RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 HIST1H2BKO60814 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BJP06899 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 FABP4P15090 132 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BOP23527 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 G0S2P27469 103 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BBP33778 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BDP58876 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BCP62807 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST2H2BEQ16778 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 C1orf137Q5JT78 98 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.65□□□□□ -1.83
LINC00458-203ENST00000451744 TMEM170BQ5T4T1 132 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 CEND1Q8N111 149 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BHQ93079 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 CHCHD1Q96BP2 118 aaKnown RBP3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BNQ99877 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 HIST1H2BMQ99879 126 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 LINC00474Q9P2X8 69 aa3.65□□□□□ -1.83
LINC00458-203ENST00000451744 TMEM223A0PJW6 202 aa3.64□□□□□ -1.83
LINC00458-203ENST00000451744 PFN2P35080 140 aa3.64□□□□□ -1.83
LINC00458-203ENST00000451744 SEC11AP67812 179 aa3.64□□□□□ -1.83
LINC00458-203ENST00000451744 RNF213Q63HN8 5207 aa3.64□□□□□ -1.83
LINC00458-203ENST00000451744 TRAV12-1A0A0B4J245 112 aa3.63□□□□□ -1.83
LINC00458-203ENST00000451744 H3BRM9 83 aa3.63□□□□□ -1.83
LINC00458-203ENST00000451744 IGLV7-43P04211 117 aa3.63□□□□□ -1.83
LINC00458-203ENST00000451744 UBE2BP63146 152 aa3.63□□□□□ -1.83
LINC00458-203ENST00000451744 ERG28Q9UKR5 140 aa3.63□□□□□ -1.83
LINC00458-203ENST00000451744 PKIGQ9Y2B9 76 aa3.63□□□□□ -1.83
LINC00458-203ENST00000451744 C22orf24Q9Y442 160 aa3.63□□□□□ -1.83
LINC00458-203ENST00000451744 LINC01549A6NIU2 74 aa3.62□□□□□ -1.83
LINC00458-203ENST00000451744 LEPROTL1O95214 131 aa3.62□□□□□ -1.83
LINC00458-203ENST00000451744 OXTP01178 125 aa3.62□□□□□ -1.83
LINC00458-203ENST00000451744 CXCL5P42830 114 aa3.62□□□□□ -1.83
LINC00458-203ENST00000451744 KRTAP13-3Q3SY46 172 aa3.62□□□□□ -1.83
LINC00458-203ENST00000451744 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
LINC00458-203ENST00000451744 MAP1LC3CQ9BXW4 147 aa3.62□□□□□ -1.83
LINC00458-203ENST00000451744 SND1-IT1Q9HBX3 110 aa3.62□□□□□ -1.83
LINC00458-203ENST00000451744 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
LINC00458-203ENST00000451744 SMIM13P0DJ93 91 aa3.61□□□□□ -1.83
LINC00458-203ENST00000451744 DAND5Q8N907 189 aa3.61□□□□□ -1.83
LINC00458-203ENST00000451744 LINC00167Q96N53 147 aa3.61□□□□□ -1.83
LINC00458-203ENST00000451744 IGKV2-28A0A075B6P5 120 aa3.6□□□□□ -1.83
LINC00458-203ENST00000451744 TMEM238C9JI98 176 aa3.6□□□□□ -1.83
LINC00458-203ENST00000451744 IGKV2D-28P01615 120 aa3.6□□□□□ -1.83
LINC00458-203ENST00000451744 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
LINC00458-203ENST00000451744 LINC01600Q96MT4 127 aa3.6□□□□□ -1.83
LINC00458-203ENST00000451744 TTTY13Q9BZ97 58 aa3.6□□□□□ -1.83
LINC00458-203ENST00000451744 H0Y9J4 135 aa3.59□□□□□ -1.83
LINC00458-203ENST00000451744 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
LINC00458-203ENST00000451744 KRTAP10-8P60410 259 aa3.59□□□□□ -1.83
LINC00458-203ENST00000451744 ANAPC11Q9NYG5 84 aa3.59□□□□□ -1.83
LINC00458-203ENST00000451744 V9GYY9 64 aa3.59□□□□□ -1.83
LINC00458-203ENST00000451744 IGKV2D-26A0A0A0MRZ7 120 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 SYS1-DBNDD2H3BUS1 97 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 NCR3O14931 201 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 DPM2O94777 84 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 IGKCP01834 107 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 LINC00158P58513 81 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 PRLHP81277 87 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 MEIG1Q5JSS6 88 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 MIR7-3HGQ8N6C7 128 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 NDUFA12Q9UI09 145 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 HSPB8Q9UJY1 196 aa3.58□□□□□ -1.84
LINC00458-203ENST00000451744 LEPROTO15243 131 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 BCE1O60756 84 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 C3orf79P0CE67 100 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 HERVK_113P61574 105 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 NPC2P61916 151 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 SOSTDC1Q6X4U4 206 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 ATOH7Q8N100 152 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 TP73-AS1Q9UF72 201 aa3.57□□□□□ -1.84
LINC00458-203ENST00000451744 J3QQQ9 107 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 M0R378 163 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 ZNF861PO60384 105 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 PLNP26678 52 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 KRTDAPP60985 99 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 LINC01545Q5VT33 79 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 BOD1L2Q8IYS8 172 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 PLEKHB2Q96CS7 222 aa3.56□□□□□ -1.84
LINC00458-203ENST00000451744 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
LINC00458-203ENST00000451744 IGLV1-50A0A075B6I6 118 aa3.55□□□□□ -1.84
LINC00458-203ENST00000451744 DIRC1Q969H9 104 aa3.55□□□□□ -1.84
LINC00458-203ENST00000451744 TMEM126AQ9H061 195 aa3.55□□□□□ -1.84
LINC00458-203ENST00000451744 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
LINC00458-203ENST00000451744 MYMXA0A1B0GTQ4 84 aa3.54□□□□□ -1.84
LINC00458-203ENST00000451744 LGALS3P17931 250 aaKnown RBP3.54□□□□□ -1.84
LINC00458-203ENST00000451744 S100A1P23297 94 aa3.54□□□□□ -1.84
LINC00458-203ENST00000451744 NMUP48645 174 aa3.54□□□□□ -1.84
LINC00458-203ENST00000451744 COX17Q14061 63 aa3.54□□□□□ -1.84
LINC00458-203ENST00000451744 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
LINC00458-203ENST00000451744 HIST3H2BBQ8N257 126 aa3.54□□□□□ -1.84
LINC00458-203ENST00000451744 UBE2AP49459 152 aa3.53□□□□□ -1.84
LINC00458-203ENST00000451744 TAL2Q16559 108 aa3.53□□□□□ -1.84
LINC00458-203ENST00000451744 FAM19A1Q7Z5A9 133 aa3.53□□□□□ -1.84
LINC00458-203ENST00000451744 HIST1H2BLQ99880 126 aa3.53□□□□□ -1.84
LINC00458-203ENST00000451744 RPL28P46779 137 aaKnown RBP3.52□□□□□ -1.85
LINC00458-203ENST00000451744 PCP2Q8IVA1 136 aa3.52□□□□□ -1.85
LINC00458-203ENST00000451744 C3orf22Q8N5N4 141 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms