RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 FLNAP21333 2647 aaKnown RBP5.74□□□□□ -1.49
VPS50-208ENST00000458707 ANGP03950 147 aaKnown RBP5.74□□□□□ -1.49
VPS50-208ENST00000458707 IGLV10-54A0A075B6I4 117 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 LINC01547P58512 204 aaPredicted RBP5.73□□□□□ -1.49
VPS50-208ENST00000458707 KRTAP1-1Q07627 177 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 C10orf25Q5T742 122 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 C11orf45Q8TAV5 145 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 CCDC168Q8NDH2 2452 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 GVQW2A0A096LPI5 108 aaPredicted RBP5.73□□□□□ -1.49
VPS50-208ENST00000458707 CXCL6P80162 114 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 UNQ6190/PRO20217Q6UXQ8 127 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 Q6ZVQ6 151 aa5.73□□□□□ -1.49
VPS50-208ENST00000458707 STAB1Q9NY15 2570 aa5.72□□□□□ -1.49
VPS50-208ENST00000458707 M0R2N4 97 aa5.72□□□□□ -1.49
VPS50-208ENST00000458707 SPAG11BQ08648 103 aa5.72□□□□□ -1.49
VPS50-208ENST00000458707 KTN1-AS1Q86SY8 53 aa5.72□□□□□ -1.49
VPS50-208ENST00000458707 PRR34Q9NV39 138 aa5.71□□□□□ -1.5
VPS50-208ENST00000458707 TRBV7-4A0A0J9YYF1 115 aa5.71□□□□□ -1.5
VPS50-208ENST00000458707 APOC4P55056 127 aa5.71□□□□□ -1.5
VPS50-208ENST00000458707 Q6ZQY7 126 aa5.71□□□□□ -1.5
VPS50-208ENST00000458707 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.7□□□□□ -1.5
VPS50-208ENST00000458707 F8WEM9 126 aa5.69□□□□□ -1.5
VPS50-208ENST00000458707 DAD1P61803 113 aa5.69□□□□□ -1.5
VPS50-208ENST00000458707 Q1T7F1 81 aa5.69□□□□□ -1.5
VPS50-208ENST00000458707 LELP1Q5T871 98 aa5.69□□□□□ -1.5
VPS50-208ENST00000458707 DIRC1Q969H9 104 aa5.69□□□□□ -1.5
VPS50-208ENST00000458707 NDUFS5O43920 106 aa5.68□□□□□ -1.5
VPS50-208ENST00000458707 HAMPP81172 84 aa5.68□□□□□ -1.5
VPS50-208ENST00000458707 TRAV10A0A0B4J240 114 aa5.68□□□□□ -1.5
VPS50-208ENST00000458707 H3BS24 57 aa5.68□□□□□ -1.5
VPS50-208ENST00000458707 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
VPS50-208ENST00000458707 KRTAP10-3P60369 221 aa5.68□□□□□ -1.5
VPS50-208ENST00000458707 ESRGQ1W209 222 aa5.68□□□□□ -1.5
VPS50-208ENST00000458707 C6orf48Q9UBA6 75 aa5.68□□□□□ -1.5
VPS50-208ENST00000458707 ZNF73O43830 326 aaPredicted RBP5.67□□□□□ -1.5
VPS50-208ENST00000458707 NBEAL2Q6ZNJ1 2754 aa5.67□□□□□ -1.5
VPS50-208ENST00000458707 ERC2-IT1O76042 136 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 COX7BP24311 80 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 DEFB135Q30KP9 77 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 LINC00588Q9Y4M8 146 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
VPS50-208ENST00000458707 M0R378 163 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 DEFB4AO15263 64 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 MIFP14174 115 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 FAM229BQ4G0N7 80 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 PHF5AQ7RTV0 110 aaKnown RBP5.66□□□□□ -1.5
VPS50-208ENST00000458707 Q8NAQ8 132 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 CELA1Q9UNI1 258 aa5.66□□□□□ -1.5
VPS50-208ENST00000458707 KLK12Q9UKR0 248 aa5.65□□□□□ -1.5
VPS50-208ENST00000458707 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.65□□□□□ -1.5
VPS50-208ENST00000458707 COL6A5A8TX70 2615 aa5.65□□□□□ -1.51
VPS50-208ENST00000458707 VPREB1P12018 145 aa5.64□□□□□ -1.51
VPS50-208ENST00000458707 MPLKIPQ8TAP9 179 aa5.64□□□□□ -1.51
VPS50-208ENST00000458707 ACANP16112 2415 aa5.64□□□□□ -1.51
VPS50-208ENST00000458707 C8orf87E5RJ46 101 aa5.64□□□□□ -1.51
VPS50-208ENST00000458707 RMI2Q96E14 147 aa5.64□□□□□ -1.51
VPS50-208ENST00000458707 XAGE1AQ9HD64 81 aa5.64□□□□□ -1.51
VPS50-208ENST00000458707 SPART-AS1P0CW21 52 aa5.63□□□□□ -1.51
VPS50-208ENST00000458707 EGFEM1PQ0D2K5 195 aa5.62□□□□□ -1.51
VPS50-208ENST00000458707 SNURFQ9Y675 71 aa5.62□□□□□ -1.51
VPS50-208ENST00000458707 KRTAP26-1Q6PEX3 210 aa5.62□□□□□ -1.51
VPS50-208ENST00000458707 VWFP04275 2813 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 KRTAP9-7A8MTY7 169 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 UBE2BP63146 152 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 NREPQ16612 68 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 Q6ZTC4 211 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 SCXQ7RTU7 201 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 HIVEP2P31629 2446 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 BPY2O14599 106 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 CAMK2N2Q96S95 79 aa5.6□□□□□ -1.51
VPS50-208ENST00000458707 IGKV4-1P06312 121 aa5.59□□□□□ -1.51
VPS50-208ENST00000458707 HTN3P15516 51 aa5.59□□□□□ -1.51
VPS50-208ENST00000458707 PRR26Q8N8Z3 221 aa5.59□□□□□ -1.51
VPS50-208ENST00000458707 H3BNG1 76 aa5.58□□□□□ -1.52
VPS50-208ENST00000458707 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
VPS50-208ENST00000458707 TMEM254Q8TBM7 123 aa5.58□□□□□ -1.52
VPS50-208ENST00000458707 NOTCH1P46531 2555 aa5.58□□□□□ -1.52
VPS50-208ENST00000458707 HIGD2BQ4VC39 106 aa5.58□□□□□ -1.52
VPS50-208ENST00000458707 OCR1Q9BZK8 76 aa5.58□□□□□ -1.52
VPS50-208ENST00000458707 hDV103S1A0JD37 113 aa5.57□□□□□ -1.52
VPS50-208ENST00000458707 LCE5AQ5TCM9 118 aa5.57□□□□□ -1.52
VPS50-208ENST00000458707 A0A1B0GW54 56 aa5.56□□□□□ -1.52
VPS50-208ENST00000458707 Q6ZRP5 223 aa5.56□□□□□ -1.52
VPS50-208ENST00000458707 LCA10Q71F78 164 aa5.56□□□□□ -1.52
VPS50-208ENST00000458707 WFDC10BQ8IUB3 73 aa5.56□□□□□ -1.52
VPS50-208ENST00000458707 KCNQ1DNQ9H478 68 aa5.56□□□□□ -1.52
VPS50-208ENST00000458707 IGLV5-48A0A075B6I7 105 aa5.56□□□□□ -1.52
VPS50-208ENST00000458707 ATP11AUNQ6ZP68 121 aa5.56□□□□□ -1.52
VPS50-208ENST00000458707 A6NN06 94 aa5.54□□□□□ -1.52
VPS50-208ENST00000458707 FUSP35637 526 aaKnown RBP eCLIP5.54□□□□□ -1.52
VPS50-208ENST00000458707 Q8N9L7 120 aa5.54□□□□□ -1.52
VPS50-208ENST00000458707 SYCNQ0VAF6 134 aa5.54□□□□□ -1.52
VPS50-208ENST00000458707 KPRPQ5T749 579 aaPredicted RBP5.54□□□□□ -1.52
VPS50-208ENST00000458707 Q8N377 158 aa5.54□□□□□ -1.52
VPS50-208ENST00000458707 PRYO14603 147 aa5.53□□□□□ -1.52
VPS50-208ENST00000458707 SMR3AQ99954 134 aa5.53□□□□□ -1.52
VPS50-208ENST00000458707 PKD1L1Q8TDX9 2849 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms