RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 CRIPTQ9P021 101 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 ABCA7Q8IZY2 2146 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 CUBNO60494 3623 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 UNC13CQ8NB66 2214 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 IGLV5-37A0A075B6J1 123 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 C9orf129Q5T035 196 aaKnown RBP1.47□□□□□ -2.17
USP53-202ENST00000450251 ZCCHC13Q8WW36 166 aaKnown RBP1.47□□□□□ -2.17
USP53-202ENST00000450251 CACNA1DQ01668 2161 aa1.47□□□□□ -2.17
USP53-202ENST00000450251 SEC61BP60468 96 aaKnown RBP1.46□□□□□ -2.17
USP53-202ENST00000450251 C8orf17Q9NRJ1 99 aa1.46□□□□□ -2.17
USP53-202ENST00000450251 TLX1NBP0CAT3 122 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 CSPG4Q6UVK1 2322 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 A0A1B0GVX0 72 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 ODF3L2Q3SX64 289 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 SSBP3-AS1Q7Z2R9 100 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 ST20-AS1Q8NBB2 130 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 TEP1Q99973 2627 aaKnown RBP1.46□□□□□ -2.18
USP53-202ENST00000450251 C15orf56Q8N910 161 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 KRTAP9-9Q9BYP9 154 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 KRTAP9-4Q9BYQ2 154 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 PRR14LQ5THK1 2151 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 MED13Q9UHV7 2174 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 COL6A5A8TX70 2615 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 KRTAP16-1A8MUX0 517 aa1.46□□□□□ -2.18
USP53-202ENST00000450251 PI4KAP42356 2102 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 ZNF575Q86XF7 245 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 DIDO1Q9BTC0 2240 aaKnown RBP1.45□□□□□ -2.18
USP53-202ENST00000450251 ALPK2Q86TB3 2170 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 INTS1Q8N201 2190 aaKnown RBP1.45□□□□□ -2.18
USP53-202ENST00000450251 MGAM2Q2M2H8 2515 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 IGLV1-50A0A075B6I6 118 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 NUPR2A6NF83 97 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 CSAG1Q6PB30 78 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 IGFL1Q6UW32 110 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 DOCK7Q96N67 2140 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 USF3Q68DE3 2245 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 DEFB135Q30KP9 77 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 DEFB116Q30KQ4 102 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 LINC01556Q5JQF7 62 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 Q8N377 158 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 IGLV9-49A0A0B4J1Y8 123 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 DSCR10P59022 87 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 SPATA8Q6RVD6 105 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 CAMK2N1Q7Z7J9 78 aa1.45□□□□□ -2.18
USP53-202ENST00000450251 IGLV1-51P01701 117 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 MED12Q93074 2177 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 HIVEP1P15822 2718 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 ARHGAP32A7KAX9 2087 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 IGLV8-61A0A075B6I0 122 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 A0A1W2PNM2 257 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 PRAC1Q96KF2 57 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 CENPEQ02224 2701 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 KRTAP9-2Q9BYQ4 174 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 ITPR3Q14573 2671 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 SONP18583 2426 aaKnown RBP1.44□□□□□ -2.18
USP53-202ENST00000450251 RP1P56715 2156 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 IGKV2-24A0A0C4DH68 120 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 CNBPP62633 177 aaKnown RBP1.44□□□□□ -2.18
USP53-202ENST00000450251 PRLHP81277 87 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 C9orf163Q8N9P6 203 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 DSCAML1Q8TD84 2053 aa1.44□□□□□ -2.18
USP53-202ENST00000450251 CSMD2Q7Z408 3487 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 ARFGEF3Q5TH69 2177 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 RANBP2P49792 3224 aaKnown RBP1.43□□□□□ -2.18
USP53-202ENST00000450251 SPINK7P58062 85 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 LUZP6Q538Z0 58 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 KRTAP4-5Q9BYR2 181 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 PRR34Q9NV39 138 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 HRES1P13985 223 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 LINC00612Q8N6U2 182 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 DSPP15924 2871 aaKnown RBP1.43□□□□□ -2.18
USP53-202ENST00000450251 DEFB113Q30KQ7 82 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 KRTAP25-1Q3LHN0 102 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 C19orf73Q9NVV2 129 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 SEC16AO15027 2179 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 CHD7Q9P2D1 2997 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 A0A096LNT2 108 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 M0R2N4 97 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 SPINK6Q6UWN8 80 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 Q6ZR54 194 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 KRTAP5-2Q701N4 177 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 LY6G6CO95867 125 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 KRTAP19-1Q8IUB9 90 aa1.43□□□□□ -2.18
USP53-202ENST00000450251 ZGRF1Q86YA3 2104 aa1.42□□□□□ -2.18
USP53-202ENST00000450251 A0A096LNI7 61 aa1.42□□□□□ -2.18
USP53-202ENST00000450251 MMP24-AS1A0A0U1RRL7 71 aa1.42□□□□□ -2.18
USP53-202ENST00000450251 SPINK1P00995 79 aa1.42□□□□□ -2.18
USP53-202ENST00000450251 IGLV7-43P04211 117 aa1.42□□□□□ -2.18
USP53-202ENST00000450251 SDK2Q58EX2 2172 aa1.42□□□□□ -2.18
USP53-202ENST00000450251 MALRD1Q5VYJ5 2156 aa1.42□□□□□ -2.18
USP53-202ENST00000450251 INAFM1C9JVW0 142 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 ROMO1P60602 79 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 DOPEY2Q9Y3R5 2298 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 NBEAL1Q6ZS30 2694 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 IGKV2D-30A0A075B6S6 120 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 IGKV2-30P06310 120 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 EYSQ5T1H1 3165 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 NF1P21359 2839 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 NOTCH1P46531 2555 aa1.41□□□□□ -2.18
USP53-202ENST00000450251 TLN2Q9Y4G6 2542 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms