RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
SYNPO2-204ENST00000448416 ANKRD17O75179 2603 aaKnown RBP6.18□□□□□ -1.42
SYNPO2-204ENST00000448416 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
SYNPO2-204ENST00000448416 HCG22E2RYF7 251 aa6.17□□□□□ -1.42
SYNPO2-204ENST00000448416 POLQO75417 2590 aa6.17□□□□□ -1.42
SYNPO2-204ENST00000448416 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
SYNPO2-204ENST00000448416 LRRK2Q5S007 2527 aa6.16□□□□□ -1.42
SYNPO2-204ENST00000448416 DEFB4AO15263 64 aa6.16□□□□□ -1.42
SYNPO2-204ENST00000448416 Q8NBF4 154 aa6.16□□□□□ -1.42
SYNPO2-204ENST00000448416 GCN1Q92616 2671 aaKnown RBP6.16□□□□□ -1.42
SYNPO2-204ENST00000448416 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
SYNPO2-204ENST00000448416 NAV2Q8IVL1 2488 aa6.15□□□□□ -1.42
SYNPO2-204ENST00000448416 EGFEM1PQ0D2K5 195 aa6.15□□□□□ -1.42
SYNPO2-204ENST00000448416 PRR34Q9NV39 138 aa6.15□□□□□ -1.42
SYNPO2-204ENST00000448416 X6R8D5 127 aa6.15□□□□□ -1.42
SYNPO2-204ENST00000448416 TEX15Q9BXT5 2789 aa6.15□□□□□ -1.43
SYNPO2-204ENST00000448416 DEFB116Q30KQ4 102 aa6.15□□□□□ -1.43
SYNPO2-204ENST00000448416 LELP1Q5T871 98 aa6.14□□□□□ -1.43
SYNPO2-204ENST00000448416 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
SYNPO2-204ENST00000448416 UTP20O75691 2785 aaKnown RBP6.14□□□□□ -1.43
SYNPO2-204ENST00000448416 A6NED7 52 aa6.14□□□□□ -1.43
SYNPO2-204ENST00000448416 NDUFS5O43920 106 aa6.14□□□□□ -1.43
SYNPO2-204ENST00000448416 WFDC13Q8IUB5 93 aa6.14□□□□□ -1.43
SYNPO2-204ENST00000448416 HTN3P15516 51 aa6.13□□□□□ -1.43
SYNPO2-204ENST00000448416 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
SYNPO2-204ENST00000448416 CFAP46Q8IYW2 2715 aa6.13□□□□□ -1.43
SYNPO2-204ENST00000448416 LCA10Q71F78 164 aa6.12□□□□□ -1.43
SYNPO2-204ENST00000448416 NF1P21359 2839 aa6.12□□□□□ -1.43
SYNPO2-204ENST00000448416 SPRR4Q96PI1 79 aa6.12□□□□□ -1.43
SYNPO2-204ENST00000448416 KCNQ1DNQ9H478 68 aa6.12□□□□□ -1.43
SYNPO2-204ENST00000448416 WFDC10BQ8IUB3 73 aa6.11□□□□□ -1.43
SYNPO2-204ENST00000448416 DHRS4-AS1Q9P1J3 65 aa6.11□□□□□ -1.43
SYNPO2-204ENST00000448416 TNP2Q05952 138 aa6.11□□□□□ -1.43
SYNPO2-204ENST00000448416 SPANXA2-OT1Q8N9U9 137 aa6.1□□□□□ -1.43
SYNPO2-204ENST00000448416 DNAJC9-AS1A6NH13 148 aa6.1□□□□□ -1.43
SYNPO2-204ENST00000448416 C7orf33Q8WU49 177 aa6.1□□□□□ -1.43
SYNPO2-204ENST00000448416 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
SYNPO2-204ENST00000448416 Q75L30 129 aa6.09□□□□□ -1.43
SYNPO2-204ENST00000448416 Q9BRP9 147 aa6.09□□□□□ -1.43
SYNPO2-204ENST00000448416 A6NN06 94 aa6.09□□□□□ -1.43
SYNPO2-204ENST00000448416 CHD8Q9HCK8 2581 aa6.09□□□□□ -1.43
SYNPO2-204ENST00000448416 H0Y9P7 68 aa6.08□□□□□ -1.44
SYNPO2-204ENST00000448416 Q6ZRX8 168 aa6.08□□□□□ -1.44
SYNPO2-204ENST00000448416 DOPEY1Q5JWR5 2465 aa6.08□□□□□ -1.44
SYNPO2-204ENST00000448416 DEFB135Q30KP9 77 aa6.08□□□□□ -1.44
SYNPO2-204ENST00000448416 CENPEQ02224 2701 aa6.08□□□□□ -1.44
SYNPO2-204ENST00000448416 RPL37AP8A6NKH3 93 aa6.08□□□□□ -1.44
SYNPO2-204ENST00000448416 SERTAD4-AS1Q5TG53 156 aa6.07□□□□□ -1.44
SYNPO2-204ENST00000448416 C15orf56Q8N910 161 aa6.06□□□□□ -1.44
SYNPO2-204ENST00000448416 ACACBO00763 2458 aa6.06□□□□□ -1.44
SYNPO2-204ENST00000448416 FLNCQ14315 2725 aa6.06□□□□□ -1.44
SYNPO2-204ENST00000448416 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
SYNPO2-204ENST00000448416 CDC42SE1Q9NRR8 79 aa6.06□□□□□ -1.44
SYNPO2-204ENST00000448416 IGKV2D-24A0A075B6R9 120 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 H3BPC8 53 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 APOC4P55056 127 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 C7orf65Q6ZTY9 151 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 A0A0G2JQZ4 141 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 A0A1W2PNN7 141 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 PKD1L2Q7Z442 2459 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 COA5Q86WW8 74 aa6.05□□□□□ -1.44
SYNPO2-204ENST00000448416 HIVEP2P31629 2446 aa6.04□□□□□ -1.44
SYNPO2-204ENST00000448416 FAM208BQ5VWN6 2430 aa6.04□□□□□ -1.44
SYNPO2-204ENST00000448416 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
SYNPO2-204ENST00000448416 RPL37AP61513 92 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-204ENST00000448416 CASC2Q6XLA1 102 aa6.03□□□□□ -1.44
SYNPO2-204ENST00000448416 C11orf45Q8TAV5 145 aa6.03□□□□□ -1.44
SYNPO2-204ENST00000448416 KRTAP26-1Q6PEX3 210 aa6.02□□□□□ -1.45
SYNPO2-204ENST00000448416 A0A087WSZ3 146 aa6.02□□□□□ -1.45
SYNPO2-204ENST00000448416 SPART-AS1P0CW21 52 aa6.02□□□□□ -1.45
SYNPO2-204ENST00000448416 KRTAP4-16G5E9R7 235 aaPredicted RBP6.02□□□□□ -1.45
SYNPO2-204ENST00000448416 CCDC168Q8NDH2 2452 aa6.02□□□□□ -1.45
SYNPO2-204ENST00000448416 KRTAP29-1A8MX34 341 aaPredicted RBP6.01□□□□□ -1.45
SYNPO2-204ENST00000448416 MOBPQ13875 183 aa6.01□□□□□ -1.45
SYNPO2-204ENST00000448416 SPTBN4Q9H254 2564 aa6.01□□□□□ -1.45
SYNPO2-204ENST00000448416 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
SYNPO2-204ENST00000448416 F8P00451 2351 aa6.01□□□□□ -1.45
SYNPO2-204ENST00000448416 ABCA12Q86UK0 2595 aa6.01□□□□□ -1.45
SYNPO2-204ENST00000448416 C4orf48Q5BLP8 95 aa6.01□□□□□ -1.45
SYNPO2-204ENST00000448416 IGLV1-50A0A075B6I6 118 aa6□□□□□ -1.45
SYNPO2-204ENST00000448416 IGFL1Q6UW32 110 aa6□□□□□ -1.45
SYNPO2-204ENST00000448416 MYO18BQ8IUG5 2567 aa6□□□□□ -1.45
SYNPO2-204ENST00000448416 SPAG11AQ6PDA7 123 aa6□□□□□ -1.45
SYNPO2-204ENST00000448416 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
SYNPO2-204ENST00000448416 SPRR1AP35321 89 aa5.99□□□□□ -1.45
SYNPO2-204ENST00000448416 Q8NAQ8 132 aa5.99□□□□□ -1.45
SYNPO2-204ENST00000448416 IGLV7-46A0A075B6I9 117 aa5.98□□□□□ -1.45
SYNPO2-204ENST00000448416 KRTAP10-9P60411 292 aa5.97□□□□□ -1.45
SYNPO2-204ENST00000448416 LINC01558Q9Y6Z2 57 aa5.97□□□□□ -1.45
SYNPO2-204ENST00000448416 C8orf87E5RJ46 101 aa5.97□□□□□ -1.45
SYNPO2-204ENST00000448416 DEFB113Q30KQ7 82 aa5.97□□□□□ -1.45
SYNPO2-204ENST00000448416 PCOTHQ58A44 107 aa5.96□□□□□ -1.45
SYNPO2-204ENST00000448416 CNBPP62633 177 aaKnown RBP5.96□□□□□ -1.46
SYNPO2-204ENST00000448416 PLA2G2DQ9UNK4 145 aa5.96□□□□□ -1.46
SYNPO2-204ENST00000448416 UNC79Q9P2D8 2635 aa5.96□□□□□ -1.46
SYNPO2-204ENST00000448416 MTORP42345 2549 aa5.95□□□□□ -1.46
SYNPO2-204ENST00000448416 SPINK7P58062 85 aa5.95□□□□□ -1.46
SYNPO2-204ENST00000448416 CACNA1AO00555 2505 aa5.94□□□□□ -1.46
SYNPO2-204ENST00000448416 IGLV5-37A0A075B6J1 123 aa5.93□□□□□ -1.46
SYNPO2-204ENST00000448416 TLX1NBP0CAT3 122 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms