RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MXRA5Q9NR99 2828 aa5.71□□□□□ -1.49
LSM5-208ENST00000450169 NAV2Q8IVL1 2488 aa5.71□□□□□ -1.49
LSM5-208ENST00000450169 CR1P17927 2039 aa5.71□□□□□ -1.49
LSM5-208ENST00000450169 PHF5AQ7RTV0 110 aaKnown RBP5.71□□□□□ -1.5
LSM5-208ENST00000450169 CYSRT1A8MQ03 144 aa5.71□□□□□ -1.5
LSM5-208ENST00000450169 GIG44P09565 113 aaPredicted RBP5.71□□□□□ -1.5
LSM5-208ENST00000450169 ST20-AS1Q8NBB2 130 aa5.71□□□□□ -1.5
LSM5-208ENST00000450169 APOC4P55056 127 aa5.7□□□□□ -1.5
LSM5-208ENST00000450169 REG3AQ06141 175 aa5.7□□□□□ -1.5
LSM5-208ENST00000450169 B9D2Q9BPU9 175 aa5.7□□□□□ -1.5
LSM5-208ENST00000450169 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
LSM5-208ENST00000450169 XAGE1AQ9HD64 81 aa5.7□□□□□ -1.5
LSM5-208ENST00000450169 CUBNO60494 3623 aa5.7□□□□□ -1.5
LSM5-208ENST00000450169 AKAP9Q99996 3911 aa5.69□□□□□ -1.5
LSM5-208ENST00000450169 A6NN06 94 aa5.69□□□□□ -1.5
LSM5-208ENST00000450169 ANGP03950 147 aaKnown RBP5.69□□□□□ -1.5
LSM5-208ENST00000450169 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
LSM5-208ENST00000450169 C4orf3Q8WVX3 66 aa5.69□□□□□ -1.5
LSM5-208ENST00000450169 LCA10Q71F78 164 aa5.69□□□□□ -1.5
LSM5-208ENST00000450169 TLN2Q9Y4G6 2542 aa5.69□□□□□ -1.5
LSM5-208ENST00000450169 TEX15Q9BXT5 2789 aa5.69□□□□□ -1.5
LSM5-208ENST00000450169 A0A096LPF7 62 aa5.68□□□□□ -1.5
LSM5-208ENST00000450169 VPREB1P12018 145 aa5.68□□□□□ -1.5
LSM5-208ENST00000450169 C11orf45Q8TAV5 145 aa5.68□□□□□ -1.5
LSM5-208ENST00000450169 A0A1B0GW54 56 aa5.68□□□□□ -1.5
LSM5-208ENST00000450169 DEFB130BP0DP73 79 aa5.68□□□□□ -1.5
LSM5-208ENST00000450169 DEFB130AP0DP74 79 aa5.68□□□□□ -1.5
LSM5-208ENST00000450169 KPRPQ5T749 579 aaPredicted RBP5.68□□□□□ -1.5
LSM5-208ENST00000450169 CSNK1G2-AS1Q8NCQ2 148 aa5.68□□□□□ -1.5
LSM5-208ENST00000450169 HELZ2Q9BYK8 2649 aaKnown RBP5.67□□□□□ -1.5
LSM5-208ENST00000450169 B4DSR2 109 aa5.67□□□□□ -1.5
LSM5-208ENST00000450169 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
LSM5-208ENST00000450169 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
LSM5-208ENST00000450169 A6NED7 52 aa5.67□□□□□ -1.5
LSM5-208ENST00000450169 K7EQZ3 153 aa5.67□□□□□ -1.5
LSM5-208ENST00000450169 Q75L30 129 aa5.67□□□□□ -1.5
LSM5-208ENST00000450169 LINC00208Q96KT6 92 aa5.67□□□□□ -1.5
LSM5-208ENST00000450169 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
LSM5-208ENST00000450169 CCDC168Q8NDH2 2452 aa5.66□□□□□ -1.5
LSM5-208ENST00000450169 DSCR10P59022 87 aa5.66□□□□□ -1.5
LSM5-208ENST00000450169 C7orf65Q6ZTY9 151 aa5.66□□□□□ -1.5
LSM5-208ENST00000450169 KRTAP10-9P60411 292 aa5.65□□□□□ -1.5
LSM5-208ENST00000450169 ITPR3Q14573 2671 aa5.65□□□□□ -1.5
LSM5-208ENST00000450169 MP68P56378 58 aa5.65□□□□□ -1.51
LSM5-208ENST00000450169 MAPK1IP1LQ8NDC0 245 aa5.65□□□□□ -1.51
LSM5-208ENST00000450169 DEFB105AQ8NG35 78 aa5.65□□□□□ -1.51
LSM5-208ENST00000450169 C6orf48Q9UBA6 75 aa5.65□□□□□ -1.51
LSM5-208ENST00000450169 A0A1W2PNM2 257 aa5.64□□□□□ -1.51
LSM5-208ENST00000450169 Q9BRP9 147 aa5.64□□□□□ -1.51
LSM5-208ENST00000450169 WFDC10AQ9H1F0 79 aa5.64□□□□□ -1.51
LSM5-208ENST00000450169 ITPR2Q14571 2701 aa5.64□□□□□ -1.51
LSM5-208ENST00000450169 Q8N377 158 aa5.64□□□□□ -1.51
LSM5-208ENST00000450169 SPANXA2-OT1Q8N9U9 137 aa5.64□□□□□ -1.51
LSM5-208ENST00000450169 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
LSM5-208ENST00000450169 MYO9AB2RTY4 2548 aa5.63□□□□□ -1.51
LSM5-208ENST00000450169 SONP18583 2426 aaKnown RBP5.63□□□□□ -1.51
LSM5-208ENST00000450169 CDC42SE1Q9NRR8 79 aa5.63□□□□□ -1.51
LSM5-208ENST00000450169 PRO0255Q9UI72 69 aa5.63□□□□□ -1.51
LSM5-208ENST00000450169 FLNAP21333 2647 aaKnown RBP5.63□□□□□ -1.51
LSM5-208ENST00000450169 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
LSM5-208ENST00000450169 DSCR9P59020 149 aa5.63□□□□□ -1.51
LSM5-208ENST00000450169 Q6YL49 198 aa5.62□□□□□ -1.51
LSM5-208ENST00000450169 C8orf87E5RJ46 101 aa5.62□□□□□ -1.51
LSM5-208ENST00000450169 Q8NBF4 154 aa5.62□□□□□ -1.51
LSM5-208ENST00000450169 NF1P21359 2839 aa5.61□□□□□ -1.51
LSM5-208ENST00000450169 ANK3Q12955 4377 aaKnown RBP5.61□□□□□ -1.51
LSM5-208ENST00000450169 C1orf137Q5JT78 98 aa5.61□□□□□ -1.51
LSM5-208ENST00000450169 CMC4P56277 68 aaPredicted RBP5.6□□□□□ -1.51
LSM5-208ENST00000450169 PDZD2O15018 2839 aa5.6□□□□□ -1.51
LSM5-208ENST00000450169 GCN1Q92616 2671 aaKnown RBP5.6□□□□□ -1.51
LSM5-208ENST00000450169 SPRR4Q96PI1 79 aa5.6□□□□□ -1.51
LSM5-208ENST00000450169 ACANP16112 2415 aa5.6□□□□□ -1.51
LSM5-208ENST00000450169 UNC79Q9P2D8 2635 aa5.59□□□□□ -1.51
LSM5-208ENST00000450169 MOBPQ13875 183 aa5.59□□□□□ -1.51
LSM5-208ENST00000450169 DEFB116Q30KQ4 102 aa5.58□□□□□ -1.52
LSM5-208ENST00000450169 WFDC13Q8IUB5 93 aa5.58□□□□□ -1.52
LSM5-208ENST00000450169 JMJD1CQ15652 2540 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 DEFB113Q30KQ7 82 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 KRTAP1-3Q8IUG1 177 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 MTORP42345 2549 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 H0Y9P7 68 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 H3BPC8 53 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 EGFEM1PQ0D2K5 195 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 COA5Q86WW8 74 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 PRR34Q9NV39 138 aa5.57□□□□□ -1.52
LSM5-208ENST00000450169 HECTD1Q9ULT8 2610 aa5.56□□□□□ -1.52
LSM5-208ENST00000450169 SETXQ7Z333 2677 aaKnown RBP5.56□□□□□ -1.52
LSM5-208ENST00000450169 SETD2Q9BYW2 2564 aaPredicted RBP5.56□□□□□ -1.52
LSM5-208ENST00000450169 WFDC10BQ8IUB3 73 aa5.56□□□□□ -1.52
LSM5-208ENST00000450169 IGKV2D-24A0A075B6R9 120 aa5.55□□□□□ -1.52
LSM5-208ENST00000450169 NKAPP1Q8N9T2 125 aa5.55□□□□□ -1.52
LSM5-208ENST00000450169 FASNP49327 2511 aaKnown RBP5.55□□□□□ -1.52
LSM5-208ENST00000450169 FSHBP01225 129 aa5.55□□□□□ -1.52
LSM5-208ENST00000450169 DHRS4-AS1Q9P1J3 65 aa5.55□□□□□ -1.52
LSM5-208ENST00000450169 DNAJC9-AS1A6NH13 148 aa5.54□□□□□ -1.52
LSM5-208ENST00000450169 C9orf163Q8N9P6 203 aa5.54□□□□□ -1.52
LSM5-208ENST00000450169 C7orf33Q8WU49 177 aa5.54□□□□□ -1.52
LSM5-208ENST00000450169 Q6ZRX8 168 aa5.53□□□□□ -1.52
LSM5-208ENST00000450169 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms