RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 GAGE2AQ6NT46 116 aa8.8□□□□□ -1
CHD3-205ENST00000449744 HIST1H2BLQ99880 126 aa8.8□□□□□ -1
CHD3-205ENST00000449744 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
CHD3-205ENST00000449744 IGLV6-57P01721 117 aa8.78□□□□□ -1
CHD3-205ENST00000449744 ADAMTSL4-AS1Q5T5F5 129 aa8.78□□□□□ -1
CHD3-205ENST00000449744 PET117Q6UWS5 81 aa8.78□□□□□ -1
CHD3-205ENST00000449744 Q8NBF4 154 aa8.78□□□□□ -1
CHD3-205ENST00000449744 TRAV23DV6A0A075B6W5 121 aa8.77□□□□□ -1.01
CHD3-205ENST00000449744 LINC00483Q53H64 154 aa8.77□□□□□ -1.01
CHD3-205ENST00000449744 SOSTDC1Q6X4U4 206 aa8.77□□□□□ -1.01
CHD3-205ENST00000449744 Q6ZRX8 168 aa8.77□□□□□ -1.01
CHD3-205ENST00000449744 CDIP1Q9H305 208 aa8.77□□□□□ -1.01
CHD3-205ENST00000449744 ERC2-IT1O76042 136 aa8.76□□□□□ -1.01
CHD3-205ENST00000449744 JOSD1Q15040 202 aaPredicted RBP8.76□□□□□ -1.01
CHD3-205ENST00000449744 LINC01545Q5VT33 79 aa8.76□□□□□ -1.01
CHD3-205ENST00000449744 CBY1Q9Y3M2 126 aa8.76□□□□□ -1.01
CHD3-205ENST00000449744 A0A0U1RQV1 116 aa8.75□□□□□ -1.01
CHD3-205ENST00000449744 SMIM6P0DI80 62 aa8.75□□□□□ -1.01
CHD3-205ENST00000449744 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
CHD3-205ENST00000449744 Q9BRP9 147 aa8.75□□□□□ -1.01
CHD3-205ENST00000449744 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
CHD3-205ENST00000449744 ZNF73O43830 326 aaPredicted RBP8.74□□□□□ -1.01
CHD3-205ENST00000449744 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
CHD3-205ENST00000449744 HINT1P49773 126 aaPredicted RBP8.74□□□□□ -1.01
CHD3-205ENST00000449744 ZNF815PA8K554 130 aa8.73□□□□□ -1.01
CHD3-205ENST00000449744 TIMM17BO60830 172 aa8.73□□□□□ -1.01
CHD3-205ENST00000449744 SPINK1P00995 79 aa8.73□□□□□ -1.01
CHD3-205ENST00000449744 KRTDAPP60985 99 aa8.73□□□□□ -1.01
CHD3-205ENST00000449744 MOBPQ13875 183 aa8.73□□□□□ -1.01
CHD3-205ENST00000449744 LINC00308Q8TCZ7 52 aa8.73□□□□□ -1.01
CHD3-205ENST00000449744 SPANXCQ9NY87 97 aa8.73□□□□□ -1.01
CHD3-205ENST00000449744 C20orf202A1L168 122 aa8.72□□□□□ -1.01
CHD3-205ENST00000449744 C3orf79P0CE67 100 aa8.72□□□□□ -1.01
CHD3-205ENST00000449744 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
CHD3-205ENST00000449744 OR13C6PQ8NH95 151 aa8.72□□□□□ -1.01
CHD3-205ENST00000449744 FP248Q71RG6 208 aaPredicted RBP8.71□□□□□ -1.02
CHD3-205ENST00000449744 LITAFQ99732 161 aa8.71□□□□□ -1.02
CHD3-205ENST00000449744 SCGB1D1O95968 90 aa8.7□□□□□ -1.02
CHD3-205ENST00000449744 TTTY13Q9BZ97 58 aa8.69□□□□□ -1.02
CHD3-205ENST00000449744 C9orf153Q5TBE3 101 aa8.68□□□□□ -1.02
CHD3-205ENST00000449744 C12orf57Q99622 126 aa8.68□□□□□ -1.02
CHD3-205ENST00000449744 SCGB1D4Q6XE38 83 aa8.67□□□□□ -1.02
CHD3-205ENST00000449744 LINC00518Q8N0U6 118 aa8.67□□□□□ -1.02
CHD3-205ENST00000449744 SPANXDQ9BXN6 97 aa8.67□□□□□ -1.02
CHD3-205ENST00000449744 ST20-AS1Q8NBB2 130 aa8.66□□□□□ -1.02
CHD3-205ENST00000449744 RPS29P62273 56 aaKnown RBP8.65□□□□□ -1.02
CHD3-205ENST00000449744 PYY3Q5JQD4 70 aa8.65□□□□□ -1.02
CHD3-205ENST00000449744 MUC2Q02817 5179 aa8.65□□□□□ -1.03
CHD3-205ENST00000449744 DHRS4-AS1Q9P1J3 65 aa8.64□□□□□ -1.03
CHD3-205ENST00000449744 COPS9Q8WXC6 57 aa8.63□□□□□ -1.03
CHD3-205ENST00000449744 SLC25A20O43772 301 aa8.62□□□□□ -1.03
CHD3-205ENST00000449744 COX7BP24311 80 aa8.62□□□□□ -1.03
CHD3-205ENST00000449744 ANKRD39Q53RE8 183 aa8.62□□□□□ -1.03
CHD3-205ENST00000449744 SLC25A34Q6PIV7 304 aa8.62□□□□□ -1.03
CHD3-205ENST00000449744 ATOH7Q8N100 152 aa8.62□□□□□ -1.03
CHD3-205ENST00000449744 HSBP1L1C9JCN9 74 aa8.61□□□□□ -1.03
CHD3-205ENST00000449744 C6orf99Q4VX62 202 aa8.61□□□□□ -1.03
CHD3-205ENST00000449744 Q8N377 158 aa8.61□□□□□ -1.03
CHD3-205ENST00000449744 VAMP8Q9BV40 100 aa8.61□□□□□ -1.03
CHD3-205ENST00000449744 IFITM1P13164 125 aa8.6□□□□□ -1.03
CHD3-205ENST00000449744 KRTAP13-3Q3SY46 172 aa8.6□□□□□ -1.03
CHD3-205ENST00000449744 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
CHD3-205ENST00000449744 MUC17Q685J3 4493 aa8.59□□□□□ -1.03
CHD3-205ENST00000449744 SPRR1BP22528 89 aa8.59□□□□□ -1.03
CHD3-205ENST00000449744 ELOF1P60002 83 aaKnown RBP8.59□□□□□ -1.03
CHD3-205ENST00000449744 Q6ZVH6 145 aa8.59□□□□□ -1.03
CHD3-205ENST00000449744 LAMTOR3Q9UHA4 124 aa8.59□□□□□ -1.03
CHD3-205ENST00000449744 A6NDN8 102 aa8.58□□□□□ -1.04
CHD3-205ENST00000449744 TSTD3H0UI37 97 aa8.57□□□□□ -1.04
CHD3-205ENST00000449744 TAL2Q16559 108 aa8.57□□□□□ -1.04
CHD3-205ENST00000449744 PCP2Q8IVA1 136 aa8.56□□□□□ -1.04
CHD3-205ENST00000449744 MUSTN1Q8IVN3 82 aa8.56□□□□□ -1.04
CHD3-205ENST00000449744 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
CHD3-205ENST00000449744 DEFB105AQ8NG35 78 aa8.55□□□□□ -1.04
CHD3-205ENST00000449744 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
CHD3-205ENST00000449744 LIMD2Q9BT23 127 aa8.54□□□□□ -1.04
CHD3-205ENST00000449744 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
CHD3-205ENST00000449744 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
CHD3-205ENST00000449744 A0A1B0GWB2 263 aa8.53□□□□□ -1.04
CHD3-205ENST00000449744 SPATA45Q537H7 98 aa8.53□□□□□ -1.04
CHD3-205ENST00000449744 HRCT1Q6UXD1 115 aa8.53□□□□□ -1.04
CHD3-205ENST00000449744 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.05
CHD3-205ENST00000449744 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
CHD3-205ENST00000449744 Q1RN00 199 aa8.52□□□□□ -1.05
CHD3-205ENST00000449744 FAT4Q6V0I7 4981 aa8.51□□□□□ -1.05
CHD3-205ENST00000449744 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
CHD3-205ENST00000449744 ASB16-AS1Q495Z4 193 aa8.51□□□□□ -1.05
CHD3-205ENST00000449744 PCP4L1A6NKN8 68 aa8.5□□□□□ -1.05
CHD3-205ENST00000449744 LCE2AQ5TA79 106 aaPredicted RBP8.5□□□□□ -1.05
CHD3-205ENST00000449744 PRO1933Q9H354 126 aa8.5□□□□□ -1.05
CHD3-205ENST00000449744 A4D1N5 150 aa8.49□□□□□ -1.05
CHD3-205ENST00000449744 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
CHD3-205ENST00000449744 SMIM11BQ8TCY0 68 aa8.47□□□□□ -1.05
CHD3-205ENST00000449744 H7C2G1 150 aa8.46□□□□□ -1.06
CHD3-205ENST00000449744 CD164Q04900 197 aa8.46□□□□□ -1.06
CHD3-205ENST00000449744 UQCR10Q9UDW1 63 aa8.46□□□□□ -1.06
CHD3-205ENST00000449744 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
CHD3-205ENST00000449744 VAMP3Q15836 100 aa8.44□□□□□ -1.06
CHD3-205ENST00000449744 XP32Q5T750 250 aa8.44□□□□□ -1.06
CHD3-205ENST00000449744 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms