RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 IGLV1-50A0A075B6I6 118 aa5.37□□□□□ -1.55
COL28A1-205ENST00000453441 PYY3Q5JQD4 70 aa5.37□□□□□ -1.55
COL28A1-205ENST00000453441 SPINK6Q6UWN8 80 aa5.37□□□□□ -1.55
COL28A1-205ENST00000453441 PAM16Q9Y3D7 125 aa5.37□□□□□ -1.55
COL28A1-205ENST00000453441 PKHD1L1Q86WI1 4243 aa5.36□□□□□ -1.55
COL28A1-205ENST00000453441 GAGE10A6NGK3 116 aa5.36□□□□□ -1.55
COL28A1-205ENST00000453441 PRYO14603 147 aa5.36□□□□□ -1.55
COL28A1-205ENST00000453441 BCE1O60756 84 aa5.36□□□□□ -1.55
COL28A1-205ENST00000453441 IGLV7-43P04211 117 aa5.36□□□□□ -1.55
COL28A1-205ENST00000453441 SLC25A34Q6PIV7 304 aa5.36□□□□□ -1.55
COL28A1-205ENST00000453441 RPL37AP8A6NKH3 93 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 NCR3O14931 201 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 RPL28P46779 137 aaKnown RBP5.35□□□□□ -1.55
COL28A1-205ENST00000453441 SRSF9Q13242 221 aaKnown RBP eCLIP5.35□□□□□ -1.55
COL28A1-205ENST00000453441 S100A7L2Q5SY68 101 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 REG3GQ6UW15 175 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 SOSTDC1Q6X4U4 206 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 Q8NDZ9 215 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 DIRC1Q969H9 104 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 KCNQ1DNQ9H478 68 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 HIGD1BQ9P298 99 aa5.35□□□□□ -1.55
COL28A1-205ENST00000453441 PCLOQ9Y6V0 5065 aa5.34□□□□□ -1.55
COL28A1-205ENST00000453441 IGKV2-28A0A075B6P5 120 aa5.34□□□□□ -1.55
COL28A1-205ENST00000453441 IGKV2D-28P01615 120 aa5.34□□□□□ -1.55
COL28A1-205ENST00000453441 DDTP30046 118 aa5.34□□□□□ -1.55
COL28A1-205ENST00000453441 NPC2P61916 151 aa5.34□□□□□ -1.55
COL28A1-205ENST00000453441 KRTAP11-1Q8IUC1 163 aa5.34□□□□□ -1.55
COL28A1-205ENST00000453441 TMEM126AQ9H061 195 aa5.34□□□□□ -1.55
COL28A1-205ENST00000453441 FLG2Q5D862 2391 aaPredicted RBP5.33□□□□□ -1.56
COL28A1-205ENST00000453441 TRBV10-3A0A0K0K1G6 114 aa5.33□□□□□ -1.56
COL28A1-205ENST00000453441 H0Y9J4 135 aa5.33□□□□□ -1.56
COL28A1-205ENST00000453441 ZNF861PO60384 105 aa5.33□□□□□ -1.56
COL28A1-205ENST00000453441 IGLV6-57P01721 117 aa5.33□□□□□ -1.56
COL28A1-205ENST00000453441 SMIM6P0DI80 62 aa5.33□□□□□ -1.56
COL28A1-205ENST00000453441 LINC00337Q8N6G1 96 aa5.33□□□□□ -1.56
COL28A1-205ENST00000453441 C14orf144Q96I85 54 aa5.33□□□□□ -1.56
COL28A1-205ENST00000453441 OXTP01178 125 aa5.32□□□□□ -1.56
COL28A1-205ENST00000453441 SPRR1AP35321 89 aa5.32□□□□□ -1.56
COL28A1-205ENST00000453441 UBE2AP49459 152 aa5.32□□□□□ -1.56
COL28A1-205ENST00000453441 HNRNPA3P51991 378 aaKnown RBP5.32□□□□□ -1.56
COL28A1-205ENST00000453441 TAL2Q16559 108 aa5.32□□□□□ -1.56
COL28A1-205ENST00000453441 MUSTN1Q8IVN3 82 aa5.32□□□□□ -1.56
COL28A1-205ENST00000453441 HIST1H4GQ99525 98 aa5.32□□□□□ -1.56
COL28A1-205ENST00000453441 TRAV23DV6A0A075B6W5 121 aa5.31□□□□□ -1.56
COL28A1-205ENST00000453441 TRAV13-2A0A0B4J235 113 aa5.31□□□□□ -1.56
COL28A1-205ENST00000453441 HINT1P49773 126 aaPredicted RBP5.31□□□□□ -1.56
COL28A1-205ENST00000453441 UQCR10Q9UDW1 63 aa5.31□□□□□ -1.56
COL28A1-205ENST00000453441 ETDCA0A1B0GVM5 59 aa5.3□□□□□ -1.56
COL28A1-205ENST00000453441 FAM19A1Q7Z5A9 133 aa5.3□□□□□ -1.56
COL28A1-205ENST00000453441 KRTAP13-1Q8IUC0 172 aa5.3□□□□□ -1.56
COL28A1-205ENST00000453441 OR13C6PQ8NH95 151 aa5.3□□□□□ -1.56
COL28A1-205ENST00000453441 KRTAP29-1A8MX34 341 aaPredicted RBP5.29□□□□□ -1.56
COL28A1-205ENST00000453441 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
COL28A1-205ENST00000453441 TRBV7-6A0A0J9YX20 115 aa5.28□□□□□ -1.56
COL28A1-205ENST00000453441 A4D1N5 150 aa5.28□□□□□ -1.56
COL28A1-205ENST00000453441 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
COL28A1-205ENST00000453441 ZNF73O43830 326 aaPredicted RBP5.28□□□□□ -1.56
COL28A1-205ENST00000453441 C2orf91Q6ZV80 131 aa5.28□□□□□ -1.56
COL28A1-205ENST00000453441 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
COL28A1-205ENST00000453441 A6NDN8 102 aa5.27□□□□□ -1.57
COL28A1-205ENST00000453441 TRIAP1O43715 76 aa5.27□□□□□ -1.57
COL28A1-205ENST00000453441 HSD52Q0P140 79 aa5.27□□□□□ -1.57
COL28A1-205ENST00000453441 SVIPQ8NHG7 77 aa5.27□□□□□ -1.57
COL28A1-205ENST00000453441 ZNF706Q9Y5V0 76 aaPredicted RBP5.27□□□□□ -1.57
COL28A1-205ENST00000453441 DMBT1Q9UGM3 2413 aaPredicted RBP5.26□□□□□ -1.57
COL28A1-205ENST00000453441 LOC105371267A0A1B0GV96 52 aa5.26□□□□□ -1.57
COL28A1-205ENST00000453441 PRLHP81277 87 aa5.26□□□□□ -1.57
COL28A1-205ENST00000453441 Q6ZRX8 168 aa5.26□□□□□ -1.57
COL28A1-205ENST00000453441 CEND1Q8N111 149 aa5.26□□□□□ -1.57
COL28A1-205ENST00000453441 LINC01600Q96MT4 127 aa5.26□□□□□ -1.57
COL28A1-205ENST00000453441 A0A0B4J2C4 111 aa5.25□□□□□ -1.57
COL28A1-205ENST00000453441 RPL13AP40429 203 aaKnown RBP5.25□□□□□ -1.57
COL28A1-205ENST00000453441 HIGD2AQ9BW72 106 aa5.25□□□□□ -1.57
COL28A1-205ENST00000453441 A0A1B0GWB2 263 aa5.24□□□□□ -1.57
COL28A1-205ENST00000453441 VAMP3Q15836 100 aa5.24□□□□□ -1.57
COL28A1-205ENST00000453441 FAM229BQ4G0N7 80 aa5.24□□□□□ -1.57
COL28A1-205ENST00000453441 C6orf99Q4VX62 202 aa5.24□□□□□ -1.57
COL28A1-205ENST00000453441 RAB37Q96AX2 223 aa5.24□□□□□ -1.57
COL28A1-205ENST00000453441 DHRS4-AS1Q9P1J3 65 aa5.24□□□□□ -1.57
COL28A1-205ENST00000453441 LRP1Q07954 4544 aaKnown RBP5.24□□□□□ -1.57
COL28A1-205ENST00000453441 TSTD3H0UI37 97 aa5.23□□□□□ -1.57
COL28A1-205ENST00000453441 COX7BP24311 80 aa5.23□□□□□ -1.57
COL28A1-205ENST00000453441 ELOF1P60002 83 aaKnown RBP5.23□□□□□ -1.57
COL28A1-205ENST00000453441 NHP2Q9NX24 153 aaKnown RBP5.23□□□□□ -1.57
COL28A1-205ENST00000453441 KRTAP1-4P0C5Y4 121 aa5.22□□□□□ -1.57
COL28A1-205ENST00000453441 SMIM11BQ8TCY0 68 aa5.22□□□□□ -1.57
COL28A1-205ENST00000453441 SMCR5Q8TEV8 140 aa5.22□□□□□ -1.57
COL28A1-205ENST00000453441 C12orf57Q99622 126 aa5.22□□□□□ -1.57
COL28A1-205ENST00000453441 M0R143 59 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 CFC1BP0CG36 223 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 CFC1P0CG37 223 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 CRYGAP11844 174 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 BVES-AS1Q5T3Y7 98 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 SPRR4Q96PI1 79 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 Q9BRP9 147 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
COL28A1-205ENST00000453441 SLC25A20O43772 301 aa5.2□□□□□ -1.58
COL28A1-205ENST00000453441 FXYD2P54710 66 aa5.2□□□□□ -1.58
COL28A1-205ENST00000453441 PRO1933Q9H354 126 aa5.2□□□□□ -1.58
COL28A1-205ENST00000453441 TNXBP22105 4242 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms