RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
SCN10A-201ENST00000449082 COX6B2Q6YFQ2 88 aa6.69□□□□□ -1.34
SCN10A-201ENST00000449082 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
SCN10A-201ENST00000449082 K7EQZ3 153 aa6.69□□□□□ -1.34
SCN10A-201ENST00000449082 GOLGB1Q14789 3259 aaKnown RBP6.68□□□□□ -1.34
SCN10A-201ENST00000449082 KRTAP1-1Q07627 177 aa6.68□□□□□ -1.34
SCN10A-201ENST00000449082 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
SCN10A-201ENST00000449082 DSCR10P59022 87 aa6.67□□□□□ -1.34
SCN10A-201ENST00000449082 IGLV7-43P04211 117 aa6.66□□□□□ -1.34
SCN10A-201ENST00000449082 ZNF575Q86XF7 245 aa6.66□□□□□ -1.34
SCN10A-201ENST00000449082 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
SCN10A-201ENST00000449082 Q8N377 158 aa6.65□□□□□ -1.35
SCN10A-201ENST00000449082 CNBPP62633 177 aaKnown RBP6.64□□□□□ -1.35
SCN10A-201ENST00000449082 PRR15Q8IV56 129 aa6.64□□□□□ -1.35
SCN10A-201ENST00000449082 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
SCN10A-201ENST00000449082 OBSCN-AS1Q96MR7 158 aa6.64□□□□□ -1.35
SCN10A-201ENST00000449082 C9orf92A6NGG3 77 aa6.63□□□□□ -1.35
SCN10A-201ENST00000449082 IGLV8-61A0A075B6I0 122 aa6.63□□□□□ -1.35
SCN10A-201ENST00000449082 ERC2-IT1O76042 136 aa6.63□□□□□ -1.35
SCN10A-201ENST00000449082 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
SCN10A-201ENST00000449082 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
SCN10A-201ENST00000449082 EPG5Q9HCE0 2579 aa6.62□□□□□ -1.35
SCN10A-201ENST00000449082 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
SCN10A-201ENST00000449082 RPS28P62857 69 aaKnown RBP6.62□□□□□ -1.35
SCN10A-201ENST00000449082 CASC10Q5T4H9 136 aa6.6□□□□□ -1.35
SCN10A-201ENST00000449082 SPRR4Q96PI1 79 aa6.6□□□□□ -1.35
SCN10A-201ENST00000449082 ANAPC11Q9NYG5 84 aa6.59□□□□□ -1.35
SCN10A-201ENST00000449082 COA5Q86WW8 74 aa6.59□□□□□ -1.36
SCN10A-201ENST00000449082 PRO0628Q9UI54 55 aa6.58□□□□□ -1.36
SCN10A-201ENST00000449082 LINC01600Q96MT4 127 aa6.57□□□□□ -1.36
SCN10A-201ENST00000449082 RBM12B-AS1Q9P1G2 102 aa6.56□□□□□ -1.36
SCN10A-201ENST00000449082 A0A0G2JQZ4 141 aa6.56□□□□□ -1.36
SCN10A-201ENST00000449082 IGLV5-37A0A075B6J1 123 aa6.55□□□□□ -1.36
SCN10A-201ENST00000449082 C4orf26Q17RF5 130 aa6.54□□□□□ -1.36
SCN10A-201ENST00000449082 UQCR11O14957 56 aa6.53□□□□□ -1.36
SCN10A-201ENST00000449082 TNP2Q05952 138 aa6.52□□□□□ -1.37
SCN10A-201ENST00000449082 CYP4F30PQ9H0H9 118 aa6.51□□□□□ -1.37
SCN10A-201ENST00000449082 HECTD1Q9ULT8 2610 aa6.51□□□□□ -1.37
SCN10A-201ENST00000449082 FLNBO75369 2602 aaKnown RBP6.49□□□□□ -1.37
SCN10A-201ENST00000449082 A0A1W2PNM2 257 aa6.49□□□□□ -1.37
SCN10A-201ENST00000449082 WIPF1O43516 503 aa6.48□□□□□ -1.37
SCN10A-201ENST00000449082 KLKP1Q107X0 134 aa6.48□□□□□ -1.37
SCN10A-201ENST00000449082 A8MUN3 132 aa6.48□□□□□ -1.37
SCN10A-201ENST00000449082 CD164Q04900 197 aa6.47□□□□□ -1.37
SCN10A-201ENST00000449082 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
SCN10A-201ENST00000449082 IGLV5-48A0A075B6I7 105 aa6.46□□□□□ -1.38
SCN10A-201ENST00000449082 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
SCN10A-201ENST00000449082 UTRNP46939 3433 aa6.45□□□□□ -1.38
SCN10A-201ENST00000449082 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
SCN10A-201ENST00000449082 MGAM2Q2M2H8 2515 aa6.44□□□□□ -1.38
SCN10A-201ENST00000449082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
SCN10A-201ENST00000449082 USP24Q9UPU5 2620 aa6.43□□□□□ -1.38
SCN10A-201ENST00000449082 Q6ZSA8 131 aa6.42□□□□□ -1.38
SCN10A-201ENST00000449082 IGLV7-46A0A075B6I9 117 aa6.42□□□□□ -1.38
SCN10A-201ENST00000449082 Q8N1X5 172 aa6.41□□□□□ -1.38
SCN10A-201ENST00000449082 FAM104AQ969W3 186 aa6.41□□□□□ -1.38
SCN10A-201ENST00000449082 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.38
SCN10A-201ENST00000449082 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.38
SCN10A-201ENST00000449082 SPANXA2-OT1Q8N9U9 137 aa6.4□□□□□ -1.39
SCN10A-201ENST00000449082 H7BZZ5 65 aa6.38□□□□□ -1.39
SCN10A-201ENST00000449082 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
SCN10A-201ENST00000449082 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
SCN10A-201ENST00000449082 FLNAP21333 2647 aaKnown RBP6.37□□□□□ -1.39
SCN10A-201ENST00000449082 CR1P17927 2039 aa6.36□□□□□ -1.39
SCN10A-201ENST00000449082 DNAH12Q6ZR08 3092 aa6.35□□□□□ -1.39
SCN10A-201ENST00000449082 ITPR3Q14573 2671 aa6.34□□□□□ -1.39
SCN10A-201ENST00000449082 HELZ2Q9BYK8 2649 aaKnown RBP6.34□□□□□ -1.39
SCN10A-201ENST00000449082 A0A0D9SG42 100 aa6.34□□□□□ -1.4
SCN10A-201ENST00000449082 PRRC2CQ9Y520 2896 aaKnown RBP6.33□□□□□ -1.4
SCN10A-201ENST00000449082 BPTFQ12830 3046 aa6.32□□□□□ -1.4
SCN10A-201ENST00000449082 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
SCN10A-201ENST00000449082 M0R2T5 61 aa6.3□□□□□ -1.4
SCN10A-201ENST00000449082 OCR1Q9BZK8 76 aa6.29□□□□□ -1.4
SCN10A-201ENST00000449082 SPRR1AP35321 89 aa6.28□□□□□ -1.4
SCN10A-201ENST00000449082 ATRQ13535 2644 aa6.26□□□□□ -1.41
SCN10A-201ENST00000449082 ZCCHC13Q8WW36 166 aaKnown RBP6.26□□□□□ -1.41
SCN10A-201ENST00000449082 HRES1P13985 223 aa6.25□□□□□ -1.41
SCN10A-201ENST00000449082 LCE6AA0A183 80 aa6.25□□□□□ -1.41
SCN10A-201ENST00000449082 MAST4O15021 2626 aa6.23□□□□□ -1.41
SCN10A-201ENST00000449082 CFAP46Q8IYW2 2715 aa6.23□□□□□ -1.41
SCN10A-201ENST00000449082 SPRR1BP22528 89 aa6.23□□□□□ -1.41
SCN10A-201ENST00000449082 MMP24-AS1A0A0U1RRL7 71 aa6.23□□□□□ -1.41
SCN10A-201ENST00000449082 Q5VSD8 79 aa6.23□□□□□ -1.41
SCN10A-201ENST00000449082 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
SCN10A-201ENST00000449082 KRTAP1-5Q9BYS1 174 aa6.22□□□□□ -1.41
SCN10A-201ENST00000449082 Q8NDZ9 215 aa6.22□□□□□ -1.41
SCN10A-201ENST00000449082 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
SCN10A-201ENST00000449082 A0A1B0GU33 70 aa6.21□□□□□ -1.42
SCN10A-201ENST00000449082 S4R3F8 94 aa6.2□□□□□ -1.42
SCN10A-201ENST00000449082 SEC61BP60468 96 aaKnown RBP6.2□□□□□ -1.42
SCN10A-201ENST00000449082 KRTAP10-1P60331 282 aa6.18□□□□□ -1.42
SCN10A-201ENST00000449082 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
SCN10A-201ENST00000449082 KRTAP26-1Q6PEX3 210 aa6.18□□□□□ -1.42
SCN10A-201ENST00000449082 CHD7Q9P2D1 2997 aa6.17□□□□□ -1.42
SCN10A-201ENST00000449082 Q1T7F1 81 aa6.17□□□□□ -1.42
SCN10A-201ENST00000449082 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
SCN10A-201ENST00000449082 LCA10Q71F78 164 aa6.16□□□□□ -1.42
SCN10A-201ENST00000449082 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
SCN10A-201ENST00000449082 KRTAP10-2P60368 255 aa6.16□□□□□ -1.42
SCN10A-201ENST00000449082 Q5W150 140 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms