RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 A0A0J9YXY3 114 aa9.25□□□□□ -0.93
SGCE-208ENST00000450385 TIMM17BO60830 172 aa9.25□□□□□ -0.93
SGCE-208ENST00000450385 TPRXLQ17RH7 258 aa9.25□□□□□ -0.93
SGCE-208ENST00000450385 LINC01545Q5VT33 79 aa9.25□□□□□ -0.93
SGCE-208ENST00000450385 C3orf22Q8N5N4 141 aa9.25□□□□□ -0.93
SGCE-208ENST00000450385 Q6ZRX8 168 aa9.24□□□□□ -0.93
SGCE-208ENST00000450385 SPINK1P00995 79 aa9.23□□□□□ -0.93
SGCE-208ENST00000450385 HINT1P49773 126 aaPredicted RBP9.23□□□□□ -0.93
SGCE-208ENST00000450385 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
SGCE-208ENST00000450385 SSBP3-AS1Q7Z2R9 100 aa9.23□□□□□ -0.93
SGCE-208ENST00000450385 A0A0U1RQV1 116 aa9.22□□□□□ -0.93
SGCE-208ENST00000450385 AKR1D1P51857 326 aa9.22□□□□□ -0.93
SGCE-208ENST00000450385 COA6Q5JTJ3 125 aaKnown RBP9.22□□□□□ -0.93
SGCE-208ENST00000450385 RPS29P62273 56 aaKnown RBP9.21□□□□□ -0.94
SGCE-208ENST00000450385 IGLV7-46A0A075B6I9 117 aa9.2□□□□□ -0.94
SGCE-208ENST00000450385 TRAV23DV6A0A075B6W5 121 aa9.2□□□□□ -0.94
SGCE-208ENST00000450385 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
SGCE-208ENST00000450385 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
SGCE-208ENST00000450385 MUC2Q02817 5179 aa9.19□□□□□ -0.94
SGCE-208ENST00000450385 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
SGCE-208ENST00000450385 LINC00518Q8N0U6 118 aa9.19□□□□□ -0.94
SGCE-208ENST00000450385 GAGE2AQ6NT46 116 aa9.18□□□□□ -0.94
SGCE-208ENST00000450385 SOSTDC1Q6X4U4 206 aa9.18□□□□□ -0.94
SGCE-208ENST00000450385 Q8NBF4 154 aa9.18□□□□□ -0.94
SGCE-208ENST00000450385 COPS9Q8WXC6 57 aa9.18□□□□□ -0.94
SGCE-208ENST00000450385 Q9BRP9 147 aa9.18□□□□□ -0.94
SGCE-208ENST00000450385 CDIP1Q9H305 208 aa9.18□□□□□ -0.94
SGCE-208ENST00000450385 LINC00308Q8TCZ7 52 aa9.17□□□□□ -0.94
SGCE-208ENST00000450385 LITAFQ99732 161 aa9.17□□□□□ -0.94
SGCE-208ENST00000450385 RETNLBQ9BQ08 111 aa9.17□□□□□ -0.94
SGCE-208ENST00000450385 PPDPFQ9H3Y8 114 aa9.16□□□□□ -0.94
SGCE-208ENST00000450385 C20orf202A1L168 122 aa9.15□□□□□ -0.94
SGCE-208ENST00000450385 ZNF815PA8K554 130 aa9.15□□□□□ -0.94
SGCE-208ENST00000450385 ERC2-IT1O76042 136 aa9.15□□□□□ -0.94
SGCE-208ENST00000450385 C3orf79P0CE67 100 aa9.15□□□□□ -0.94
SGCE-208ENST00000450385 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
SGCE-208ENST00000450385 Q6ZVH6 145 aa9.14□□□□□ -0.95
SGCE-208ENST00000450385 DHRS4-AS1Q9P1J3 65 aa9.14□□□□□ -0.95
SGCE-208ENST00000450385 NPC2P61916 151 aa9.13□□□□□ -0.95
SGCE-208ENST00000450385 SLC25A34Q6PIV7 304 aa9.13□□□□□ -0.95
SGCE-208ENST00000450385 C21orf62-AS1Q17RA5 79 aa9.12□□□□□ -0.95
SGCE-208ENST00000450385 IFITM1P13164 125 aa9.11□□□□□ -0.95
SGCE-208ENST00000450385 KRTDAPP60985 99 aa9.11□□□□□ -0.95
SGCE-208ENST00000450385 SNRPEP62304 92 aaKnown RBP9.11□□□□□ -0.95
SGCE-208ENST00000450385 MOBPQ13875 183 aa9.11□□□□□ -0.95
SGCE-208ENST00000450385 OR13C6PQ8NH95 151 aa9.11□□□□□ -0.95
SGCE-208ENST00000450385 IGLV9-49A0A0B4J1Y8 123 aa9.1□□□□□ -0.95
SGCE-208ENST00000450385 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
SGCE-208ENST00000450385 SLC25A20O43772 301 aa9.09□□□□□ -0.95
SGCE-208ENST00000450385 SPRR1BP22528 89 aa9.08□□□□□ -0.96
SGCE-208ENST00000450385 SCGB1D4Q6XE38 83 aa9.08□□□□□ -0.96
SGCE-208ENST00000450385 ELOF1P60002 83 aaKnown RBP9.06□□□□□ -0.96
SGCE-208ENST00000450385 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
SGCE-208ENST00000450385 Q8N377 158 aa9.06□□□□□ -0.96
SGCE-208ENST00000450385 COX7BP24311 80 aa9.04□□□□□ -0.96
SGCE-208ENST00000450385 KRTAP13-3Q3SY46 172 aa9.04□□□□□ -0.96
SGCE-208ENST00000450385 ANKRD39Q53RE8 183 aa9.04□□□□□ -0.96
SGCE-208ENST00000450385 C9orf153Q5TBE3 101 aa9.04□□□□□ -0.96
SGCE-208ENST00000450385 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
SGCE-208ENST00000450385 MUC17Q685J3 4493 aa9.03□□□□□ -0.96
SGCE-208ENST00000450385 A4D1N5 150 aa9.03□□□□□ -0.96
SGCE-208ENST00000450385 TTTY13Q9BZ97 58 aa9.03□□□□□ -0.96
SGCE-208ENST00000450385 A0A1B0GWB2 263 aa9.02□□□□□ -0.97
SGCE-208ENST00000450385 C6orf99Q4VX62 202 aa9.02□□□□□ -0.97
SGCE-208ENST00000450385 ST20-AS1Q8NBB2 130 aa9.02□□□□□ -0.97
SGCE-208ENST00000450385 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
SGCE-208ENST00000450385 LIMD2Q9BT23 127 aa9□□□□□ -0.97
SGCE-208ENST00000450385 TEX49A0A1B0GTD5 131 aa8.99□□□□□ -0.97
SGCE-208ENST00000450385 CD164Q04900 197 aa8.99□□□□□ -0.97
SGCE-208ENST00000450385 ASB16-AS1Q495Z4 193 aa8.99□□□□□ -0.97
SGCE-208ENST00000450385 S100A1P23297 94 aa8.98□□□□□ -0.97
SGCE-208ENST00000450385 TAL2Q16559 108 aa8.98□□□□□ -0.97
SGCE-208ENST00000450385 NHP2Q9NX24 153 aaKnown RBP8.98□□□□□ -0.97
SGCE-208ENST00000450385 A6NDN8 102 aa8.97□□□□□ -0.97
SGCE-208ENST00000450385 S100A2P29034 98 aa8.97□□□□□ -0.97
SGCE-208ENST00000450385 SEC61BP60468 96 aaKnown RBP8.97□□□□□ -0.97
SGCE-208ENST00000450385 MUSTN1Q8IVN3 82 aa8.97□□□□□ -0.97
SGCE-208ENST00000450385 HSBP1L1C9JCN9 74 aa8.96□□□□□ -0.98
SGCE-208ENST00000450385 PCP2Q8IVA1 136 aa8.96□□□□□ -0.98
SGCE-208ENST00000450385 ATOH7Q8N100 152 aa8.96□□□□□ -0.98
SGCE-208ENST00000450385 PRO1933Q9H354 126 aa8.95□□□□□ -0.98
SGCE-208ENST00000450385 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
SGCE-208ENST00000450385 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
SGCE-208ENST00000450385 VAMP3Q15836 100 aa8.93□□□□□ -0.98
SGCE-208ENST00000450385 HIST1H2BLQ99880 126 aa8.93□□□□□ -0.98
SGCE-208ENST00000450385 S100A6P06703 90 aa8.92□□□□□ -0.98
SGCE-208ENST00000450385 LCE2AQ5TA79 106 aaPredicted RBP8.92□□□□□ -0.98
SGCE-208ENST00000450385 Q5XG85 94 aa8.92□□□□□ -0.98
SGCE-208ENST00000450385 FAT4Q6V0I7 4981 aa8.9□□□□□ -0.98
SGCE-208ENST00000450385 XP32Q5T750 250 aa8.9□□□□□ -0.98
SGCE-208ENST00000450385 DEFB105AQ8NG35 78 aa8.9□□□□□ -0.98
SGCE-208ENST00000450385 H7C2G1 150 aa8.89□□□□□ -0.99
SGCE-208ENST00000450385 SMIM11BQ8TCY0 68 aa8.89□□□□□ -0.99
SGCE-208ENST00000450385 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
SGCE-208ENST00000450385 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
SGCE-208ENST00000450385 Q1RN00 199 aa8.87□□□□□ -0.99
SGCE-208ENST00000450385 HRCT1Q6UXD1 115 aa8.84□□□□□ -0.99
SGCE-208ENST00000450385 LINC00575Q6W349 94 aa8.83□□□□□ -1
SGCE-208ENST00000450385 DLEU1O43261 78 aa8.81□□□□□ -1
SGCE-208ENST00000450385 hADV29S1A0JD25 119 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms