RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 K7EP34 96 aa6.93□□□□□ -1.3
SCN9A-205ENST00000454569 NCR3O14931 201 aa6.93□□□□□ -1.3
SCN9A-205ENST00000454569 FAM19A5Q7Z5A7 132 aaPredicted RBP6.93□□□□□ -1.3
SCN9A-205ENST00000454569 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
SCN9A-205ENST00000454569 A0A087WYN8 130 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 SCGB1C2P0DMR2 95 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 C5orf47Q569G3 176 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 KRTAP11-1Q8IUC1 163 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 TRIAP1O43715 76 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 Q6ZSA8 131 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 C22orf24Q9Y442 160 aa6.91□□□□□ -1.3
SCN9A-205ENST00000454569 COX6CP09669 75 aa6.9□□□□□ -1.31
SCN9A-205ENST00000454569 PHF5AQ7RTV0 110 aaKnown RBP6.9□□□□□ -1.31
SCN9A-205ENST00000454569 DPH3Q96FX2 82 aa6.9□□□□□ -1.31
SCN9A-205ENST00000454569 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
SCN9A-205ENST00000454569 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
SCN9A-205ENST00000454569 IGLV5-37A0A075B6J1 123 aa6.88□□□□□ -1.31
SCN9A-205ENST00000454569 TRBV20-1A0A075B6N2 111 aa6.88□□□□□ -1.31
SCN9A-205ENST00000454569 S100A7L2Q5SY68 101 aa6.88□□□□□ -1.31
SCN9A-205ENST00000454569 CIRBP-AS1Q8TBR5 109 aa6.88□□□□□ -1.31
SCN9A-205ENST00000454569 LINC00167Q96N53 147 aa6.88□□□□□ -1.31
SCN9A-205ENST00000454569 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
SCN9A-205ENST00000454569 TRBV10-2A0A0K0K1G8 114 aa6.87□□□□□ -1.31
SCN9A-205ENST00000454569 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
SCN9A-205ENST00000454569 M0QXV9 152 aa6.87□□□□□ -1.31
SCN9A-205ENST00000454569 TCL1BO95988 128 aa6.87□□□□□ -1.31
SCN9A-205ENST00000454569 RPL28P46779 137 aaKnown RBP6.87□□□□□ -1.31
SCN9A-205ENST00000454569 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
SCN9A-205ENST00000454569 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
SCN9A-205ENST00000454569 RYR1P21817 5038 aa6.87□□□□□ -1.31
SCN9A-205ENST00000454569 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 H3BMG7 143 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 XGP55808 180 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 SMIM11BQ8TCY0 68 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 SIGMAR1Q99720 223 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 LINC00474Q9P2X8 69 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 M0R378 163 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 XP32Q5T750 250 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
SCN9A-205ENST00000454569 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
SCN9A-205ENST00000454569 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
SCN9A-205ENST00000454569 IGLV6-57P01721 117 aa6.85□□□□□ -1.31
SCN9A-205ENST00000454569 ATXN8Q156A1 80 aa6.85□□□□□ -1.31
SCN9A-205ENST00000454569 PKIGQ9Y2B9 76 aa6.85□□□□□ -1.31
SCN9A-205ENST00000454569 CLEC2BQ92478 149 aa6.84□□□□□ -1.31
SCN9A-205ENST00000454569 IGLV1-50A0A075B6I6 118 aa6.83□□□□□ -1.32
SCN9A-205ENST00000454569 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
SCN9A-205ENST00000454569 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
SCN9A-205ENST00000454569 SRRM2Q9UQ35 2752 aaKnown RBP6.82□□□□□ -1.32
SCN9A-205ENST00000454569 FAT1Q14517 4588 aa6.82□□□□□ -1.32
SCN9A-205ENST00000454569 TRAV23DV6A0A075B6W5 121 aa6.82□□□□□ -1.32
SCN9A-205ENST00000454569 LST1O00453 97 aa6.82□□□□□ -1.32
SCN9A-205ENST00000454569 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
SCN9A-205ENST00000454569 HSPG2P98160 4391 aa6.82□□□□□ -1.32
SCN9A-205ENST00000454569 H0YGX0 51 aa6.81□□□□□ -1.32
SCN9A-205ENST00000454569 C6orf99Q4VX62 202 aa6.81□□□□□ -1.32
SCN9A-205ENST00000454569 F8W1H4 67 aa6.8□□□□□ -1.32
SCN9A-205ENST00000454569 KCNQ1DNQ9H478 68 aa6.8□□□□□ -1.32
SCN9A-205ENST00000454569 C9JAW5 83 aa6.79□□□□□ -1.32
SCN9A-205ENST00000454569 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
SCN9A-205ENST00000454569 UBE2BP63146 152 aa6.79□□□□□ -1.32
SCN9A-205ENST00000454569 SS18L2Q9UHA2 77 aa6.79□□□□□ -1.32
SCN9A-205ENST00000454569 BIRC6Q9NR09 4857 aa6.79□□□□□ -1.32
SCN9A-205ENST00000454569 KRTAP4-16G5E9R7 235 aaPredicted RBP6.78□□□□□ -1.32
SCN9A-205ENST00000454569 DIRC1Q969H9 104 aa6.78□□□□□ -1.32
SCN9A-205ENST00000454569 FAM218AQ96MZ4 157 aa6.78□□□□□ -1.32
SCN9A-205ENST00000454569 ZNF73O43830 326 aaPredicted RBP6.78□□□□□ -1.32
SCN9A-205ENST00000454569 TRACP01848 142 aa6.78□□□□□ -1.32
SCN9A-205ENST00000454569 PRO0461Q9UI25 63 aa6.78□□□□□ -1.32
SCN9A-205ENST00000454569 PSORS1C2Q9UIG4 136 aa6.78□□□□□ -1.32
SCN9A-205ENST00000454569 SLC25A20O43772 301 aa6.77□□□□□ -1.33
SCN9A-205ENST00000454569 DNAL4O96015 105 aa6.77□□□□□ -1.33
SCN9A-205ENST00000454569 SPRR1AP35321 89 aa6.77□□□□□ -1.33
SCN9A-205ENST00000454569 REG3GQ6UW15 175 aa6.76□□□□□ -1.33
SCN9A-205ENST00000454569 SMIM20Q8N5G0 67 aa6.76□□□□□ -1.33
SCN9A-205ENST00000454569 J3QR89 54 aa6.75□□□□□ -1.33
SCN9A-205ENST00000454569 PRYO14603 147 aa6.75□□□□□ -1.33
SCN9A-205ENST00000454569 TRBV7-6A0A0J9YX20 115 aa6.74□□□□□ -1.33
SCN9A-205ENST00000454569 A0A1B0GX51 115 aa6.74□□□□□ -1.33
SCN9A-205ENST00000454569 SNCGO76070 127 aa6.74□□□□□ -1.33
SCN9A-205ENST00000454569 COX7BP24311 80 aa6.74□□□□□ -1.33
SCN9A-205ENST00000454569 H3BT86 120 aa6.74□□□□□ -1.33
SCN9A-205ENST00000454569 PRLHP81277 87 aa6.74□□□□□ -1.33
SCN9A-205ENST00000454569 ANKRD29Q8N6D5 301 aa6.74□□□□□ -1.33
SCN9A-205ENST00000454569 ELOF1P60002 83 aaKnown RBP6.73□□□□□ -1.33
SCN9A-205ENST00000454569 C1orf137Q5JT78 98 aa6.73□□□□□ -1.33
SCN9A-205ENST00000454569 ETDBQ3ZM63 59 aa6.72□□□□□ -1.33
SCN9A-205ENST00000454569 LINC00575Q6W349 94 aa6.72□□□□□ -1.33
SCN9A-205ENST00000454569 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
SCN9A-205ENST00000454569 KRTAP13-1Q8IUC0 172 aa6.72□□□□□ -1.33
SCN9A-205ENST00000454569 Q9BRP9 147 aa6.72□□□□□ -1.33
SCN9A-205ENST00000454569 BCE1O60756 84 aa6.71□□□□□ -1.34
SCN9A-205ENST00000454569 CDK2AP2O75956 126 aa6.71□□□□□ -1.34
SCN9A-205ENST00000454569 ERC2-IT1O76042 136 aa6.71□□□□□ -1.34
SCN9A-205ENST00000454569 KRTAP10-4P60372 401 aaPredicted RBP6.71□□□□□ -1.34
SCN9A-205ENST00000454569 ETDCA0A1B0GVM5 59 aa6.7□□□□□ -1.34
SCN9A-205ENST00000454569 hADV29S1A0JD25 119 aa6.7□□□□□ -1.34
SCN9A-205ENST00000454569 TEN1Q86WV5 123 aa6.7□□□□□ -1.34
SCN9A-205ENST00000454569 SMCR5Q8TEV8 140 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms