RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 XAGE1AQ9HD64 81 aa8.08□□□□□ -1.12
COL27A1-202ENST00000451716 C6orf48Q9UBA6 75 aa8.07□□□□□ -1.12
COL27A1-202ENST00000451716 TRAV7A0A075B6U4 112 aa8.06□□□□□ -1.12
COL27A1-202ENST00000451716 H3BNG1 76 aa8.05□□□□□ -1.12
COL27A1-202ENST00000451716 ATP5EP56381 51 aaPredicted RBP8.05□□□□□ -1.12
COL27A1-202ENST00000451716 C6orf99Q4VX62 202 aa8.05□□□□□ -1.12
COL27A1-202ENST00000451716 KTN1-AS1Q86SY8 53 aa8.05□□□□□ -1.12
COL27A1-202ENST00000451716 KRTAP26-1Q6PEX3 210 aa8.04□□□□□ -1.12
COL27A1-202ENST00000451716 CAMK2N2Q96S95 79 aa8.03□□□□□ -1.12
COL27A1-202ENST00000451716 IGKV2D-24A0A075B6R9 120 aa8.02□□□□□ -1.13
COL27A1-202ENST00000451716 HUWE1Q7Z6Z7 4374 aaKnown RBP8.02□□□□□ -1.13
COL27A1-202ENST00000451716 C8orf87E5RJ46 101 aa8.01□□□□□ -1.13
COL27A1-202ENST00000451716 Q8N814 137 aa8.01□□□□□ -1.13
COL27A1-202ENST00000451716 C15orf56Q8N910 161 aa8.01□□□□□ -1.13
COL27A1-202ENST00000451716 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
COL27A1-202ENST00000451716 NDUFC1O43677 76 aa8.01□□□□□ -1.13
COL27A1-202ENST00000451716 GVQW2A0A096LPI5 108 aaPredicted RBP8□□□□□ -1.13
COL27A1-202ENST00000451716 M0R378 163 aa8□□□□□ -1.13
COL27A1-202ENST00000451716 TENM2Q9NT68 2774 aa7.99□□□□□ -1.13
COL27A1-202ENST00000451716 TRBV10-3A0A0K0K1G6 114 aa7.99□□□□□ -1.13
COL27A1-202ENST00000451716 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
COL27A1-202ENST00000451716 LINC01556Q5JQF7 62 aa7.98□□□□□ -1.13
COL27A1-202ENST00000451716 STAB2Q8WWQ8 2551 aa7.98□□□□□ -1.13
COL27A1-202ENST00000451716 LYSTQ99698 3801 aa7.98□□□□□ -1.13
COL27A1-202ENST00000451716 K7EIL1 84 aa7.97□□□□□ -1.13
COL27A1-202ENST00000451716 IGLV6-57P01721 117 aa7.97□□□□□ -1.13
COL27A1-202ENST00000451716 ATP5EP2Q5VTU8 51 aa7.97□□□□□ -1.13
COL27A1-202ENST00000451716 OBSCN-AS1Q96MR7 158 aa7.97□□□□□ -1.13
COL27A1-202ENST00000451716 TMEM256-PLSCR3K7ERE1 68 aa7.96□□□□□ -1.13
COL27A1-202ENST00000451716 PSPHP1O15172 72 aa7.96□□□□□ -1.13
COL27A1-202ENST00000451716 PRR26Q8N8Z3 221 aa7.96□□□□□ -1.13
COL27A1-202ENST00000451716 A8MU10 97 aa7.96□□□□□ -1.14
COL27A1-202ENST00000451716 LINC00575Q6W349 94 aa7.96□□□□□ -1.14
COL27A1-202ENST00000451716 LINC00167Q96N53 147 aa7.96□□□□□ -1.14
COL27A1-202ENST00000451716 COL7A1Q02388 2944 aa7.96□□□□□ -1.14
COL27A1-202ENST00000451716 LINC00588Q9Y4M8 146 aa7.96□□□□□ -1.14
COL27A1-202ENST00000451716 TRAV10A0A0B4J240 114 aa7.95□□□□□ -1.14
COL27A1-202ENST00000451716 LRCOL1A6NCL2 159 aa7.95□□□□□ -1.14
COL27A1-202ENST00000451716 MUC7Q8TAX7 377 aa7.95□□□□□ -1.14
COL27A1-202ENST00000451716 Q6ZRP5 223 aa7.94□□□□□ -1.14
COL27A1-202ENST00000451716 BCE1O60756 84 aa7.94□□□□□ -1.14
COL27A1-202ENST00000451716 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
COL27A1-202ENST00000451716 VPREB1P12018 145 aa7.93□□□□□ -1.14
COL27A1-202ENST00000451716 DNAH10OSP0CZ25 163 aa7.93□□□□□ -1.14
COL27A1-202ENST00000451716 ZNF73O43830 326 aaPredicted RBP7.92□□□□□ -1.14
COL27A1-202ENST00000451716 Q6ZQY7 126 aa7.92□□□□□ -1.14
COL27A1-202ENST00000451716 SYCNQ0VAF6 134 aa7.91□□□□□ -1.14
COL27A1-202ENST00000451716 DIRC1Q969H9 104 aa7.91□□□□□ -1.14
COL27A1-202ENST00000451716 Q1T7F1 81 aa7.9□□□□□ -1.14
COL27A1-202ENST00000451716 Q6ZVQ6 151 aa7.9□□□□□ -1.15
COL27A1-202ENST00000451716 DNAH1Q9P2D7 4330 aa7.9□□□□□ -1.15
COL27A1-202ENST00000451716 TRBV7-4A0A0J9YYF1 115 aa7.89□□□□□ -1.15
COL27A1-202ENST00000451716 FUSP35637 526 aaKnown RBP eCLIP7.89□□□□□ -1.15
COL27A1-202ENST00000451716 DNAH10Q8IVF4 4471 aa7.89□□□□□ -1.15
COL27A1-202ENST00000451716 JMJD7-PLA2G4BH0Y9G9 81 aa7.89□□□□□ -1.15
COL27A1-202ENST00000451716 UBL5Q9BZL1 73 aa7.88□□□□□ -1.15
COL27A1-202ENST00000451716 NDUFS5O43920 106 aa7.87□□□□□ -1.15
COL27A1-202ENST00000451716 COX7BP24311 80 aa7.87□□□□□ -1.15
COL27A1-202ENST00000451716 UBE2BP63146 152 aa7.87□□□□□ -1.15
COL27A1-202ENST00000451716 SERTAD4-AS1Q5TG53 156 aa7.87□□□□□ -1.15
COL27A1-202ENST00000451716 SPTSSBQ8NFR3 76 aa7.87□□□□□ -1.15
COL27A1-202ENST00000451716 TMEM254Q8TBM7 123 aa7.87□□□□□ -1.15
COL27A1-202ENST00000451716 TRAV22A0A0B4J277 110 aa7.85□□□□□ -1.15
COL27A1-202ENST00000451716 M0R2N4 97 aa7.85□□□□□ -1.15
COL27A1-202ENST00000451716 ELOF1P60002 83 aaKnown RBP7.85□□□□□ -1.15
COL27A1-202ENST00000451716 FAM168BA1KXE4 195 aa7.85□□□□□ -1.15
COL27A1-202ENST00000451716 DNAH9Q9NYC9 4486 aa7.85□□□□□ -1.15
COL27A1-202ENST00000451716 MDFIQ99750 246 aa7.84□□□□□ -1.15
COL27A1-202ENST00000451716 NKAPP1Q8N9T2 125 aa7.83□□□□□ -1.16
COL27A1-202ENST00000451716 hDV103S1A0JD37 113 aa7.83□□□□□ -1.16
COL27A1-202ENST00000451716 RPL37AP8A6NKH3 93 aa7.83□□□□□ -1.16
COL27A1-202ENST00000451716 A8MUN3 132 aa7.83□□□□□ -1.16
COL27A1-202ENST00000451716 C7orf33Q8WU49 177 aa7.82□□□□□ -1.16
COL27A1-202ENST00000451716 PRYO14603 147 aa7.82□□□□□ -1.16
COL27A1-202ENST00000451716 Q6ZQT0 140 aa7.82□□□□□ -1.16
COL27A1-202ENST00000451716 TGP01266 2768 aa7.82□□□□□ -1.16
COL27A1-202ENST00000451716 PHF5AQ7RTV0 110 aaKnown RBP7.81□□□□□ -1.16
COL27A1-202ENST00000451716 DNAH7Q8WXX0 4024 aa7.81□□□□□ -1.16
COL27A1-202ENST00000451716 NREPQ16612 68 aa7.81□□□□□ -1.16
COL27A1-202ENST00000451716 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
COL27A1-202ENST00000451716 KRTAP1-5Q9BYS1 174 aa7.81□□□□□ -1.16
COL27A1-202ENST00000451716 HAMPP81172 84 aa7.81□□□□□ -1.16
COL27A1-202ENST00000451716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.8□□□□□ -1.16
COL27A1-202ENST00000451716 C16orf90A8MZG2 172 aa7.8□□□□□ -1.16
COL27A1-202ENST00000451716 LINC01547P58512 204 aaPredicted RBP7.79□□□□□ -1.16
COL27A1-202ENST00000451716 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
COL27A1-202ENST00000451716 DNHD1Q96M86 4753 aa7.78□□□□□ -1.16
COL27A1-202ENST00000451716 LCA10Q71F78 164 aa7.78□□□□□ -1.16
COL27A1-202ENST00000451716 DEFB105AQ8NG35 78 aa7.78□□□□□ -1.16
COL27A1-202ENST00000451716 KCNQ1DNQ9H478 68 aa7.77□□□□□ -1.16
COL27A1-202ENST00000451716 LOC110117498A0A087WWA1 95 aa7.77□□□□□ -1.17
COL27A1-202ENST00000451716 TLX1NBP0CAT3 122 aa7.77□□□□□ -1.17
COL27A1-202ENST00000451716 A6NN06 94 aa7.77□□□□□ -1.17
COL27A1-202ENST00000451716 C1orf64Q8NEQ6 169 aa7.77□□□□□ -1.17
COL27A1-202ENST00000451716 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
COL27A1-202ENST00000451716 PLECQ15149 4684 aaKnown RBP7.76□□□□□ -1.17
COL27A1-202ENST00000451716 UBE2DNLQ8IWF7 75 aa7.75□□□□□ -1.17
COL27A1-202ENST00000451716 UBE2AP49459 152 aa7.74□□□□□ -1.17
COL27A1-202ENST00000451716 HCG22E2RYF7 251 aa7.74□□□□□ -1.17
COL27A1-202ENST00000451716 CHKB-CPT1BH3BT56 60 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms