 84 aa5.25□□□□□ -1.57
LDB1-203ENST00000461873 RNF213Q63HN8 5207 aa5.25□□□□□ -1.57
LDB1-203ENST00000461873 A0A0U1RQV1 116 aa5.24□□□□□ -1.57
LDB1-203ENST00000461873 NCR3O14931 201 aa5.24□□□□□ -1.57
LDB1-203ENST00000461873 EIF4EBP3O60516 100 aaPredicted RBP5.24□□□□□ -1.57
LDB1-203ENST00000461873 HINT1P49773 126 aaPredicted RBP5.24□□□□□ -1.57
LDB1-203ENST00000461873 PRYO14603 147 aa5.23□□□□□ -1.57
LDB1-203ENST00000461873 BATFQ16520 125 aa5.23□□□□□ -1.57
LDB1-203ENST00000461873 S100A7L2Q5SY68 101 aa5.23□□□□□ -1.57
LDB1-203ENST00000461873 HIST1H4GQ99525 98 aa5.23□□□□□ -1.57
LDB1-203ENST00000461873 LITAFQ99732 161 aa5.23□□□□□ -1.57
LDB1-203ENST00000461873 SPAG11AQ6PDA7 123 aa5.22□□□□□ -1.57
LDB1-203ENST00000461873 KRTAP13-1Q8IUC0 172 aa5.22□□□□□ -1.57
LDB1-203ENST00000461873 MUSTN1Q8IVN3 82 aa5.22□□□□□ -1.57
LDB1-203ENST00000461873 HIGD1BQ9P298 99 aa5.22□□□□□ -1.57
LDB1-203ENST00000461873 CBY1Q9Y3M2 126 aa5.22□□□□□ -1.57
LDB1-203ENST00000461873 LPAP08519 4548 aa5.22□□□□□ -1.57
LDB1-203ENST00000461873 SOSTDC1Q6X4U4 206 aa5.21□□□□□ -1.58
LDB1-203ENST00000461873 FXYD2P54710 66 aa5.2□□□□□ -1.58
LDB1-203ENST00000461873 CEND1Q8N111 149 aa5.2□□□□□ -1.58
LDB1-203ENST00000461873 LINC00337Q8N6G1 96 aa5.2□□□□□ -1.58
LDB1-203ENST00000461873 CDIP1Q9H305 208 aa5.2□□□□□ -1.58
LDB1-203ENST00000461873 TIMM17BO60830 172 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 HSD52Q0P140 79 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 KRTAP13-2Q52LG2 175 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 BVES-AS1Q5T3Y7 98 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 LINC00308Q8TCZ7 52 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 SMCR5Q8TEV8 140 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 SPANXDQ9BXN6 97 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 SNHG12Q9BXW3 62 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 KCNQ1DNQ9H478 68 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 SPANXB1Q9NS25 103 aaPredicted RBP5.19□□□□□ -1.58
LDB1-203ENST00000461873 SPANXCQ9NY87 97 aa5.19□□□□□ -1.58
LDB1-203ENST00000461873 TRBV10-3A0A0K0K1G6 114 aa5.18□□□□□ -1.58
LDB1-203ENST00000461873 SPRR4Q96PI1 79 aa5.18□□□□□ -1.58
LDB1-203ENST00000461873 RETNLBQ9BQ08 111 aa5.18□□□□□ -1.58
LDB1-203ENST00000461873 IGLV7-46A0A075B6I9 117 aa5.17□□□□□ -1.58
LDB1-203ENST00000461873 TRBV10-2A0A0K0K1G8 114 aa5.17□□□□□ -1.58
LDB1-203ENST00000461873 A4D1N5 150 aa5.17□□□□□ -1.58
LDB1-203ENST00000461873 TAL2Q16559 108 aa5.17□□□□□ -1.58
LDB1-203ENST00000461873 GAGE2AQ6NT46 116 aa5.17□□□□□ -1.58
LDB1-203ENST00000461873 Q8NDZ9 215 aa5.17□□□□□ -1.58
LDB1-203ENST00000461873 PPDPFQ9H3Y8 114 aa5.17□□□□□ -1.58
LDB1-203ENST00000461873 K7ERJ3 54 aa5.16□□□□□ -1.58
LDB1-203ENST00000461873 M0R143 59 aa5.16□□□□□ -1.58
LDB1-203ENST00000461873 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
LDB1-203ENST00000461873 RAB37Q96AX2 223 aa5.16□□□□□ -1.58
LDB1-203ENST00000461873 NHP2Q9NX24 153 aaKnown RBP5.16□□□□□ -1.58
LDB1-203ENST00000461873 TRAV23DV6A0A075B6W5 121 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 IGLV9-49A0A0B4J1Y8 123 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 NDUFC2O95298 119 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 CFC1BP0CG36 223 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 CFC1P0CG37 223 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 Q6ZVH6 145 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 Q8NBF4 154 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
LDB1-203ENST00000461873 SPINK1P00995 79 aa5.14□□□□□ -1.59
LDB1-203ENST00000461873 IFITM1P13164 125 aa5.14□□□□□ -1.59
LDB1-203ENST00000461873 SPRR1AP35321 89 aa5.14□□□□□ -1.59
LDB1-203ENST00000461873 C9orf153Q5TBE3 101 aa5.14□□□□□ -1.59
LDB1-203ENST00000461873 NAA38Q9BRA0 125 aaKnown RBP5.14□□□□□ -1.59
LDB1-203ENST00000461873 KRTAP4-8Q9BYQ9 185 aa5.14□□□□□ -1.59
LDB1-203ENST00000461873 LOC107984156A0A0G2JMH3 177 aa5.13□□□□□ -1.59
LDB1-203ENST00000461873 B5MCH6 92 aa5.13□□□□□ -1.59
LDB1-203ENST00000461873 H7C2G1 150 aa5.13□□□□□ -1.59
LDB1-203ENST00000461873 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
LDB1-203ENST00000461873 ARL17AQ8IVW1 177 aa5.13□□□□□ -1.59
LDB1-203ENST00000461873 COPS9Q8WXC6 57 aa5.13□□□□□ -1.59
LDB1-203ENST00000461873 ZNF73O43830 326 aaPredicted RBP5.12□□□□□ -1.59
LDB1-203ENST00000461873 MOBPQ13875 183 aa5.12□□□□□ -1.59
LDB1-203ENST00000461873 TPRXLQ17RH7 258 aa5.12□□□□□ -1.59
LDB1-203ENST00000461873 Q6ZRX8 168 aa5.12□□□□□ -1.59
LDB1-203ENST00000461873 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
LDB1-203ENST00000461873 A6NDN8 102 aa5.11□□□□□ -1.59
LDB1-203ENST00000461873 TAX1BP3O14907 124 aa5.1□□□□□ -1.59
LDB1-203ENST00000461873 IGLV6-57P01721 117 aa5.1□□□□□ -1.59
LDB1-203ENST00000461873 PRO1854Q9UHT4 67 aa5.1□□□□□ -1.59
LDB1-203ENST00000461873 KRTAP4-16G5E9R7 235 aaPredicted RBP5.09□□□□□ -1.59
LDB1-203ENST00000461873 LINC00483Q53H64 154 aa5.09□□□□□ -1.59
LDB1-203ENST00000461873 COL5A1-AS1Q5SY13 56 aa5.09□□□□□ -1.59
LDB1-203ENST00000461873 DHRS4-AS1Q9P1J3 65 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms