RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 SCGB1D4Q6XE38 83 aa9.66□□□□□ -0.86
SMARCD3-204ENST00000460431 PCP2Q8IVA1 136 aa9.66□□□□□ -0.86
SMARCD3-204ENST00000460431 SMCR5Q8TEV8 140 aa9.66□□□□□ -0.86
SMARCD3-204ENST00000460431 SPRR4Q96PI1 79 aa9.66□□□□□ -0.86
SMARCD3-204ENST00000460431 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
SMARCD3-204ENST00000460431 TRAV23DV6A0A075B6W5 121 aa9.64□□□□□ -0.87
SMARCD3-204ENST00000460431 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
SMARCD3-204ENST00000460431 ZNF706Q9Y5V0 76 aaPredicted RBP9.64□□□□□ -0.87
SMARCD3-204ENST00000460431 Q6ZRX8 168 aa9.63□□□□□ -0.87
SMARCD3-204ENST00000460431 ZNF73O43830 326 aaPredicted RBP9.62□□□□□ -0.87
SMARCD3-204ENST00000460431 LINC00518Q8N0U6 118 aa9.62□□□□□ -0.87
SMARCD3-204ENST00000460431 PPDPFQ9H3Y8 114 aa9.62□□□□□ -0.87
SMARCD3-204ENST00000460431 CBY1Q9Y3M2 126 aa9.62□□□□□ -0.87
SMARCD3-204ENST00000460431 RNF213Q63HN8 5207 aa9.62□□□□□ -0.87
SMARCD3-204ENST00000460431 IFITM1P13164 125 aa9.61□□□□□ -0.87
SMARCD3-204ENST00000460431 Q6ZVH6 145 aa9.61□□□□□ -0.87
SMARCD3-204ENST00000460431 Q9BRP9 147 aa9.61□□□□□ -0.87
SMARCD3-204ENST00000460431 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
SMARCD3-204ENST00000460431 TSPAN13O95857 204 aa9.6□□□□□ -0.87
SMARCD3-204ENST00000460431 OR13C6PQ8NH95 151 aa9.6□□□□□ -0.87
SMARCD3-204ENST00000460431 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
SMARCD3-204ENST00000460431 HSBP1L1C9JCN9 74 aa9.59□□□□□ -0.87
SMARCD3-204ENST00000460431 JOSD1Q15040 202 aaPredicted RBP9.59□□□□□ -0.87
SMARCD3-204ENST00000460431 C3orf22Q8N5N4 141 aa9.59□□□□□ -0.87
SMARCD3-204ENST00000460431 LINC00483Q53H64 154 aa9.58□□□□□ -0.88
SMARCD3-204ENST00000460431 LINC00304Q8N9R0 145 aa9.58□□□□□ -0.88
SMARCD3-204ENST00000460431 SCGB1D1O95968 90 aa9.57□□□□□ -0.88
SMARCD3-204ENST00000460431 HINT1P49773 126 aaPredicted RBP9.57□□□□□ -0.88
SMARCD3-204ENST00000460431 MUSTN1Q8IVN3 82 aa9.57□□□□□ -0.88
SMARCD3-204ENST00000460431 LPAP08519 4548 aa9.56□□□□□ -0.88
SMARCD3-204ENST00000460431 GAGE2AQ6NT46 116 aa9.55□□□□□ -0.88
SMARCD3-204ENST00000460431 CTAG1AP78358 180 aa9.54□□□□□ -0.88
SMARCD3-204ENST00000460431 PRR4Q16378 134 aa9.52□□□□□ -0.89
SMARCD3-204ENST00000460431 C6orf99Q4VX62 202 aa9.51□□□□□ -0.89
SMARCD3-204ENST00000460431 SPAG11AQ6PDA7 123 aa9.5□□□□□ -0.89
SMARCD3-204ENST00000460431 DHRS4-AS1Q9P1J3 65 aa9.5□□□□□ -0.89
SMARCD3-204ENST00000460431 A6NDN8 102 aa9.49□□□□□ -0.89
SMARCD3-204ENST00000460431 COX7BP24311 80 aa9.49□□□□□ -0.89
SMARCD3-204ENST00000460431 ELOF1P60002 83 aaKnown RBP9.49□□□□□ -0.89
SMARCD3-204ENST00000460431 TRBV7-6A0A0J9YX20 115 aa9.48□□□□□ -0.89
SMARCD3-204ENST00000460431 COX8AP10176 69 aa9.48□□□□□ -0.89
SMARCD3-204ENST00000460431 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
SMARCD3-204ENST00000460431 Q8NBF4 154 aa9.48□□□□□ -0.89
SMARCD3-204ENST00000460431 TRAV13-2A0A0B4J235 113 aa9.47□□□□□ -0.89
SMARCD3-204ENST00000460431 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
SMARCD3-204ENST00000460431 SSBP3-AS1Q7Z2R9 100 aa9.46□□□□□ -0.9
SMARCD3-204ENST00000460431 IGLV9-49A0A0B4J1Y8 123 aa9.45□□□□□ -0.9
SMARCD3-204ENST00000460431 DLEU1O43261 78 aa9.45□□□□□ -0.9
SMARCD3-204ENST00000460431 MOBPQ13875 183 aa9.45□□□□□ -0.9
SMARCD3-204ENST00000460431 A0A1B0GWB2 263 aa9.44□□□□□ -0.9
SMARCD3-204ENST00000460431 A4D1N5 150 aa9.44□□□□□ -0.9
SMARCD3-204ENST00000460431 SPRR1BP22528 89 aa9.44□□□□□ -0.9
SMARCD3-204ENST00000460431 RETNLBQ9BQ08 111 aa9.44□□□□□ -0.9
SMARCD3-204ENST00000460431 SMIM11BQ8TCY0 68 aa9.43□□□□□ -0.9
SMARCD3-204ENST00000460431 SPINK1P00995 79 aa9.42□□□□□ -0.9
SMARCD3-204ENST00000460431 SPATA45Q537H7 98 aa9.41□□□□□ -0.9
SMARCD3-204ENST00000460431 C14orf144Q96I85 54 aa9.41□□□□□ -0.9
SMARCD3-204ENST00000460431 HIST1H4GQ99525 98 aa9.41□□□□□ -0.9
SMARCD3-204ENST00000460431 PAM16Q9Y3D7 125 aa9.41□□□□□ -0.9
SMARCD3-204ENST00000460431 SLC25A34Q6PIV7 304 aa9.39□□□□□ -0.91
SMARCD3-204ENST00000460431 VAMP8Q9BV40 100 aa9.39□□□□□ -0.91
SMARCD3-204ENST00000460431 TAL2Q16559 108 aa9.38□□□□□ -0.91
SMARCD3-204ENST00000460431 C9orf153Q5TBE3 101 aa9.38□□□□□ -0.91
SMARCD3-204ENST00000460431 RPS29P62273 56 aaKnown RBP9.37□□□□□ -0.91
SMARCD3-204ENST00000460431 HIGD1BQ9P298 99 aa9.37□□□□□ -0.91
SMARCD3-204ENST00000460431 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
SMARCD3-204ENST00000460431 TEX49A0A1B0GTD5 131 aa9.36□□□□□ -0.91
SMARCD3-204ENST00000460431 DEFB105AQ8NG35 78 aa9.36□□□□□ -0.91
SMARCD3-204ENST00000460431 LAMTOR3Q9UHA4 124 aa9.36□□□□□ -0.91
SMARCD3-204ENST00000460431 VAMP3Q15836 100 aa9.35□□□□□ -0.91
SMARCD3-204ENST00000460431 NHP2Q9NX24 153 aaKnown RBP9.35□□□□□ -0.91
SMARCD3-204ENST00000460431 IGLV5-48A0A075B6I7 105 aa9.34□□□□□ -0.91
SMARCD3-204ENST00000460431 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
SMARCD3-204ENST00000460431 C2orf91Q6ZV80 131 aa9.34□□□□□ -0.91
SMARCD3-204ENST00000460431 PYY3Q5JQD4 70 aa9.33□□□□□ -0.92
SMARCD3-204ENST00000460431 FP248Q71RG6 208 aaPredicted RBP9.33□□□□□ -0.92
SMARCD3-204ENST00000460431 C12orf57Q99622 126 aa9.33□□□□□ -0.92
SMARCD3-204ENST00000460431 TPRXLQ17RH7 258 aa9.32□□□□□ -0.92
SMARCD3-204ENST00000460431 SMIM29Q86T20 159 aa9.32□□□□□ -0.92
SMARCD3-204ENST00000460431 Q8N377 158 aa9.32□□□□□ -0.92
SMARCD3-204ENST00000460431 TMA7Q9Y2S6 64 aaKnown RBP9.32□□□□□ -0.92
SMARCD3-204ENST00000460431 SLC25A20O43772 301 aa9.31□□□□□ -0.92
SMARCD3-204ENST00000460431 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
SMARCD3-204ENST00000460431 CFC1P0CG37 223 aa9.31□□□□□ -0.92
SMARCD3-204ENST00000460431 Q1RN00 199 aa9.31□□□□□ -0.92
SMARCD3-204ENST00000460431 LINC00575Q6W349 94 aa9.31□□□□□ -0.92
SMARCD3-204ENST00000460431 MUC2Q02817 5179 aa9.28□□□□□ -0.92
SMARCD3-204ENST00000460431 hADV29S1A0JD25 119 aa9.27□□□□□ -0.93
SMARCD3-204ENST00000460431 A0A0B4J2C4 111 aa9.26□□□□□ -0.93
SMARCD3-204ENST00000460431 BVES-AS1Q5T3Y7 98 aa9.26□□□□□ -0.93
SMARCD3-204ENST00000460431 CEND1Q8N111 149 aa9.26□□□□□ -0.93
SMARCD3-204ENST00000460431 RAB37Q96AX2 223 aa9.26□□□□□ -0.93
SMARCD3-204ENST00000460431 CDIP1Q9H305 208 aa9.26□□□□□ -0.93
SMARCD3-204ENST00000460431 PRO1933Q9H354 126 aa9.26□□□□□ -0.93
SMARCD3-204ENST00000460431 H7C2G1 150 aa9.24□□□□□ -0.93
SMARCD3-204ENST00000460431 CD164Q04900 197 aa9.24□□□□□ -0.93
SMARCD3-204ENST00000460431 HRCT1Q6UXD1 115 aa9.24□□□□□ -0.93
SMARCD3-204ENST00000460431 Q6ZQY7 126 aa9.24□□□□□ -0.93
SMARCD3-204ENST00000460431 KRTAP13-3Q3SY46 172 aa9.23□□□□□ -0.93
SMARCD3-204ENST00000460431 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms