RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 OR13C6PQ8NH95 151 aa12.51□□□□□ -0.41
CPSF7-208ENST00000450000 MUC2Q02817 5179 aa12.51□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BKO60814 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BJP06899 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BOP23527 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BBP33778 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BDP58876 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BCP62807 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST2H2BEQ16778 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.49□□□□□ -0.41
CPSF7-208ENST00000450000 C9orf153Q5TBE3 101 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 SOSTDC1Q6X4U4 206 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BHQ93079 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BNQ99877 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 HIST1H2BMQ99879 126 aa12.49□□□□□ -0.41
CPSF7-208ENST00000450000 PET117Q6UWS5 81 aa12.48□□□□□ -0.41
CPSF7-208ENST00000450000 SPANXCQ9NY87 97 aa12.47□□□□□ -0.41
CPSF7-208ENST00000450000 ZNF815PA8K554 130 aa12.46□□□□□ -0.41
CPSF7-208ENST00000450000 LINC01545Q5VT33 79 aa12.45□□□□□ -0.42
CPSF7-208ENST00000450000 LINC00308Q8TCZ7 52 aa12.45□□□□□ -0.42
CPSF7-208ENST00000450000 EIF4EBP3O60516 100 aaPredicted RBP12.44□□□□□ -0.42
CPSF7-208ENST00000450000 TIMM17BO60830 172 aa12.44□□□□□ -0.42
CPSF7-208ENST00000450000 RPS29P62273 56 aaKnown RBP12.43□□□□□ -0.42
CPSF7-208ENST00000450000 SLC25A20O43772 301 aa12.42□□□□□ -0.42
CPSF7-208ENST00000450000 C5orf52A6NGY3 159 aa12.41□□□□□ -0.42
CPSF7-208ENST00000450000 SLC25A34Q6PIV7 304 aa12.41□□□□□ -0.42
CPSF7-208ENST00000450000 KRTDAPP60985 99 aa12.4□□□□□ -0.42
CPSF7-208ENST00000450000 LINC00518Q8N0U6 118 aa12.4□□□□□ -0.42
CPSF7-208ENST00000450000 ST20-AS1Q8NBB2 130 aa12.4□□□□□ -0.42
CPSF7-208ENST00000450000 SPANXDQ9BXN6 97 aa12.4□□□□□ -0.42
CPSF7-208ENST00000450000 C20orf202A1L168 122 aa12.39□□□□□ -0.43
CPSF7-208ENST00000450000 SCGB1D4Q6XE38 83 aa12.39□□□□□ -0.43
CPSF7-208ENST00000450000 LITAFQ99732 161 aa12.39□□□□□ -0.43
CPSF7-208ENST00000450000 DHRS4-AS1Q9P1J3 65 aa12.39□□□□□ -0.43
CPSF7-208ENST00000450000 C3orf79P0CE67 100 aa12.38□□□□□ -0.43
CPSF7-208ENST00000450000 KRTAP13-3Q3SY46 172 aa12.38□□□□□ -0.43
CPSF7-208ENST00000450000 Q8N377 158 aa12.37□□□□□ -0.43
CPSF7-208ENST00000450000 COPS9Q8WXC6 57 aa12.37□□□□□ -0.43
CPSF7-208ENST00000450000 COX7BP24311 80 aa12.34□□□□□ -0.43
CPSF7-208ENST00000450000 TTTY13Q9BZ97 58 aa12.34□□□□□ -0.43
CPSF7-208ENST00000450000 LAMTOR3Q9UHA4 124 aa12.34□□□□□ -0.43
CPSF7-208ENST00000450000 MUC17Q685J3 4493 aa12.34□□□□□ -0.43
CPSF7-208ENST00000450000 SEC61BP60468 96 aaKnown RBP12.32□□□□□ -0.44
CPSF7-208ENST00000450000 TAL2Q16559 108 aa12.31□□□□□ -0.44
CPSF7-208ENST00000450000 C6orf99Q4VX62 202 aa12.31□□□□□ -0.44
CPSF7-208ENST00000450000 AKR1D1P51857 326 aa12.29□□□□□ -0.44
CPSF7-208ENST00000450000 COA6Q5JTJ3 125 aaKnown RBP12.29□□□□□ -0.44
CPSF7-208ENST00000450000 LIMD2Q9BT23 127 aa12.29□□□□□ -0.44
CPSF7-208ENST00000450000 ELOF1P60002 83 aaKnown RBP12.28□□□□□ -0.44
CPSF7-208ENST00000450000 ASB16-AS1Q495Z4 193 aa12.28□□□□□ -0.44
CPSF7-208ENST00000450000 HRCT1Q6UXD1 115 aa12.28□□□□□ -0.44
CPSF7-208ENST00000450000 DEFB105AQ8NG35 78 aa12.28□□□□□ -0.44
CPSF7-208ENST00000450000 A6NDN8 102 aa12.27□□□□□ -0.45
CPSF7-208ENST00000450000 IFITM1P13164 125 aa12.27□□□□□ -0.45
CPSF7-208ENST00000450000 SPRR1BP22528 89 aa12.27□□□□□ -0.45
CPSF7-208ENST00000450000 Q6ZVH6 145 aa12.25□□□□□ -0.45
CPSF7-208ENST00000450000 ATOH7Q8N100 152 aa12.25□□□□□ -0.45
CPSF7-208ENST00000450000 ANKRD39Q53RE8 183 aa12.23□□□□□ -0.45
CPSF7-208ENST00000450000 TRBV7-6A0A0J9YX20 115 aa12.22□□□□□ -0.45
CPSF7-208ENST00000450000 TEX49A0A1B0GTD5 131 aa12.22□□□□□ -0.45
CPSF7-208ENST00000450000 A0A1B0GWB2 263 aa12.22□□□□□ -0.45
CPSF7-208ENST00000450000 Q1RN00 199 aa12.22□□□□□ -0.45
CPSF7-208ENST00000450000 LCE2AQ5TA79 106 aaPredicted RBP12.21□□□□□ -0.45
CPSF7-208ENST00000450000 MUSTN1Q8IVN3 82 aa12.2□□□□□ -0.46
CPSF7-208ENST00000450000 PRO1933Q9H354 126 aa12.2□□□□□ -0.46
CPSF7-208ENST00000450000 FAT4Q6V0I7 4981 aa12.2□□□□□ -0.46
CPSF7-208ENST00000450000 SNRPEP62304 92 aaKnown RBP12.18□□□□□ -0.46
CPSF7-208ENST00000450000 TRAV13-2A0A0B4J235 113 aa12.17□□□□□ -0.46
CPSF7-208ENST00000450000 A4D1N5 150 aa12.17□□□□□ -0.46
CPSF7-208ENST00000450000 PCP2Q8IVA1 136 aa12.17□□□□□ -0.46
CPSF7-208ENST00000450000 NHP2Q9NX24 153 aaKnown RBP12.17□□□□□ -0.46
CPSF7-208ENST00000450000 H7C2G1 150 aa12.16□□□□□ -0.46
CPSF7-208ENST00000450000 LINC01547P58512 204 aaPredicted RBP12.16□□□□□ -0.46
CPSF7-208ENST00000450000 S100A2P29034 98 aa12.15□□□□□ -0.46
CPSF7-208ENST00000450000 XP32Q5T750 250 aa12.15□□□□□ -0.46
CPSF7-208ENST00000450000 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
CPSF7-208ENST00000450000 CD164Q04900 197 aa12.14□□□□□ -0.47
CPSF7-208ENST00000450000 VAMP3Q15836 100 aa12.11□□□□□ -0.47
CPSF7-208ENST00000450000 KRTAP9-2Q9BYQ4 174 aa12.1□□□□□ -0.47
CPSF7-208ENST00000450000 C9orf92A6NGG3 77 aa12.09□□□□□ -0.47
CPSF7-208ENST00000450000 SMIM11BQ8TCY0 68 aa12.08□□□□□ -0.48
CPSF7-208ENST00000450000 IGLV5-48A0A075B6I7 105 aa12.06□□□□□ -0.48
CPSF7-208ENST00000450000 F8WEM9 126 aa12.06□□□□□ -0.48
CPSF7-208ENST00000450000 SMIM29Q86T20 159 aa12.05□□□□□ -0.48
CPSF7-208ENST00000450000 S100A6P06703 90 aa12.04□□□□□ -0.48
CPSF7-208ENST00000450000 KRTAP4-1Q9BYQ7 146 aa12.04□□□□□ -0.48
CPSF7-208ENST00000450000 HIST3H2BBQ8N257 126 aa12.03□□□□□ -0.48
CPSF7-208ENST00000450000 HIST1H2BLQ99880 126 aa12.02□□□□□ -0.49
CPSF7-208ENST00000450000 Q5XG85 94 aa12□□□□□ -0.49
CPSF7-208ENST00000450000 TCL1BO95988 128 aa11.99□□□□□ -0.49
CPSF7-208ENST00000450000 PCOTHQ58A44 107 aa11.99□□□□□ -0.49
CPSF7-208ENST00000450000 A0A0G2JQZ4 141 aa11.98□□□□□ -0.49
CPSF7-208ENST00000450000 IGLV8-61A0A075B6I0 122 aa11.97□□□□□ -0.49
CPSF7-208ENST00000450000 hADV29S1A0JD25 119 aa11.96□□□□□ -0.49
CPSF7-208ENST00000450000 C1orf195Q5TG92 126 aa11.96□□□□□ -0.49
CPSF7-208ENST00000450000 SCGB1D1O95968 90 aa11.95□□□□□ -0.5
CPSF7-208ENST00000450000 LINC00575Q6W349 94 aa11.95□□□□□ -0.5
CPSF7-208ENST00000450000 S100A1P23297 94 aa11.94□□□□□ -0.5
CPSF7-208ENST00000450000 HIST1H4GQ99525 98 aa11.94□□□□□ -0.5
CPSF7-208ENST00000450000 Q6ZQY7 126 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms