RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 Q1T7F1 81 aa5.88□□□□□ -1.47
BRCA1-205ENST00000461221 A0A087WTM6 91 aa5.87□□□□□ -1.47
BRCA1-205ENST00000461221 TTC28Q96AY4 2481 aa5.87□□□□□ -1.47
BRCA1-205ENST00000461221 CSNK1G2-AS1Q8NCQ2 148 aa5.87□□□□□ -1.47
BRCA1-205ENST00000461221 C9orf163Q8N9P6 203 aa5.87□□□□□ -1.47
BRCA1-205ENST00000461221 SPRR4Q96PI1 79 aa5.86□□□□□ -1.47
BRCA1-205ENST00000461221 COL27A1Q8IZC6 1860 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-205ENST00000461221 Q8N1X5 172 aa5.85□□□□□ -1.47
BRCA1-205ENST00000461221 ZNF575Q86XF7 245 aa5.83□□□□□ -1.48
BRCA1-205ENST00000461221 C19orf73Q9NVV2 129 aa5.83□□□□□ -1.48
BRCA1-205ENST00000461221 COL4A2P08572 1712 aa5.83□□□□□ -1.48
BRCA1-205ENST00000461221 A0A0G2JQZ4 141 aa5.82□□□□□ -1.48
BRCA1-205ENST00000461221 A0A1W2PNN7 141 aa5.82□□□□□ -1.48
BRCA1-205ENST00000461221 CAMK2N1Q7Z7J9 78 aa5.82□□□□□ -1.48
BRCA1-205ENST00000461221 PSORS1C2Q9UIG4 136 aa5.82□□□□□ -1.48
BRCA1-205ENST00000461221 K7EIL1 84 aa5.82□□□□□ -1.48
BRCA1-205ENST00000461221 A0A1W2PNM2 257 aa5.81□□□□□ -1.48
BRCA1-205ENST00000461221 CNBPP62633 177 aaKnown RBP5.81□□□□□ -1.48
BRCA1-205ENST00000461221 EIF4EBP3O60516 100 aaPredicted RBP5.81□□□□□ -1.48
BRCA1-205ENST00000461221 LINC00612Q8N6U2 182 aa5.81□□□□□ -1.48
BRCA1-205ENST00000461221 ANAPC11Q9NYG5 84 aa5.81□□□□□ -1.48
BRCA1-205ENST00000461221 SMR3BP02814 79 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-205ENST00000461221 KRTAP10-11P60412 298 aa5.8□□□□□ -1.48
BRCA1-205ENST00000461221 MYO9AB2RTY4 2548 aa5.79□□□□□ -1.48
BRCA1-205ENST00000461221 Q6ZSA8 131 aa5.79□□□□□ -1.48
BRCA1-205ENST00000461221 A0A1B0GU33 70 aa5.79□□□□□ -1.48
BRCA1-205ENST00000461221 LRRK2Q5S007 2527 aa5.77□□□□□ -1.49
BRCA1-205ENST00000461221 A0A0A0MQY5 61 aa5.77□□□□□ -1.49
BRCA1-205ENST00000461221 PRR26Q8N8Z3 221 aa5.76□□□□□ -1.49
BRCA1-205ENST00000461221 Q75L30 129 aa5.75□□□□□ -1.49
BRCA1-205ENST00000461221 IGLV7-46A0A075B6I9 117 aa5.75□□□□□ -1.49
BRCA1-205ENST00000461221 EP400Q96L91 3159 aa5.74□□□□□ -1.49
BRCA1-205ENST00000461221 BPTFQ12830 3046 aa5.74□□□□□ -1.49
BRCA1-205ENST00000461221 OCR1Q9BZK8 76 aa5.74□□□□□ -1.49
BRCA1-205ENST00000461221 HRES1P13985 223 aa5.73□□□□□ -1.49
BRCA1-205ENST00000461221 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
BRCA1-205ENST00000461221 GIG44P09565 113 aaPredicted RBP5.73□□□□□ -1.49
BRCA1-205ENST00000461221 IGF2RP11717 2491 aa5.72□□□□□ -1.49
BRCA1-205ENST00000461221 NCOR2Q9Y618 2525 aa5.72□□□□□ -1.49
BRCA1-205ENST00000461221 FN1P02751 2386 aaKnown RBP5.71□□□□□ -1.5
BRCA1-205ENST00000461221 WIPF1O43516 503 aa5.71□□□□□ -1.5
BRCA1-205ENST00000461221 PIEZO2Q9H5I5 2752 aa5.7□□□□□ -1.5
BRCA1-205ENST00000461221 JMJD1CQ15652 2540 aa5.7□□□□□ -1.5
BRCA1-205ENST00000461221 BRCA2P51587 3418 aa5.7□□□□□ -1.5
BRCA1-205ENST00000461221 CASC10Q5T4H9 136 aa5.7□□□□□ -1.5
BRCA1-205ENST00000461221 LINC01558Q9Y6Z2 57 aa5.7□□□□□ -1.5
BRCA1-205ENST00000461221 ABCA12Q86UK0 2595 aa5.69□□□□□ -1.5
BRCA1-205ENST00000461221 M0R2T5 61 aa5.69□□□□□ -1.5
BRCA1-205ENST00000461221 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
BRCA1-205ENST00000461221 S4R3F8 94 aa5.68□□□□□ -1.5
BRCA1-205ENST00000461221 FAM229BQ4G0N7 80 aa5.68□□□□□ -1.5
BRCA1-205ENST00000461221 F8P00451 2351 aa5.67□□□□□ -1.5
BRCA1-205ENST00000461221 KRTAP10-3P60369 221 aa5.66□□□□□ -1.5
BRCA1-205ENST00000461221 ZCCHC13Q8WW36 166 aaKnown RBP5.66□□□□□ -1.5
BRCA1-205ENST00000461221 PIEZO1Q92508 2521 aa5.66□□□□□ -1.5
BRCA1-205ENST00000461221 ZNF462Q96JM2 2506 aa5.66□□□□□ -1.5
BRCA1-205ENST00000461221 ZFYVE26Q68DK2 2539 aa5.63□□□□□ -1.51
BRCA1-205ENST00000461221 TLN1Q9Y490 2541 aaKnown RBP5.63□□□□□ -1.51
BRCA1-205ENST00000461221 H3BS24 57 aa5.63□□□□□ -1.51
BRCA1-205ENST00000461221 A0A096LNT2 108 aa5.62□□□□□ -1.51
BRCA1-205ENST00000461221 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-205ENST00000461221 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
BRCA1-205ENST00000461221 SPINK7P58062 85 aa5.61□□□□□ -1.51
BRCA1-205ENST00000461221 TLN2Q9Y4G6 2542 aa5.6□□□□□ -1.51
BRCA1-205ENST00000461221 TNP2Q05952 138 aa5.59□□□□□ -1.51
BRCA1-205ENST00000461221 USP9XQ93008 2570 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-205ENST00000461221 R4GN34 69 aa5.59□□□□□ -1.51
BRCA1-205ENST00000461221 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
BRCA1-205ENST00000461221 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-205ENST00000461221 PCSK5Q92824 1860 aa5.57□□□□□ -1.52
BRCA1-205ENST00000461221 LAMA3Q16787 3333 aa5.57□□□□□ -1.52
BRCA1-205ENST00000461221 Q5W150 140 aa5.56□□□□□ -1.52
BRCA1-205ENST00000461221 SRCAPQ6ZRS2 3230 aa5.56□□□□□ -1.52
BRCA1-205ENST00000461221 PKD1L2Q7Z442 2459 aa5.56□□□□□ -1.52
BRCA1-205ENST00000461221 ROMO1P60602 79 aa5.55□□□□□ -1.52
BRCA1-205ENST00000461221 PLAC8Q9NZF1 115 aa5.55□□□□□ -1.52
BRCA1-205ENST00000461221 Q5VV11 94 aa5.55□□□□□ -1.52
BRCA1-205ENST00000461221 Q5XG85 94 aa5.55□□□□□ -1.52
BRCA1-205ENST00000461221 RPL37P61927 97 aaKnown RBP5.54□□□□□ -1.52
BRCA1-205ENST00000461221 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
BRCA1-205ENST00000461221 SPRR1AP35321 89 aa5.51□□□□□ -1.53
BRCA1-205ENST00000461221 SPRR1BP22528 89 aa5.51□□□□□ -1.53
BRCA1-205ENST00000461221 FP248Q71RG6 208 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-205ENST00000461221 WDFY3Q8IZQ1 3526 aa5.5□□□□□ -1.53
BRCA1-205ENST00000461221 CR1P17927 2039 aa5.5□□□□□ -1.53
BRCA1-205ENST00000461221 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
BRCA1-205ENST00000461221 H1FX-AS1Q4G0G2 97 aa5.48□□□□□ -1.53
BRCA1-205ENST00000461221 ACANP16112 2415 aa5.48□□□□□ -1.53
BRCA1-205ENST00000461221 ASB16-AS1Q495Z4 193 aa5.48□□□□□ -1.53
BRCA1-205ENST00000461221 M0QZ58 72 aa5.47□□□□□ -1.53
BRCA1-205ENST00000461221 SETD2Q9BYW2 2564 aaPredicted RBP5.46□□□□□ -1.53
BRCA1-205ENST00000461221 PLAC4Q8WY50 150 aa5.46□□□□□ -1.53
BRCA1-205ENST00000461221 KRTAP1-3Q8IUG1 177 aa5.46□□□□□ -1.54
BRCA1-205ENST00000461221 VCANP13611 3396 aa5.45□□□□□ -1.54
BRCA1-205ENST00000461221 ANKRD17O75179 2603 aaKnown RBP5.45□□□□□ -1.54
BRCA1-205ENST00000461221 USP9YO00507 2555 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-205ENST00000461221 SPTBN5Q9NRC6 3674 aaKnown RBP5.45□□□□□ -1.54
BRCA1-205ENST00000461221 KRTAP1-1Q07627 177 aa5.44□□□□□ -1.54
BRCA1-205ENST00000461221 LAMA2P24043 3122 aaKnown RBP5.43□□□□□ -1.54
BRCA1-205ENST00000461221 DNAH12Q6ZR08 3092 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms