RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 PLECQ15149 4684 aaKnown RBP3.97□□□□□ -1.77
MSH6-205ENST00000454137 DNAH1Q9P2D7 4330 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 C14orf177Q52M58 125 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 C10orf25Q5T742 122 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 C9orf153Q5TBE3 101 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 UNQ6190/PRO20217Q6UXQ8 127 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 LINC00846Q9NV44 126 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 TGP01266 2768 aa3.96□□□□□ -1.78
MSH6-205ENST00000454137 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 IGLV6-57P01721 117 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 TLX1NBP0CAT3 122 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 COX7CP15954 63 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 PRR3P79522 188 aaKnown RBP3.95□□□□□ -1.78
MSH6-205ENST00000454137 RPL18AQ02543 176 aaKnown RBP3.95□□□□□ -1.78
MSH6-205ENST00000454137 HIGD2BQ4VC39 106 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 C9orf116Q5BN46 136 aaPredicted RBP3.95□□□□□ -1.78
MSH6-205ENST00000454137 LINC00575Q6W349 94 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 KRTAP1-5Q9BYS1 174 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 C6orf48Q9UBA6 75 aa3.95□□□□□ -1.78
MSH6-205ENST00000454137 LOC110117498A0A087WWA1 95 aa3.94□□□□□ -1.78
MSH6-205ENST00000454137 IGKV3D-7A0A0C4DH55 119 aa3.94□□□□□ -1.78
MSH6-205ENST00000454137 CNBPP62633 177 aaKnown RBP3.94□□□□□ -1.78
MSH6-205ENST00000454137 CASC10Q5T4H9 136 aa3.94□□□□□ -1.78
MSH6-205ENST00000454137 Q6ZR54 194 aa3.94□□□□□ -1.78
MSH6-205ENST00000454137 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
MSH6-205ENST00000454137 CAMK2N2Q96S95 79 aa3.94□□□□□ -1.78
MSH6-205ENST00000454137 PKIGQ9Y2B9 76 aa3.94□□□□□ -1.78
MSH6-205ENST00000454137 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 TRBV10-3A0A0K0K1G6 114 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 hADV29S1A0JD25 119 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 NDUFC2-KCTD14E9PQ53 114 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 CRYGAP11844 174 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 PDE6GP18545 87 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 SYCNQ0VAF6 134 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 Q6ZRN7 208 aaPredicted RBP3.93□□□□□ -1.78
MSH6-205ENST00000454137 Q6ZRU5 148 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 Q8NDZ9 215 aa3.93□□□□□ -1.78
MSH6-205ENST00000454137 TRAV23DV6A0A075B6W5 121 aa3.92□□□□□ -1.78
MSH6-205ENST00000454137 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
MSH6-205ENST00000454137 RBM3P98179 157 aaKnown RBP3.92□□□□□ -1.78
MSH6-205ENST00000454137 SERP2Q8N6R1 65 aa3.92□□□□□ -1.78
MSH6-205ENST00000454137 DIRC1Q969H9 104 aa3.92□□□□□ -1.78
MSH6-205ENST00000454137 LYSTQ99698 3801 aa3.92□□□□□ -1.78
MSH6-205ENST00000454137 UBL5Q9BZL1 73 aa3.92□□□□□ -1.78
MSH6-205ENST00000454137 LRCOL1A6NCL2 159 aa3.91□□□□□ -1.78
MSH6-205ENST00000454137 PSCAO43653 123 aa3.91□□□□□ -1.78
MSH6-205ENST00000454137 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.91□□□□□ -1.78
MSH6-205ENST00000454137 Q6ZQT0 140 aa3.91□□□□□ -1.78
MSH6-205ENST00000454137 SMIM20Q8N5G0 67 aa3.91□□□□□ -1.78
MSH6-205ENST00000454137 DNAH6Q9C0G6 4158 aa3.9□□□□□ -1.78
MSH6-205ENST00000454137 A0A0A0MQY5 61 aa3.9□□□□□ -1.79
MSH6-205ENST00000454137 ZNF73O43830 326 aaPredicted RBP3.9□□□□□ -1.79
MSH6-205ENST00000454137 BCE1O60756 84 aa3.9□□□□□ -1.79
MSH6-205ENST00000454137 COX7BP24311 80 aa3.9□□□□□ -1.79
MSH6-205ENST00000454137 DSCR8Q96T75 97 aa3.9□□□□□ -1.79
MSH6-205ENST00000454137 KRTAP4-12Q9BQ66 201 aa3.9□□□□□ -1.79
MSH6-205ENST00000454137 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
MSH6-205ENST00000454137 LAMTOR3Q9UHA4 124 aa3.9□□□□□ -1.79
MSH6-205ENST00000454137 IGLV5-37A0A075B6J1 123 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 A0A087WVE0 104 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 LOC107984640A0A0U1RRK4 108 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 M0R378 163 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 VPREB1P12018 145 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
MSH6-205ENST00000454137 TMEM258P61165 79 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 Q6ZQY7 126 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 Q8N1X5 172 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 XAGE1AQ9HD64 81 aa3.89□□□□□ -1.79
MSH6-205ENST00000454137 J3KT08 172 aa3.88□□□□□ -1.79
MSH6-205ENST00000454137 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
MSH6-205ENST00000454137 Q6ZRP5 223 aa3.88□□□□□ -1.79
MSH6-205ENST00000454137 C9orf163Q8N9P6 203 aa3.88□□□□□ -1.79
MSH6-205ENST00000454137 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
MSH6-205ENST00000454137 C16orf90A8MZG2 172 aa3.87□□□□□ -1.79
MSH6-205ENST00000454137 CXCL6P80162 114 aa3.87□□□□□ -1.79
MSH6-205ENST00000454137 FAM19A1Q7Z5A9 133 aa3.87□□□□□ -1.79
MSH6-205ENST00000454137 LINC00474Q9P2X8 69 aa3.87□□□□□ -1.79
MSH6-205ENST00000454137 ALMS1Q8TCU4 4167 aa3.87□□□□□ -1.79
MSH6-205ENST00000454137 A0A087WTM6 91 aa3.86□□□□□ -1.79
MSH6-205ENST00000454137 EPM2AB3EWF7 344 aa3.86□□□□□ -1.79
MSH6-205ENST00000454137 LY6G6CO95867 125 aa3.86□□□□□ -1.79
MSH6-205ENST00000454137 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
MSH6-205ENST00000454137 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
MSH6-205ENST00000454137 Q6ZVQ6 151 aa3.86□□□□□ -1.79
MSH6-205ENST00000454137 DNAH10Q8IVF4 4471 aa3.85□□□□□ -1.79
MSH6-205ENST00000454137 TRAV7A0A075B6U4 112 aa3.85□□□□□ -1.79
MSH6-205ENST00000454137 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
MSH6-205ENST00000454137 KMT2AQ03164 3969 aa3.85□□□□□ -1.79
MSH6-205ENST00000454137 M0R2N4 97 aa3.84□□□□□ -1.79
MSH6-205ENST00000454137 KRTAP10-2P60368 255 aa3.84□□□□□ -1.79
MSH6-205ENST00000454137 DNAH17Q9UFH2 4485 aa3.83□□□□□ -1.8
MSH6-205ENST00000454137 LCE6AA0A183 80 aa3.83□□□□□ -1.8
MSH6-205ENST00000454137 HAMPP81172 84 aa3.83□□□□□ -1.8
MSH6-205ENST00000454137 NKAPP1Q8N9T2 125 aa3.83□□□□□ -1.8
MSH6-205ENST00000454137 CYSTM1Q9H1C7 97 aa3.83□□□□□ -1.8
MSH6-205ENST00000454137 KCNQ1DNQ9H478 68 aa3.83□□□□□ -1.8
MSH6-205ENST00000454137 DNAH2Q9P225 4427 aa3.82□□□□□ -1.8
MSH6-205ENST00000454137 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms