RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SOSTDC1Q6X4U4 206 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 C2orf91Q6ZV80 131 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 RAB37Q96AX2 223 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
SMNDC1-203ENST00000460483 C1orf137Q5JT78 98 aa6.87□□□□□ -1.31
SMNDC1-203ENST00000460483 PRO1933Q9H354 126 aa6.87□□□□□ -1.31
SMNDC1-203ENST00000460483 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 BCE1O60756 84 aa6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 IGLV6-57P01721 117 aa6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 PRR3P79522 188 aaKnown RBP6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 VAMP3Q15836 100 aa6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 KCNQ1DNQ9H478 68 aa6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
SMNDC1-203ENST00000460483 DNAH5Q8TE73 4624 aa6.85□□□□□ -1.31
SMNDC1-203ENST00000460483 TRAV23DV6A0A075B6W5 121 aa6.85□□□□□ -1.31
SMNDC1-203ENST00000460483 ETDCA0A1B0GVM5 59 aa6.85□□□□□ -1.31
SMNDC1-203ENST00000460483 SNCGO76070 127 aa6.85□□□□□ -1.31
SMNDC1-203ENST00000460483 Q5VSD8 79 aa6.85□□□□□ -1.31
SMNDC1-203ENST00000460483 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
SMNDC1-203ENST00000460483 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
SMNDC1-203ENST00000460483 A0A0B4J2C4 111 aa6.84□□□□□ -1.31
SMNDC1-203ENST00000460483 UBE2AP49459 152 aa6.84□□□□□ -1.31
SMNDC1-203ENST00000460483 LINC00337Q8N6G1 96 aa6.84□□□□□ -1.31
SMNDC1-203ENST00000460483 DIRC1Q969H9 104 aa6.84□□□□□ -1.31
SMNDC1-203ENST00000460483 DYNC1H1Q14204 4646 aaKnown RBP6.83□□□□□ -1.32
SMNDC1-203ENST00000460483 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
SMNDC1-203ENST00000460483 ZNF73O43830 326 aaPredicted RBP6.83□□□□□ -1.32
SMNDC1-203ENST00000460483 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
SMNDC1-203ENST00000460483 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
SMNDC1-203ENST00000460483 H0Y9J4 135 aa6.82□□□□□ -1.32
SMNDC1-203ENST00000460483 IGLV7-43P04211 117 aa6.82□□□□□ -1.32
SMNDC1-203ENST00000460483 SPINK6Q6UWN8 80 aa6.82□□□□□ -1.32
SMNDC1-203ENST00000460483 FAM19A1Q7Z5A9 133 aa6.82□□□□□ -1.32
SMNDC1-203ENST00000460483 Q8NDZ9 215 aa6.82□□□□□ -1.32
SMNDC1-203ENST00000460483 PRO1854Q9UHT4 67 aa6.82□□□□□ -1.32
SMNDC1-203ENST00000460483 ZNF861PO60384 105 aa6.81□□□□□ -1.32
SMNDC1-203ENST00000460483 CTAG1AP78358 180 aa6.81□□□□□ -1.32
SMNDC1-203ENST00000460483 Q1RN00 199 aa6.81□□□□□ -1.32
SMNDC1-203ENST00000460483 BVES-AS1Q5T3Y7 98 aa6.81□□□□□ -1.32
SMNDC1-203ENST00000460483 NHP2Q9NX24 153 aaKnown RBP6.81□□□□□ -1.32
SMNDC1-203ENST00000460483 SLC25A20O43772 301 aa6.8□□□□□ -1.32
SMNDC1-203ENST00000460483 COX6CP09669 75 aa6.8□□□□□ -1.32
SMNDC1-203ENST00000460483 CFC1BP0CG36 223 aa6.8□□□□□ -1.32
SMNDC1-203ENST00000460483 CFC1P0CG37 223 aa6.8□□□□□ -1.32
SMNDC1-203ENST00000460483 SPRR1AP35321 89 aa6.8□□□□□ -1.32
SMNDC1-203ENST00000460483 RPL13AP40429 203 aaKnown RBP6.8□□□□□ -1.32
SMNDC1-203ENST00000460483 A0A1B0GWB2 263 aa6.79□□□□□ -1.32
SMNDC1-203ENST00000460483 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
SMNDC1-203ENST00000460483 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
SMNDC1-203ENST00000460483 ZNF706Q9Y5V0 76 aaPredicted RBP6.79□□□□□ -1.32
SMNDC1-203ENST00000460483 FXYD2P54710 66 aa6.78□□□□□ -1.32
SMNDC1-203ENST00000460483 C6orf99Q4VX62 202 aa6.78□□□□□ -1.32
SMNDC1-203ENST00000460483 H0YGX0 51 aa6.77□□□□□ -1.33
SMNDC1-203ENST00000460483 COX7BP24311 80 aa6.77□□□□□ -1.33
SMNDC1-203ENST00000460483 Q6ZRX8 168 aa6.77□□□□□ -1.33
SMNDC1-203ENST00000460483 SMIM11BQ8TCY0 68 aa6.77□□□□□ -1.33
SMNDC1-203ENST00000460483 B5MCH6 92 aa6.76□□□□□ -1.33
SMNDC1-203ENST00000460483 H7C2G1 150 aa6.76□□□□□ -1.33
SMNDC1-203ENST00000460483 HIGD2AQ9BW72 106 aa6.76□□□□□ -1.33
SMNDC1-203ENST00000460483 DNAH8Q96JB1 4490 aa6.75□□□□□ -1.33
SMNDC1-203ENST00000460483 PSMB2P49721 201 aa6.75□□□□□ -1.33
SMNDC1-203ENST00000460483 ELOF1P60002 83 aaKnown RBP6.75□□□□□ -1.33
SMNDC1-203ENST00000460483 KRTAP11-1Q8IUC1 163 aa6.75□□□□□ -1.33
SMNDC1-203ENST00000460483 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
SMNDC1-203ENST00000460483 PRLHP81277 87 aa6.74□□□□□ -1.33
SMNDC1-203ENST00000460483 LYRM7Q5U5X0 104 aa6.74□□□□□ -1.33
SMNDC1-203ENST00000460483 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
SMNDC1-203ENST00000460483 APOBP04114 4563 aaKnown RBP6.74□□□□□ -1.33
SMNDC1-203ENST00000460483 BATFQ16520 125 aa6.73□□□□□ -1.33
SMNDC1-203ENST00000460483 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
SMNDC1-203ENST00000460483 A0A1B0GX51 115 aa6.71□□□□□ -1.34
SMNDC1-203ENST00000460483 SCGB1C2P0DMR2 95 aa6.71□□□□□ -1.34
SMNDC1-203ENST00000460483 KRTAP10-4P60372 401 aaPredicted RBP6.71□□□□□ -1.34
SMNDC1-203ENST00000460483 KIAA1109Q2LD37 5005 aa6.71□□□□□ -1.34
SMNDC1-203ENST00000460483 hADV29S1A0JD25 119 aa6.7□□□□□ -1.34
SMNDC1-203ENST00000460483 OCIAD2Q56VL3 154 aa6.7□□□□□ -1.34
SMNDC1-203ENST00000460483 SMCR5Q8TEV8 140 aa6.7□□□□□ -1.34
SMNDC1-203ENST00000460483 PCP4L1A6NKN8 68 aa6.69□□□□□ -1.34
SMNDC1-203ENST00000460483 H3BQ85 93 aa6.69□□□□□ -1.34
SMNDC1-203ENST00000460483 K7ERJ3 54 aa6.69□□□□□ -1.34
SMNDC1-203ENST00000460483 RYR1P21817 5038 aa6.68□□□□□ -1.34
SMNDC1-203ENST00000460483 TSPAN13O95857 204 aa6.68□□□□□ -1.34
SMNDC1-203ENST00000460483 DNAL4O96015 105 aa6.68□□□□□ -1.34
SMNDC1-203ENST00000460483 OXTP01178 125 aa6.68□□□□□ -1.34
SMNDC1-203ENST00000460483 COL5A1-AS1Q5SY13 56 aa6.68□□□□□ -1.34
SMNDC1-203ENST00000460483 LINC00575Q6W349 94 aa6.68□□□□□ -1.34
SMNDC1-203ENST00000460483 FAM229BQ4G0N7 80 aa6.67□□□□□ -1.34
SMNDC1-203ENST00000460483 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.67□□□□□ -1.34
SMNDC1-203ENST00000460483 PPDPFLQ8WWR9 84 aa6.67□□□□□ -1.34
SMNDC1-203ENST00000460483 Q9BRP9 147 aa6.67□□□□□ -1.34
SMNDC1-203ENST00000460483 HSPG2P98160 4391 aa6.66□□□□□ -1.34
SMNDC1-203ENST00000460483 TRIAP1O43715 76 aa6.66□□□□□ -1.34
SMNDC1-203ENST00000460483 CRYGAP11844 174 aa6.66□□□□□ -1.34
SMNDC1-203ENST00000460483 TRBV20-1A0A075B6N2 111 aa6.65□□□□□ -1.34
SMNDC1-203ENST00000460483 TEX49A0A1B0GTD5 131 aa6.65□□□□□ -1.34
SMNDC1-203ENST00000460483 SPRR4Q96PI1 79 aa6.65□□□□□ -1.34
SMNDC1-203ENST00000460483 GAGE2AQ6NT46 116 aa6.64□□□□□ -1.35
SMNDC1-203ENST00000460483 LAMTOR3Q9UHA4 124 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms