RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SPANXDQ9BXN6 97 aa6.09□□□□□ -1.43
ATG4A-206ENST00000457035 TMEM126AQ9H061 195 aa6.09□□□□□ -1.43
ATG4A-206ENST00000457035 SPANXCQ9NY87 97 aa6.09□□□□□ -1.43
ATG4A-206ENST00000457035 TRBV10-3A0A0K0K1G6 114 aa6.08□□□□□ -1.44
ATG4A-206ENST00000457035 REG3GQ6UW15 175 aa6.08□□□□□ -1.44
ATG4A-206ENST00000457035 Q6ZVH6 145 aa6.08□□□□□ -1.44
ATG4A-206ENST00000457035 KRTAP13-1Q8IUC0 172 aa6.08□□□□□ -1.44
ATG4A-206ENST00000457035 DIRC1Q969H9 104 aa6.08□□□□□ -1.44
ATG4A-206ENST00000457035 KCNQ1DNQ9H478 68 aa6.08□□□□□ -1.44
ATG4A-206ENST00000457035 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
ATG4A-206ENST00000457035 H0Y9J4 135 aa6.07□□□□□ -1.44
ATG4A-206ENST00000457035 COX8AP10176 69 aa6.07□□□□□ -1.44
ATG4A-206ENST00000457035 SPRR1AP35321 89 aa6.07□□□□□ -1.44
ATG4A-206ENST00000457035 PYY3Q5JQD4 70 aa6.07□□□□□ -1.44
ATG4A-206ENST00000457035 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
ATG4A-206ENST00000457035 PPDPFQ9H3Y8 114 aa6.07□□□□□ -1.44
ATG4A-206ENST00000457035 IGLV6-57P01721 117 aa6.06□□□□□ -1.44
ATG4A-206ENST00000457035 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
ATG4A-206ENST00000457035 IFITM1P13164 125 aa6.06□□□□□ -1.44
ATG4A-206ENST00000457035 RPL28P46779 137 aaKnown RBP6.06□□□□□ -1.44
ATG4A-206ENST00000457035 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
ATG4A-206ENST00000457035 MUSTN1Q8IVN3 82 aa6.06□□□□□ -1.44
ATG4A-206ENST00000457035 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
ATG4A-206ENST00000457035 KRTAP4-2Q9BYR5 136 aa6.06□□□□□ -1.44
ATG4A-206ENST00000457035 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
ATG4A-206ENST00000457035 PRYO14603 147 aa6.05□□□□□ -1.44
ATG4A-206ENST00000457035 DLEU1O43261 78 aa6.05□□□□□ -1.44
ATG4A-206ENST00000457035 DDTP30046 118 aa6.05□□□□□ -1.44
ATG4A-206ENST00000457035 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
ATG4A-206ENST00000457035 FAM19A1Q7Z5A9 133 aa6.05□□□□□ -1.44
ATG4A-206ENST00000457035 PAM16Q9Y3D7 125 aa6.05□□□□□ -1.44
ATG4A-206ENST00000457035 KRTAP1-4P0C5Y4 121 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 UBE2AP49459 152 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 PRLHP81277 87 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 S100A7L2Q5SY68 101 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 LINC00518Q8N0U6 118 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 C14orf144Q96I85 54 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 VAMP8Q9BV40 100 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
ATG4A-206ENST00000457035 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
ATG4A-206ENST00000457035 LINC00337Q8N6G1 96 aa6.03□□□□□ -1.44
ATG4A-206ENST00000457035 S100A12P80511 92 aa6.01□□□□□ -1.45
ATG4A-206ENST00000457035 TRAV23DV6A0A075B6W5 121 aa6□□□□□ -1.45
ATG4A-206ENST00000457035 ETDCA0A1B0GVM5 59 aa6□□□□□ -1.45
ATG4A-206ENST00000457035 B5MCH6 92 aa6□□□□□ -1.45
ATG4A-206ENST00000457035 SLC25A34Q6PIV7 304 aa6□□□□□ -1.45
ATG4A-206ENST00000457035 OR13C6PQ8NH95 151 aa6□□□□□ -1.45
ATG4A-206ENST00000457035 HIGD1BQ9P298 99 aa6□□□□□ -1.45
ATG4A-206ENST00000457035 ZNF73O43830 326 aaPredicted RBP5.99□□□□□ -1.45
ATG4A-206ENST00000457035 C2orf91Q6ZV80 131 aa5.99□□□□□ -1.45
ATG4A-206ENST00000457035 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
ATG4A-206ENST00000457035 CDIP1Q9H305 208 aa5.99□□□□□ -1.45
ATG4A-206ENST00000457035 A4D1N5 150 aa5.98□□□□□ -1.45
ATG4A-206ENST00000457035 SMCR5Q8TEV8 140 aa5.98□□□□□ -1.45
ATG4A-206ENST00000457035 HIST1H4GQ99525 98 aa5.98□□□□□ -1.45
ATG4A-206ENST00000457035 HIGD2AQ9BW72 106 aa5.98□□□□□ -1.45
ATG4A-206ENST00000457035 CBY1Q9Y3M2 126 aa5.98□□□□□ -1.45
ATG4A-206ENST00000457035 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
ATG4A-206ENST00000457035 TRAV13-2A0A0B4J235 113 aa5.97□□□□□ -1.45
ATG4A-206ENST00000457035 Q6ZRX8 168 aa5.97□□□□□ -1.45
ATG4A-206ENST00000457035 Q9BRP9 147 aa5.97□□□□□ -1.45
ATG4A-206ENST00000457035 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
ATG4A-206ENST00000457035 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.45
ATG4A-206ENST00000457035 A6NDN8 102 aa5.96□□□□□ -1.46
ATG4A-206ENST00000457035 ERC2-IT1O76042 136 aa5.96□□□□□ -1.46
ATG4A-206ENST00000457035 A0A087X002 238 aa5.95□□□□□ -1.46
ATG4A-206ENST00000457035 HINT1P49773 126 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-206ENST00000457035 C6orf99Q4VX62 202 aa5.95□□□□□ -1.46
ATG4A-206ENST00000457035 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
ATG4A-206ENST00000457035 C9orf118A6NHY6 69 aa5.94□□□□□ -1.46
ATG4A-206ENST00000457035 CRYGAP11844 174 aa5.94□□□□□ -1.46
ATG4A-206ENST00000457035 TAL2Q16559 108 aa5.94□□□□□ -1.46
ATG4A-206ENST00000457035 FAM229BQ4G0N7 80 aa5.94□□□□□ -1.46
ATG4A-206ENST00000457035 TRBV7-6A0A0J9YX20 115 aa5.93□□□□□ -1.46
ATG4A-206ENST00000457035 LOC105371267A0A1B0GV96 52 aa5.93□□□□□ -1.46
ATG4A-206ENST00000457035 CFC1BP0CG36 223 aa5.93□□□□□ -1.46
ATG4A-206ENST00000457035 CFC1P0CG37 223 aa5.93□□□□□ -1.46
ATG4A-206ENST00000457035 RPL13AP40429 203 aaKnown RBP5.93□□□□□ -1.46
ATG4A-206ENST00000457035 ELOF1P60002 83 aaKnown RBP5.93□□□□□ -1.46
ATG4A-206ENST00000457035 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
ATG4A-206ENST00000457035 SMIM11BQ8TCY0 68 aa5.93□□□□□ -1.46
ATG4A-206ENST00000457035 COX7BP24311 80 aa5.92□□□□□ -1.46
ATG4A-206ENST00000457035 CEND1Q8N111 149 aa5.92□□□□□ -1.46
ATG4A-206ENST00000457035 C12orf57Q99622 126 aa5.92□□□□□ -1.46
ATG4A-206ENST00000457035 UQCR10Q9UDW1 63 aa5.92□□□□□ -1.46
ATG4A-206ENST00000457035 LINC00483Q53H64 154 aa5.91□□□□□ -1.46
ATG4A-206ENST00000457035 DHRS4-AS1Q9P1J3 65 aa5.91□□□□□ -1.46
ATG4A-206ENST00000457035 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-206ENST00000457035 A0A1B0GWB2 263 aa5.9□□□□□ -1.46
ATG4A-206ENST00000457035 GAGE2AQ6NT46 116 aa5.9□□□□□ -1.46
ATG4A-206ENST00000457035 SMIM6P0DI80 62 aa5.89□□□□□ -1.47
ATG4A-206ENST00000457035 FXYD2P54710 66 aa5.89□□□□□ -1.47
ATG4A-206ENST00000457035 C3orf22Q8N5N4 141 aa5.89□□□□□ -1.47
ATG4A-206ENST00000457035 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
ATG4A-206ENST00000457035 TYMSOSQ8TAI1 123 aa5.89□□□□□ -1.47
ATG4A-206ENST00000457035 A0A0B4J2C4 111 aa5.88□□□□□ -1.47
ATG4A-206ENST00000457035 HSD52Q0P140 79 aa5.88□□□□□ -1.47
ATG4A-206ENST00000457035 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
ATG4A-206ENST00000457035 PRO1933Q9H354 126 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms