RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 ETDCA0A1B0GVM5 59 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 A0A1B0GXF2 115 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 IGIPA6NJ69 53 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 H3BRM9 83 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 K7EMI3 77 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 SRP19P09132 144 aaKnown RBP2.75□□□□□ -1.97
BRCA1-206ENST00000461574 RPS29P62273 56 aaKnown RBP2.75□□□□□ -1.97
BRCA1-206ENST00000461574 NDUFA5Q16718 116 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 KRTAP19-2Q3LHN2 52 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 SND1-IT1Q9HBX3 110 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 NAT8Q9UHE5 227 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 ERG28Q9UKR5 140 aa2.75□□□□□ -1.97
BRCA1-206ENST00000461574 TINCRA0A1B0GVN0 87 aa2.74□□□□□ -1.97
BRCA1-206ENST00000461574 C9orf92A6NGG3 77 aa2.74□□□□□ -1.97
BRCA1-206ENST00000461574 C9orf153Q5TBE3 101 aa2.74□□□□□ -1.97
BRCA1-206ENST00000461574 ATP5L2Q7Z4Y8 100 aa2.74□□□□□ -1.97
BRCA1-206ENST00000461574 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
BRCA1-206ENST00000461574 ZNF625Q96I27 306 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-206ENST00000461574 SCGB3A1Q96QR1 104 aa2.74□□□□□ -1.97
BRCA1-206ENST00000461574 NXT2Q9NPJ8 142 aaKnown RBP2.74□□□□□ -1.97
BRCA1-206ENST00000461574 A0A1B0GV72 72 aa2.73□□□□□ -1.97
BRCA1-206ENST00000461574 COX17Q14061 63 aa2.73□□□□□ -1.97
BRCA1-206ENST00000461574 SSBP3-AS1Q7Z2R9 100 aa2.73□□□□□ -1.97
BRCA1-206ENST00000461574 IGLV5-45A0A087WSX0 123 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 NCR3O14931 201 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 LINC00158P58513 81 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 CD164Q04900 197 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 LINC00483Q53H64 154 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 TOMM6Q96B49 74 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 LIMD2Q9BT23 127 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 USH2AO75445 5202 aa2.72□□□□□ -1.97
BRCA1-206ENST00000461574 SYNE2Q8WXH0 6885 aaKnown RBP2.71□□□□□ -1.98
BRCA1-206ENST00000461574 NDUFA6P56556 154 aa2.71□□□□□ -1.98
BRCA1-206ENST00000461574 PMVKQ15126 192 aa2.71□□□□□ -1.98
BRCA1-206ENST00000461574 SFTA2Q6UW10 78 aa2.71□□□□□ -1.98
BRCA1-206ENST00000461574 TCTE3Q8IZS6 198 aa2.71□□□□□ -1.98
BRCA1-206ENST00000461574 MTURNQ8N3F0 131 aa2.71□□□□□ -1.98
BRCA1-206ENST00000461574 Q8NDZ9 215 aa2.71□□□□□ -1.98
BRCA1-206ENST00000461574 CST9LQ9H4G1 147 aa2.71□□□□□ -1.98
BRCA1-206ENST00000461574 FLGP20930 4061 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-206ENST00000461574 LINC01549A6NIU2 74 aa2.7□□□□□ -1.98
BRCA1-206ENST00000461574 IGLV6-57P01721 117 aa2.7□□□□□ -1.98
BRCA1-206ENST00000461574 LINC00614P0C842 121 aa2.7□□□□□ -1.98
BRCA1-206ENST00000461574 ADCYAP1P18509 176 aa2.7□□□□□ -1.98
BRCA1-206ENST00000461574 PEA15Q15121 130 aa2.7□□□□□ -1.98
BRCA1-206ENST00000461574 Q6Q795 121 aa2.7□□□□□ -1.98
BRCA1-206ENST00000461574 SSPOA2VEC9 5147 aa2.7□□□□□ -1.98
BRCA1-206ENST00000461574 FCGBPQ9Y6R7 5405 aaPredicted RBP2.69□□□□□ -1.98
BRCA1-206ENST00000461574 TRAV9-1A0A075B6T8 112 aa2.69□□□□□ -1.98
BRCA1-206ENST00000461574 SCGB1A1P11684 91 aa2.69□□□□□ -1.98
BRCA1-206ENST00000461574 MEIG1Q5JSS6 88 aa2.69□□□□□ -1.98
BRCA1-206ENST00000461574 TMEM170BQ5T4T1 132 aa2.69□□□□□ -1.98
BRCA1-206ENST00000461574 HRCT1Q6UXD1 115 aa2.69□□□□□ -1.98
BRCA1-206ENST00000461574 SMCO4Q9NRQ5 59 aa2.69□□□□□ -1.98
BRCA1-206ENST00000461574 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
BRCA1-206ENST00000461574 TRBV10-3A0A0K0K1G6 114 aa2.68□□□□□ -1.98
BRCA1-206ENST00000461574 A6NDN8 102 aa2.68□□□□□ -1.98
BRCA1-206ENST00000461574 C9JQL5 133 aa2.68□□□□□ -1.98
BRCA1-206ENST00000461574 ERC2-IT1O76042 136 aa2.68□□□□□ -1.98
BRCA1-206ENST00000461574 ZNF22P17026 224 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-206ENST00000461574 SPRR1AP35321 89 aa2.68□□□□□ -1.98
BRCA1-206ENST00000461574 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
BRCA1-206ENST00000461574 KRTAP4-16G5E9R7 235 aaPredicted RBP2.67□□□□□ -1.98
BRCA1-206ENST00000461574 MT-ND4LP03901 98 aa2.67□□□□□ -1.98
BRCA1-206ENST00000461574 IGLC3P0DOY3 106 aa2.67□□□□□ -1.98
BRCA1-206ENST00000461574 JOSD1Q15040 202 aaPredicted RBP2.67□□□□□ -1.98
BRCA1-206ENST00000461574 KIAA1644Q3SXP7 199 aa2.67□□□□□ -1.98
BRCA1-206ENST00000461574 Q6ZRX8 168 aa2.67□□□□□ -1.98
BRCA1-206ENST00000461574 FA2HQ7L5A8 372 aa2.67□□□□□ -1.98
BRCA1-206ENST00000461574 TSTD3H0UI37 97 aa2.66□□□□□ -1.98
BRCA1-206ENST00000461574 SMIM13P0DJ93 91 aa2.66□□□□□ -1.98
BRCA1-206ENST00000461574 DDTP30046 118 aa2.66□□□□□ -1.98
BRCA1-206ENST00000461574 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
BRCA1-206ENST00000461574 S100A7L2Q5SY68 101 aa2.66□□□□□ -1.98
BRCA1-206ENST00000461574 SLC25A34Q6PIV7 304 aa2.66□□□□□ -1.98
BRCA1-206ENST00000461574 MIR7-3HGQ8N6C7 128 aa2.66□□□□□ -1.98
BRCA1-206ENST00000461574 Q9BRP9 147 aa2.66□□□□□ -1.98
BRCA1-206ENST00000461574 A0A1B0GWB2 263 aa2.65□□□□□ -1.99
BRCA1-206ENST00000461574 C11orf86A6NJI1 115 aa2.65□□□□□ -1.99
BRCA1-206ENST00000461574 C4orf26Q17RF5 130 aa2.65□□□□□ -1.99
BRCA1-206ENST00000461574 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
BRCA1-206ENST00000461574 MIEN1Q9BRT3 115 aa2.65□□□□□ -1.99
BRCA1-206ENST00000461574 FAM240AA0A1B0GVK7 77 aa2.64□□□□□ -1.99
BRCA1-206ENST00000461574 LINC00587B1AMM8 73 aa2.64□□□□□ -1.99
BRCA1-206ENST00000461574 H7C2G1 150 aa2.64□□□□□ -1.99
BRCA1-206ENST00000461574 HINT1P49773 126 aaPredicted RBP2.64□□□□□ -1.99
BRCA1-206ENST00000461574 BAGE3Q86Y29 109 aa2.64□□□□□ -1.99
BRCA1-206ENST00000461574 ST20-AS1Q8NBB2 130 aa2.64□□□□□ -1.99
BRCA1-206ENST00000461574 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
BRCA1-206ENST00000461574 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
BRCA1-206ENST00000461574 LINC01546A6NGU7 62 aa2.63□□□□□ -1.99
BRCA1-206ENST00000461574 LCE3AQ5TA76 89 aa2.63□□□□□ -1.99
BRCA1-206ENST00000461574 COMMD7Q86VX2 200 aa2.63□□□□□ -1.99
BRCA1-206ENST00000461574 FAM218AQ96MZ4 157 aa2.63□□□□□ -1.99
BRCA1-206ENST00000461574 LAMTOR3Q9UHA4 124 aa2.63□□□□□ -1.99
BRCA1-206ENST00000461574 TRBV10-2A0A0K0K1G8 114 aa2.62□□□□□ -1.99
BRCA1-206ENST00000461574 ZNF73O43830 326 aaPredicted RBP2.62□□□□□ -1.99
BRCA1-206ENST00000461574 HBDP02042 147 aa2.62□□□□□ -1.99
BRCA1-206ENST00000461574 PMCHL1Q16048 86 aa2.62□□□□□ -1.99
BRCA1-206ENST00000461574 SIGMAR1Q99720 223 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms