RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SPRR1AP35321 89 aa7.23□□□□□ -1.25
CPSF4-208ENST00000452047 KRTAP4-16G5E9R7 235 aaPredicted RBP7.22□□□□□ -1.25
CPSF4-208ENST00000452047 LEPROTO15243 131 aa7.22□□□□□ -1.25
CPSF4-208ENST00000452047 UBE2V1Q13404 147 aa7.22□□□□□ -1.25
CPSF4-208ENST00000452047 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
CPSF4-208ENST00000452047 SPRR4Q96PI1 79 aa7.22□□□□□ -1.25
CPSF4-208ENST00000452047 KCNQ1DNQ9H478 68 aa7.22□□□□□ -1.25
CPSF4-208ENST00000452047 LOC107984156A0A0G2JMH3 177 aa7.21□□□□□ -1.26
CPSF4-208ENST00000452047 HSD52Q0P140 79 aa7.21□□□□□ -1.26
CPSF4-208ENST00000452047 C2orf91Q6ZV80 131 aa7.21□□□□□ -1.26
CPSF4-208ENST00000452047 ARL17AQ8IVW1 177 aa7.21□□□□□ -1.26
CPSF4-208ENST00000452047 LINC00337Q8N6G1 96 aa7.21□□□□□ -1.26
CPSF4-208ENST00000452047 RETNLBQ9BQ08 111 aa7.21□□□□□ -1.26
CPSF4-208ENST00000452047 TRBV10-3A0A0K0K1G6 114 aa7.2□□□□□ -1.26
CPSF4-208ENST00000452047 A6NDN8 102 aa7.2□□□□□ -1.26
CPSF4-208ENST00000452047 J3QQQ9 107 aa7.2□□□□□ -1.26
CPSF4-208ENST00000452047 DPM2O94777 84 aa7.2□□□□□ -1.26
CPSF4-208ENST00000452047 ANKRD39Q53RE8 183 aa7.2□□□□□ -1.26
CPSF4-208ENST00000452047 DAND5Q8N907 189 aa7.2□□□□□ -1.26
CPSF4-208ENST00000452047 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
CPSF4-208ENST00000452047 TAX1BP3O14907 124 aa7.19□□□□□ -1.26
CPSF4-208ENST00000452047 IGKCP01834 107 aa7.18□□□□□ -1.26
CPSF4-208ENST00000452047 ZNF706Q9Y5V0 76 aaPredicted RBP7.18□□□□□ -1.26
CPSF4-208ENST00000452047 ETDCA0A1B0GVM5 59 aa7.17□□□□□ -1.26
CPSF4-208ENST00000452047 NMUP48645 174 aa7.17□□□□□ -1.26
CPSF4-208ENST00000452047 HERVK_113P61574 105 aa7.17□□□□□ -1.26
CPSF4-208ENST00000452047 SMCR5Q8TEV8 140 aa7.17□□□□□ -1.26
CPSF4-208ENST00000452047 TRBV10-2A0A0K0K1G8 114 aa7.16□□□□□ -1.26
CPSF4-208ENST00000452047 VAMP3Q15836 100 aa7.16□□□□□ -1.26
CPSF4-208ENST00000452047 B5MCH6 92 aa7.15□□□□□ -1.26
CPSF4-208ENST00000452047 LGALS3P17931 250 aaKnown RBP7.15□□□□□ -1.26
CPSF4-208ENST00000452047 TAL2Q16559 108 aa7.15□□□□□ -1.26
CPSF4-208ENST00000452047 TPRXLQ17RH7 258 aa7.15□□□□□ -1.26
CPSF4-208ENST00000452047 SPANXB1Q9NS25 103 aaPredicted RBP7.15□□□□□ -1.26
CPSF4-208ENST00000452047 LINC00483Q53H64 154 aa7.14□□□□□ -1.27
CPSF4-208ENST00000452047 SPAG11AQ6PDA7 123 aa7.14□□□□□ -1.27
CPSF4-208ENST00000452047 CBY1Q9Y3M2 126 aa7.14□□□□□ -1.27
CPSF4-208ENST00000452047 IGLV7-46A0A075B6I9 117 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 C9orf118A6NHY6 69 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 E9PLD3 99 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 EIF4EBP3O60516 100 aaPredicted RBP7.13□□□□□ -1.27
CPSF4-208ENST00000452047 NDUFC2O95298 119 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 SOSTDC1Q6X4U4 206 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 GTF2H5Q6ZYL4 71 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 Q9BRP9 147 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 PPDPFQ9H3Y8 114 aa7.13□□□□□ -1.27
CPSF4-208ENST00000452047 A0A0J9YXY3 114 aa7.12□□□□□ -1.27
CPSF4-208ENST00000452047 ERC2-IT1O76042 136 aa7.12□□□□□ -1.27
CPSF4-208ENST00000452047 IGLV6-57P01721 117 aa7.12□□□□□ -1.27
CPSF4-208ENST00000452047 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
CPSF4-208ENST00000452047 Q6ZRX8 168 aa7.12□□□□□ -1.27
CPSF4-208ENST00000452047 PCP2Q8IVA1 136 aa7.12□□□□□ -1.27
CPSF4-208ENST00000452047 Q8NBF4 154 aa7.12□□□□□ -1.27
CPSF4-208ENST00000452047 Q6ZVH6 145 aa7.1□□□□□ -1.27
CPSF4-208ENST00000452047 MUC17Q685J3 4493 aa7.09□□□□□ -1.27
CPSF4-208ENST00000452047 K7EP34 96 aa7.09□□□□□ -1.27
CPSF4-208ENST00000452047 NPC2P61916 151 aa7.09□□□□□ -1.27
CPSF4-208ENST00000452047 S100A7L2Q5SY68 101 aa7.09□□□□□ -1.27
CPSF4-208ENST00000452047 GAGE2AQ6NT46 116 aa7.09□□□□□ -1.27
CPSF4-208ENST00000452047 LITAFQ99732 161 aa7.09□□□□□ -1.27
CPSF4-208ENST00000452047 CDIP1Q9H305 208 aa7.09□□□□□ -1.27
CPSF4-208ENST00000452047 TRAV23DV6A0A075B6W5 121 aa7.08□□□□□ -1.28
CPSF4-208ENST00000452047 C4orf48Q5BLP8 95 aa7.08□□□□□ -1.28
CPSF4-208ENST00000452047 FP248Q71RG6 208 aaPredicted RBP7.08□□□□□ -1.28
CPSF4-208ENST00000452047 CEND1Q8N111 149 aa7.08□□□□□ -1.28
CPSF4-208ENST00000452047 SPINK1P00995 79 aa7.07□□□□□ -1.28
CPSF4-208ENST00000452047 MOBPQ13875 183 aa7.07□□□□□ -1.28
CPSF4-208ENST00000452047 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
CPSF4-208ENST00000452047 A0A0U1RQV1 116 aa7.06□□□□□ -1.28
CPSF4-208ENST00000452047 A0A1W2PPM0 123 aa7.06□□□□□ -1.28
CPSF4-208ENST00000452047 ZNF73O43830 326 aaPredicted RBP7.06□□□□□ -1.28
CPSF4-208ENST00000452047 IGLV9-49A0A0B4J1Y8 123 aa7.05□□□□□ -1.28
CPSF4-208ENST00000452047 A0A1B0GWB2 263 aa7.05□□□□□ -1.28
CPSF4-208ENST00000452047 H3BUT2 72 aa7.05□□□□□ -1.28
CPSF4-208ENST00000452047 TIMM17BO60830 172 aa7.05□□□□□ -1.28
CPSF4-208ENST00000452047 FABP2P12104 132 aa7.05□□□□□ -1.28
CPSF4-208ENST00000452047 LINC00308Q8TCZ7 52 aa7.05□□□□□ -1.28
CPSF4-208ENST00000452047 SPANXCQ9NY87 97 aa7.05□□□□□ -1.28
CPSF4-208ENST00000452047 K7ERU9 68 aa7.04□□□□□ -1.28
CPSF4-208ENST00000452047 FXYD2P54710 66 aa7.04□□□□□ -1.28
CPSF4-208ENST00000452047 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
CPSF4-208ENST00000452047 KRTAP13-3Q3SY46 172 aa7.04□□□□□ -1.28
CPSF4-208ENST00000452047 OCIAD2Q56VL3 154 aa7.04□□□□□ -1.28
CPSF4-208ENST00000452047 SSBP3-AS1Q7Z2R9 100 aa7.04□□□□□ -1.28
CPSF4-208ENST00000452047 SPCS1Q9Y6A9 102 aa7.04□□□□□ -1.28
CPSF4-208ENST00000452047 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
CPSF4-208ENST00000452047 A6NJY4 79 aa7.03□□□□□ -1.28
CPSF4-208ENST00000452047 ZNF815PA8K554 130 aa7.03□□□□□ -1.28
CPSF4-208ENST00000452047 TTTY13Q9BZ97 58 aa7.03□□□□□ -1.28
CPSF4-208ENST00000452047 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
CPSF4-208ENST00000452047 Q8N377 158 aa7.02□□□□□ -1.29
CPSF4-208ENST00000452047 ST20-AS1Q8NBB2 130 aa7.02□□□□□ -1.29
CPSF4-208ENST00000452047 HIST1H4GQ99525 98 aa7.02□□□□□ -1.29
CPSF4-208ENST00000452047 LCE2AQ5TA79 106 aaPredicted RBP7.01□□□□□ -1.29
CPSF4-208ENST00000452047 RAB37Q96AX2 223 aa7□□□□□ -1.29
CPSF4-208ENST00000452047 SPANXDQ9BXN6 97 aa7□□□□□ -1.29
CPSF4-208ENST00000452047 NHP2Q9NX24 153 aaKnown RBP7□□□□□ -1.29
CPSF4-208ENST00000452047 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
CPSF4-208ENST00000452047 F8W1H4 67 aa6.98□□□□□ -1.29
CPSF4-208ENST00000452047 SPRR1BP22528 89 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms