RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 CRIPTQ9P021 101 aa1.39□□□□□ -2.19
VPS8-215ENST00000460158 NFAT5O94916 1531 aa1.39□□□□□ -2.19
VPS8-215ENST00000460158 IGIPA6NJ69 53 aa1.38□□□□□ -2.19
VPS8-215ENST00000460158 USMG5Q96IX5 58 aa1.38□□□□□ -2.19
VPS8-215ENST00000460158 TIMM8BQ9Y5J9 83 aaPredicted RBP1.38□□□□□ -2.19
VPS8-215ENST00000460158 DEFB131BA0A096LNP1 70 aa1.37□□□□□ -2.19
VPS8-215ENST00000460158 PIGYQ3MUY2 71 aa1.37□□□□□ -2.19
VPS8-215ENST00000460158 DEFB119Q8N690 84 aa1.37□□□□□ -2.19
VPS8-215ENST00000460158 KIF21BO75037 1637 aa1.37□□□□□ -2.19
VPS8-215ENST00000460158 ANKRD17O75179 2603 aaKnown RBP1.36□□□□□ -2.19
VPS8-215ENST00000460158 ATP7AQ04656 1500 aa1.36□□□□□ -2.19
VPS8-215ENST00000460158 H0YGX0 51 aa1.36□□□□□ -2.19
VPS8-215ENST00000460158 COX6B1P14854 86 aa1.36□□□□□ -2.19
VPS8-215ENST00000460158 KRTAP12-1P59990 96 aa1.36□□□□□ -2.19
VPS8-215ENST00000460158 TP53AIP1Q9HCN2 124 aa1.36□□□□□ -2.19
VPS8-215ENST00000460158 LMO7Q8WWI1 1683 aa1.35□□□□□ -2.19
VPS8-215ENST00000460158 CNTRLQ7Z7A1 2325 aa1.35□□□□□ -2.19
VPS8-215ENST00000460158 BPTFQ12830 3046 aa1.35□□□□□ -2.19
VPS8-215ENST00000460158 CNOT1A5YKK6 2376 aaKnown RBP1.35□□□□□ -2.19
VPS8-215ENST00000460158 K7EIL1 84 aa1.34□□□□□ -2.19
VPS8-215ENST00000460158 SPINK4O60575 86 aa1.34□□□□□ -2.19
VPS8-215ENST00000460158 COL6A6A6NMZ7 2263 aa1.34□□□□□ -2.2
VPS8-215ENST00000460158 PLCE1Q9P212 2302 aa1.34□□□□□ -2.2
VPS8-215ENST00000460158 CACNA1EQ15878 2313 aa1.33□□□□□ -2.2
VPS8-215ENST00000460158 GCC2Q8IWJ2 1684 aa1.33□□□□□ -2.2
VPS8-215ENST00000460158 LINC01546A6NGU7 62 aa1.33□□□□□ -2.2
VPS8-215ENST00000460158 MROH2BQ7Z745 1585 aa1.33□□□□□ -2.2
VPS8-215ENST00000460158 SAMD9LQ8IVG5 1584 aa1.33□□□□□ -2.2
VPS8-215ENST00000460158 CCL22O00626 93 aa1.32□□□□□ -2.2
VPS8-215ENST00000460158 CRIP1P50238 77 aa1.32□□□□□ -2.2
VPS8-215ENST00000460158 MRPL34Q9BQ48 92 aaKnown RBP1.32□□□□□ -2.2
VPS8-215ENST00000460158 FAM208BQ5VWN6 2430 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 SORL1Q92673 2214 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 I3L2K1 104 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 K7EQZ3 153 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 NDUFA3O95167 84 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 CNFNQ9BYD5 112 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 TMEM167BQ9NRX6 74 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 CDKN2A-AS1Q9UH64 79 aa1.31□□□□□ -2.2
VPS8-215ENST00000460158 LYNX1P0DP58 116 aa1.3□□□□□ -2.2
VPS8-215ENST00000460158 LINC00158P58513 81 aa1.3□□□□□ -2.2
VPS8-215ENST00000460158 COX6B2Q6YFQ2 88 aa1.3□□□□□ -2.2
VPS8-215ENST00000460158 Q8IZM0 81 aa1.29□□□□□ -2.2
VPS8-215ENST00000460158 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
VPS8-215ENST00000460158 PRO0255Q9UI72 69 aa1.29□□□□□ -2.2
VPS8-215ENST00000460158 OTOGLQ3ZCN5 2332 aa1.29□□□□□ -2.2
VPS8-215ENST00000460158 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.29□□□□□ -2.2
VPS8-215ENST00000460158 SPINK9Q5DT21 86 aa1.28□□□□□ -2.2
VPS8-215ENST00000460158 PRO3102Q9H379 93 aa1.28□□□□□ -2.2
VPS8-215ENST00000460158 DUOX1Q9NRD9 1551 aa1.28□□□□□ -2.2
VPS8-215ENST00000460158 JMJD1CQ15652 2540 aa1.28□□□□□ -2.2
VPS8-215ENST00000460158 J3QKU1 62 aa1.27□□□□□ -2.21
VPS8-215ENST00000460158 SNRPGP62308 76 aaKnown RBP1.27□□□□□ -2.21
VPS8-215ENST00000460158 COX6A2Q02221 97 aa1.27□□□□□ -2.21
VPS8-215ENST00000460158 PTPRQQ9UMZ3 2332 aa1.26□□□□□ -2.21
VPS8-215ENST00000460158 LINC00308Q8TCZ7 52 aa1.26□□□□□ -2.21
VPS8-215ENST00000460158 USF3Q68DE3 2245 aa1.25□□□□□ -2.21
VPS8-215ENST00000460158 MINOS1Q5TGZ0 78 aa1.25□□□□□ -2.21
VPS8-215ENST00000460158 PTPRZ1P23471 2315 aaPredicted RBP1.24□□□□□ -2.21
VPS8-215ENST00000460158 LYNX1G3V0Z9 82 aa1.24□□□□□ -2.21
VPS8-215ENST00000460158 CLTCL1P53675 1640 aa1.24□□□□□ -2.21
VPS8-215ENST00000460158 ROS1P08922 2347 aa1.23□□□□□ -2.21
VPS8-215ENST00000460158 LOC730098B7Z3J9 87 aa1.23□□□□□ -2.21
VPS8-215ENST00000460158 KRTAP4-1Q9BYQ7 146 aa1.23□□□□□ -2.21
VPS8-215ENST00000460158 RP1L1Q8IWN7 2480 aaPredicted RBP1.22□□□□□ -2.21
VPS8-215ENST00000460158 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
VPS8-215ENST00000460158 Q6ZSA8 131 aa1.22□□□□□ -2.21
VPS8-215ENST00000460158 C6orf48Q9UBA6 75 aa1.22□□□□□ -2.21
VPS8-215ENST00000460158 APLNQ9ULZ1 77 aa1.22□□□□□ -2.21
VPS8-215ENST00000460158 TFF3Q07654 80 aa1.21□□□□□ -2.22
VPS8-215ENST00000460158 SMIM2Q9BVW6 85 aa1.21□□□□□ -2.22
VPS8-215ENST00000460158 C10orf95Q9H7T3 257 aa1.21□□□□□ -2.22
VPS8-215ENST00000460158 PIEZO2Q9H5I5 2752 aa1.2□□□□□ -2.22
VPS8-215ENST00000460158 H0YAA0 97 aa1.2□□□□□ -2.22
VPS8-215ENST00000460158 SPRR1AP35321 89 aa1.2□□□□□ -2.22
VPS8-215ENST00000460158 DEFB105AQ8NG35 78 aa1.2□□□□□ -2.22
VPS8-215ENST00000460158 H1FX-AS1Q4G0G2 97 aa1.19□□□□□ -2.22
VPS8-215ENST00000460158 Q5VSD8 79 aa1.19□□□□□ -2.22
VPS8-215ENST00000460158 WFDC13Q8IUB5 93 aa1.19□□□□□ -2.22
VPS8-215ENST00000460158 PKDREJQ9NTG1 2253 aa1.18□□□□□ -2.22
VPS8-215ENST00000460158 IAPPP10997 89 aa1.18□□□□□ -2.22
VPS8-215ENST00000460158 LELP1Q5T871 98 aa1.18□□□□□ -2.22
VPS8-215ENST00000460158 C2CD3Q4AC94 2353 aa1.18□□□□□ -2.22
VPS8-215ENST00000460158 NDUFA1O15239 70 aa1.17□□□□□ -2.22
VPS8-215ENST00000460158 MUC6Q6W4X9 2439 aa1.16□□□□□ -2.22
VPS8-215ENST00000460158 A0A0D9SG42 100 aa1.16□□□□□ -2.22
VPS8-215ENST00000460158 SPRR1BP22528 89 aa1.16□□□□□ -2.22
VPS8-215ENST00000460158 ASH1LQ9NR48 2969 aaKnown RBP1.16□□□□□ -2.22
VPS8-215ENST00000460158 ALMS1Q8TCU4 4167 aa1.14□□□□□ -2.23
VPS8-215ENST00000460158 DEFB130BP0DP73 79 aa1.14□□□□□ -2.23
VPS8-215ENST00000460158 DEFB130AP0DP74 79 aa1.14□□□□□ -2.23
VPS8-215ENST00000460158 WNK2Q9Y3S1 2297 aa1.14□□□□□ -2.23
VPS8-215ENST00000460158 RPS27P42677 84 aaKnown RBP1.13□□□□□ -2.23
VPS8-215ENST00000460158 KLK9Q2XQG4 91 aa1.13□□□□□ -2.23
VPS8-215ENST00000460158 RPS27LQ71UM5 84 aaKnown RBP1.13□□□□□ -2.23
VPS8-215ENST00000460158 ZNF462Q96JM2 2506 aa1.13□□□□□ -2.23
VPS8-215ENST00000460158 KRTAP21-3Q3LHN1 58 aa1.12□□□□□ -2.23
VPS8-215ENST00000460158 WFDC10BQ8IUB3 73 aa1.12□□□□□ -2.23
VPS8-215ENST00000460158 KNL1Q8NG31 2342 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms