RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 BAHCC1Q9P281 2608 aa11.66□□□□□ -0.54
CHRD-208ENST00000460627 IGLV1-50A0A075B6I6 118 aa11.66□□□□□ -0.54
CHRD-208ENST00000460627 CDIP1Q9H305 208 aa11.66□□□□□ -0.54
CHRD-208ENST00000460627 TLX1NBP0CAT3 122 aa11.66□□□□□ -0.54
CHRD-208ENST00000460627 FAM168BA1KXE4 195 aa11.65□□□□□ -0.54
CHRD-208ENST00000460627 PRR4Q16378 134 aa11.65□□□□□ -0.54
CHRD-208ENST00000460627 A0A087WTM6 91 aa11.65□□□□□ -0.54
CHRD-208ENST00000460627 Q6ZQT0 140 aa11.65□□□□□ -0.54
CHRD-208ENST00000460627 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.54
CHRD-208ENST00000460627 V9GYY9 64 aa11.64□□□□□ -0.55
CHRD-208ENST00000460627 EIF4EBP3O60516 100 aaPredicted RBP11.63□□□□□ -0.55
CHRD-208ENST00000460627 LINC00528Q8N1L1 170 aa11.62□□□□□ -0.55
CHRD-208ENST00000460627 LAMA1P25391 3075 aa11.62□□□□□ -0.55
CHRD-208ENST00000460627 SPACA4Q8TDM5 124 aa11.6□□□□□ -0.55
CHRD-208ENST00000460627 PLA2G2DQ9UNK4 145 aa11.6□□□□□ -0.55
CHRD-208ENST00000460627 VCANP13611 3396 aa11.6□□□□□ -0.55
CHRD-208ENST00000460627 MPLKIPQ8TAP9 179 aa11.59□□□□□ -0.55
CHRD-208ENST00000460627 H0Y9P7 68 aa11.59□□□□□ -0.55
CHRD-208ENST00000460627 PRR15LQ9BU68 103 aa11.58□□□□□ -0.56
CHRD-208ENST00000460627 TYMSOSQ8TAI1 123 aa11.58□□□□□ -0.56
CHRD-208ENST00000460627 SPTSSBQ8NFR3 76 aa11.58□□□□□ -0.56
CHRD-208ENST00000460627 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
CHRD-208ENST00000460627 FLNCQ14315 2725 aa11.57□□□□□ -0.56
CHRD-208ENST00000460627 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
CHRD-208ENST00000460627 TMEM254Q8TBM7 123 aa11.57□□□□□ -0.56
CHRD-208ENST00000460627 CNBPP62633 177 aaKnown RBP11.56□□□□□ -0.56
CHRD-208ENST00000460627 TRBV7-4A0A0J9YYF1 115 aa11.56□□□□□ -0.56
CHRD-208ENST00000460627 EYSQ5T1H1 3165 aa11.54□□□□□ -0.56
CHRD-208ENST00000460627 PLA2G1BP04054 148 aaKnown RBP11.54□□□□□ -0.56
CHRD-208ENST00000460627 SERP1Q9Y6X1 66 aa11.53□□□□□ -0.56
CHRD-208ENST00000460627 RPL37AP61513 92 aaKnown RBP11.52□□□□□ -0.56
CHRD-208ENST00000460627 TP53AIP1Q9HCN2 124 aa11.52□□□□□ -0.56
CHRD-208ENST00000460627 GCN1Q92616 2671 aaKnown RBP11.52□□□□□ -0.56
CHRD-208ENST00000460627 LINC00336Q6ZUF6 198 aa11.51□□□□□ -0.57
CHRD-208ENST00000460627 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
CHRD-208ENST00000460627 hDV103S1A0JD37 113 aa11.51□□□□□ -0.57
CHRD-208ENST00000460627 PCOTHQ58A44 107 aa11.5□□□□□ -0.57
CHRD-208ENST00000460627 ZNF861PO60384 105 aa11.5□□□□□ -0.57
CHRD-208ENST00000460627 SMIM29Q86T20 159 aa11.5□□□□□ -0.57
CHRD-208ENST00000460627 RETNLBQ9BQ08 111 aa11.49□□□□□ -0.57
CHRD-208ENST00000460627 UBR5O95071 2799 aaPredicted RBP11.49□□□□□ -0.57
CHRD-208ENST00000460627 BRK1Q8WUW1 75 aa11.48□□□□□ -0.57
CHRD-208ENST00000460627 K7ERS5 55 aa11.48□□□□□ -0.57
CHRD-208ENST00000460627 REV3LO60673 3130 aa11.48□□□□□ -0.57
CHRD-208ENST00000460627 SMIM26A0A096LP01 95 aa11.46□□□□□ -0.57
CHRD-208ENST00000460627 C1orf64Q8NEQ6 169 aa11.46□□□□□ -0.57
CHRD-208ENST00000460627 SSBP3-AS1Q7Z2R9 100 aa11.44□□□□□ -0.58
CHRD-208ENST00000460627 SPEGQ15772 3267 aa11.44□□□□□ -0.58
CHRD-208ENST00000460627 A0A1W2PNN7 141 aa11.43□□□□□ -0.58
CHRD-208ENST00000460627 FRYQ5TBA9 3013 aa11.43□□□□□ -0.58
CHRD-208ENST00000460627 Q8N377 158 aa11.42□□□□□ -0.58
CHRD-208ENST00000460627 IGKV2D-30A0A075B6S6 120 aa11.41□□□□□ -0.58
CHRD-208ENST00000460627 IGKV2-30P06310 120 aa11.41□□□□□ -0.58
CHRD-208ENST00000460627 FRYLO94915 3013 aa11.41□□□□□ -0.58
CHRD-208ENST00000460627 LINC00313P59037 77 aa11.41□□□□□ -0.58
CHRD-208ENST00000460627 IGLV5-37A0A075B6J1 123 aa11.4□□□□□ -0.58
CHRD-208ENST00000460627 SPTBN5Q9NRC6 3674 aaKnown RBP11.4□□□□□ -0.58
CHRD-208ENST00000460627 SVIPQ8NHG7 77 aa11.39□□□□□ -0.59
CHRD-208ENST00000460627 FAM104AQ969W3 186 aa11.39□□□□□ -0.59
CHRD-208ENST00000460627 IGFL1Q6UW32 110 aa11.38□□□□□ -0.59
CHRD-208ENST00000460627 COL6A3P12111 3177 aa11.38□□□□□ -0.59
CHRD-208ENST00000460627 TNRC18O15417 2968 aaPredicted RBP11.38□□□□□ -0.59
CHRD-208ENST00000460627 CELSR3Q9NYQ7 3312 aa11.38□□□□□ -0.59
CHRD-208ENST00000460627 H3BPC8 53 aa11.37□□□□□ -0.59
CHRD-208ENST00000460627 A8MWP4 228 aa11.37□□□□□ -0.59
CHRD-208ENST00000460627 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
CHRD-208ENST00000460627 PSORS1C2Q9UIG4 136 aa11.37□□□□□ -0.59
CHRD-208ENST00000460627 A6NED7 52 aa11.36□□□□□ -0.59
CHRD-208ENST00000460627 IGLV7-43P04211 117 aa11.36□□□□□ -0.59
CHRD-208ENST00000460627 ATMQ13315 3056 aa11.36□□□□□ -0.59
CHRD-208ENST00000460627 SPAG11AQ6PDA7 123 aa11.35□□□□□ -0.59
CHRD-208ENST00000460627 NBEAL1Q6ZS30 2694 aa11.35□□□□□ -0.59
CHRD-208ENST00000460627 TRAV22A0A0B4J277 110 aa11.34□□□□□ -0.59
CHRD-208ENST00000460627 ITPR1Q14643 2758 aa11.33□□□□□ -0.6
CHRD-208ENST00000460627 TNP2Q05952 138 aa11.31□□□□□ -0.6
CHRD-208ENST00000460627 COL12A1Q99715 3063 aa11.3□□□□□ -0.6
CHRD-208ENST00000460627 DMXL2Q8TDJ6 3036 aa11.3□□□□□ -0.6
CHRD-208ENST00000460627 SPRR4Q96PI1 79 aa11.29□□□□□ -0.6
CHRD-208ENST00000460627 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
CHRD-208ENST00000460627 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
CHRD-208ENST00000460627 SPINK1P00995 79 aa11.28□□□□□ -0.6
CHRD-208ENST00000460627 SMR3BP02814 79 aaPredicted RBP11.28□□□□□ -0.6
CHRD-208ENST00000460627 ITPR2Q14571 2701 aa11.28□□□□□ -0.6
CHRD-208ENST00000460627 K7EQZ3 153 aa11.28□□□□□ -0.6
CHRD-208ENST00000460627 MRPL34Q9BQ48 92 aaKnown RBP11.26□□□□□ -0.61
CHRD-208ENST00000460627 Q96NJ1 140 aa11.25□□□□□ -0.61
CHRD-208ENST00000460627 J3QL48 77 aa11.24□□□□□ -0.61
CHRD-208ENST00000460627 PRR15Q8IV56 129 aa11.24□□□□□ -0.61
CHRD-208ENST00000460627 MYO15AQ9UKN7 3530 aa11.22□□□□□ -0.61
CHRD-208ENST00000460627 C7orf65Q6ZTY9 151 aa11.21□□□□□ -0.61
CHRD-208ENST00000460627 LOC101927531A0A1B0GV80 90 aa11.21□□□□□ -0.62
CHRD-208ENST00000460627 ACYP2P14621 99 aa11.21□□□□□ -0.62
CHRD-208ENST00000460627 TACC2O95359 2948 aa11.2□□□□□ -0.62
CHRD-208ENST00000460627 ANAPC11Q9NYG5 84 aa11.2□□□□□ -0.62
CHRD-208ENST00000460627 IGLV5-48A0A075B6I7 105 aa11.2□□□□□ -0.62
CHRD-208ENST00000460627 NBEAL2Q6ZNJ1 2754 aa11.2□□□□□ -0.62
CHRD-208ENST00000460627 ADGRG4Q8IZF6 3080 aa11.2□□□□□ -0.62
CHRD-208ENST00000460627 NSD1Q96L73 2696 aaPredicted RBP11.19□□□□□ -0.62
CHRD-208ENST00000460627 ATP11AUNQ6ZP68 121 aa11.19□□□□□ -0.62
CHRD-208ENST00000460627 C8orf17Q9NRJ1 99 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms