RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 HERVK_113P61574 105 aa5.61□□□□□ -1.51
SSBP3-209ENST00000448572 CD164Q04900 197 aa5.61□□□□□ -1.51
SSBP3-209ENST00000448572 DHRS4-AS1Q9P1J3 65 aa5.61□□□□□ -1.51
SSBP3-209ENST00000448572 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
SSBP3-209ENST00000448572 RPS10P5Q9NQ39 176 aa5.6□□□□□ -1.51
SSBP3-209ENST00000448572 PLNP26678 52 aa5.59□□□□□ -1.51
SSBP3-209ENST00000448572 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.51
SSBP3-209ENST00000448572 URB1-AS1Q96HZ7 61 aa5.59□□□□□ -1.51
SSBP3-209ENST00000448572 LEPROTO15243 131 aa5.58□□□□□ -1.52
SSBP3-209ENST00000448572 SPRR1BP22528 89 aa5.58□□□□□ -1.52
SSBP3-209ENST00000448572 PRO1933Q9H354 126 aa5.58□□□□□ -1.52
SSBP3-209ENST00000448572 H7C2G1 150 aa5.57□□□□□ -1.52
SSBP3-209ENST00000448572 HSBP1O75506 76 aa5.57□□□□□ -1.52
SSBP3-209ENST00000448572 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
SSBP3-209ENST00000448572 J3QQQ9 107 aa5.56□□□□□ -1.52
SSBP3-209ENST00000448572 Q5XG85 94 aa5.56□□□□□ -1.52
SSBP3-209ENST00000448572 HRCT1Q6UXD1 115 aa5.56□□□□□ -1.52
SSBP3-209ENST00000448572 AKR1D1P51857 326 aa5.55□□□□□ -1.52
SSBP3-209ENST00000448572 TAL2Q16559 108 aa5.55□□□□□ -1.52
SSBP3-209ENST00000448572 RPL37P61927 97 aaKnown RBP5.54□□□□□ -1.52
SSBP3-209ENST00000448572 NDUFA5Q16718 116 aa5.54□□□□□ -1.52
SSBP3-209ENST00000448572 ST20-AS1Q8NBB2 130 aa5.54□□□□□ -1.52
SSBP3-209ENST00000448572 OR13C6PQ8NH95 151 aa5.54□□□□□ -1.52
SSBP3-209ENST00000448572 H0Y8G0 127 aa5.53□□□□□ -1.52
SSBP3-209ENST00000448572 TCL1BO95988 128 aa5.53□□□□□ -1.52
SSBP3-209ENST00000448572 SPANXCQ9NY87 97 aa5.53□□□□□ -1.52
SSBP3-209ENST00000448572 TEX49A0A1B0GTD5 131 aa5.52□□□□□ -1.53
SSBP3-209ENST00000448572 DPM2O94777 84 aa5.52□□□□□ -1.53
SSBP3-209ENST00000448572 LEPROTL1O95214 131 aa5.52□□□□□ -1.53
SSBP3-209ENST00000448572 CFC1P0CG37 223 aa5.52□□□□□ -1.53
SSBP3-209ENST00000448572 SPANXDQ9BXN6 97 aa5.52□□□□□ -1.53
SSBP3-209ENST00000448572 HSPB8Q9UJY1 196 aa5.52□□□□□ -1.53
SSBP3-209ENST00000448572 SNAPINO95295 136 aa5.51□□□□□ -1.53
SSBP3-209ENST00000448572 C10orf91Q5T1B1 145 aa5.51□□□□□ -1.53
SSBP3-209ENST00000448572 LINC00518Q8N0U6 118 aa5.51□□□□□ -1.53
SSBP3-209ENST00000448572 COX7BP24311 80 aa5.5□□□□□ -1.53
SSBP3-209ENST00000448572 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
SSBP3-209ENST00000448572 IGKCP01834 107 aa5.49□□□□□ -1.53
SSBP3-209ENST00000448572 TSPEAR-AS2P59090 65 aa5.49□□□□□ -1.53
SSBP3-209ENST00000448572 ELOF1P60002 83 aaKnown RBP5.49□□□□□ -1.53
SSBP3-209ENST00000448572 Q1RN00 199 aa5.49□□□□□ -1.53
SSBP3-209ENST00000448572 SVBPQ8N300 66 aa5.49□□□□□ -1.53
SSBP3-209ENST00000448572 TRBV7-6A0A0J9YX20 115 aa5.48□□□□□ -1.53
SSBP3-209ENST00000448572 NPC2P61916 151 aa5.48□□□□□ -1.53
SSBP3-209ENST00000448572 C1orf195Q5TG92 126 aa5.48□□□□□ -1.53
SSBP3-209ENST00000448572 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
SSBP3-209ENST00000448572 DEFB105AQ8NG35 78 aa5.48□□□□□ -1.53
SSBP3-209ENST00000448572 COPS9Q8WXC6 57 aa5.48□□□□□ -1.53
SSBP3-209ENST00000448572 NHP2Q9NX24 153 aaKnown RBP5.48□□□□□ -1.53
SSBP3-209ENST00000448572 A0A0J9YXY3 114 aa5.47□□□□□ -1.53
SSBP3-209ENST00000448572 SMIM29Q86T20 159 aa5.47□□□□□ -1.53
SSBP3-209ENST00000448572 A0A1B0GWB2 263 aa5.46□□□□□ -1.54
SSBP3-209ENST00000448572 A4D1N5 150 aa5.46□□□□□ -1.54
SSBP3-209ENST00000448572 F8WEM9 126 aa5.46□□□□□ -1.54
SSBP3-209ENST00000448572 TIMM17BO60830 172 aa5.46□□□□□ -1.54
SSBP3-209ENST00000448572 APOC3P02656 99 aa5.46□□□□□ -1.54
SSBP3-209ENST00000448572 C6orf99Q4VX62 202 aa5.46□□□□□ -1.54
SSBP3-209ENST00000448572 Q6Q795 121 aa5.46□□□□□ -1.54
SSBP3-209ENST00000448572 E9PLD3 99 aa5.45□□□□□ -1.54
SSBP3-209ENST00000448572 SOSTDC1Q6X4U4 206 aa5.45□□□□□ -1.54
SSBP3-209ENST00000448572 LINC00308Q8TCZ7 52 aa5.45□□□□□ -1.54
SSBP3-209ENST00000448572 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.44□□□□□ -1.54
SSBP3-209ENST00000448572 ADAMTSL4-AS1Q5T5F5 129 aa5.44□□□□□ -1.54
SSBP3-209ENST00000448572 IGLV5-48A0A075B6I7 105 aa5.42□□□□□ -1.54
SSBP3-209ENST00000448572 TRBV20-1A0A075B6N2 111 aa5.42□□□□□ -1.54
SSBP3-209ENST00000448572 C20orf202A1L168 122 aa5.42□□□□□ -1.54
SSBP3-209ENST00000448572 ZNF815PA8K554 130 aa5.42□□□□□ -1.54
SSBP3-209ENST00000448572 FABP4P15090 132 aa5.41□□□□□ -1.54
SSBP3-209ENST00000448572 PCP2Q8IVA1 136 aa5.41□□□□□ -1.54
SSBP3-209ENST00000448572 SERF1AO75920 110 aa5.4□□□□□ -1.54
SSBP3-209ENST00000448572 Q6JHZ5 121 aa5.4□□□□□ -1.54
SSBP3-209ENST00000448572 Q75L30 129 aa5.4□□□□□ -1.54
SSBP3-209ENST00000448572 PMCHL2Q9BQD1 86 aa5.4□□□□□ -1.54
SSBP3-209ENST00000448572 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
SSBP3-209ENST00000448572 A6NDN8 102 aa5.38□□□□□ -1.55
SSBP3-209ENST00000448572 VAMP3Q15836 100 aa5.38□□□□□ -1.55
SSBP3-209ENST00000448572 IFITM1P13164 125 aa5.37□□□□□ -1.55
SSBP3-209ENST00000448572 SCGB1D4Q6XE38 83 aa5.37□□□□□ -1.55
SSBP3-209ENST00000448572 Q6ZVH6 145 aa5.37□□□□□ -1.55
SSBP3-209ENST00000448572 LITAFQ99732 161 aa5.37□□□□□ -1.55
SSBP3-209ENST00000448572 LINC00846Q9NV44 126 aa5.37□□□□□ -1.55
SSBP3-209ENST00000448572 TRAV13-2A0A0B4J235 113 aa5.36□□□□□ -1.55
SSBP3-209ENST00000448572 TRGC2P03986 189 aa5.36□□□□□ -1.55
SSBP3-209ENST00000448572 CLEC2BQ92478 149 aa5.35□□□□□ -1.55
SSBP3-209ENST00000448572 OBSCN-AS1Q96MR7 158 aa5.35□□□□□ -1.55
SSBP3-209ENST00000448572 YPEL4Q96NS1 127 aa5.35□□□□□ -1.55
SSBP3-209ENST00000448572 SCGB1D1O95968 90 aa5.34□□□□□ -1.55
SSBP3-209ENST00000448572 TRBV7-7A0A0K0K1E9 115 aa5.33□□□□□ -1.56
SSBP3-209ENST00000448572 SYS1-DBNDD2H3BUS1 97 aa5.33□□□□□ -1.56
SSBP3-209ENST00000448572 SLC7A5P1Q8MH63 180 aa5.33□□□□□ -1.56
SSBP3-209ENST00000448572 SS18L2Q9UHA2 77 aa5.33□□□□□ -1.56
SSBP3-209ENST00000448572 LST1O00453 97 aa5.32□□□□□ -1.56
SSBP3-209ENST00000448572 PET117Q6UWS5 81 aa5.32□□□□□ -1.56
SSBP3-209ENST00000448572 LINC00310P59036 64 aa5.31□□□□□ -1.56
SSBP3-209ENST00000448572 PPDPFLQ8WWR9 84 aa5.31□□□□□ -1.56
SSBP3-209ENST00000448572 Q96NJ1 140 aa5.31□□□□□ -1.56
SSBP3-209ENST00000448572 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
SSBP3-209ENST00000448572 A0A0G2JQZ4 141 aa5.3□□□□□ -1.56
SSBP3-209ENST00000448572 LINC01545Q5VT33 79 aa5.3□□□□□ -1.56
SSBP3-209ENST00000448572 FAM236DA0A1B0GTK5 79 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms