RNA–Protein interactions for RNA: ENST00000448012.6

NPIPB3-202, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 1 (best) BASIC

Gene NPIPB3, Length 1,216 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-202ENST00000448012 TSPAN13O95857 204 aa6.52□□□□□ -1.37
NPIPB3-202ENST00000448012 COL5A1-AS1Q5SY13 56 aa6.52□□□□□ -1.37
NPIPB3-202ENST00000448012 TMEM126AQ9H061 195 aa6.52□□□□□ -1.37
NPIPB3-202ENST00000448012 MYMXA0A1B0GTQ4 84 aa6.51□□□□□ -1.37
NPIPB3-202ENST00000448012 PRLHP81277 87 aa6.51□□□□□ -1.37
NPIPB3-202ENST00000448012 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
NPIPB3-202ENST00000448012 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
NPIPB3-202ENST00000448012 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
NPIPB3-202ENST00000448012 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
NPIPB3-202ENST00000448012 TMEM238C9JI98 176 aa6.5□□□□□ -1.37
NPIPB3-202ENST00000448012 M0R378 163 aa6.5□□□□□ -1.37
NPIPB3-202ENST00000448012 LEPROTO15243 131 aa6.5□□□□□ -1.37
NPIPB3-202ENST00000448012 BVES-AS1Q5T3Y7 98 aa6.5□□□□□ -1.37
NPIPB3-202ENST00000448012 J3QQQ9 107 aa6.49□□□□□ -1.37
NPIPB3-202ENST00000448012 SMIM13P0DJ93 91 aa6.49□□□□□ -1.37
NPIPB3-202ENST00000448012 LGALS3P17931 250 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-202ENST00000448012 HIGD2AQ9BW72 106 aa6.49□□□□□ -1.37
NPIPB3-202ENST00000448012 NDUFA12Q9UI09 145 aa6.49□□□□□ -1.37
NPIPB3-202ENST00000448012 A0A087X002 238 aa6.48□□□□□ -1.37
NPIPB3-202ENST00000448012 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
NPIPB3-202ENST00000448012 TAL2Q16559 108 aa6.48□□□□□ -1.37
NPIPB3-202ENST00000448012 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
NPIPB3-202ENST00000448012 ZNF706Q9Y5V0 76 aaPredicted RBP6.48□□□□□ -1.37
NPIPB3-202ENST00000448012 A0A1B0GV90 55 aa6.47□□□□□ -1.37
NPIPB3-202ENST00000448012 A6NDN8 102 aa6.47□□□□□ -1.37
NPIPB3-202ENST00000448012 SCGB1D4Q6XE38 83 aa6.47□□□□□ -1.37
NPIPB3-202ENST00000448012 MIR7-3HGQ8N6C7 128 aa6.47□□□□□ -1.37
NPIPB3-202ENST00000448012 LINC00304Q8N9R0 145 aa6.47□□□□□ -1.37
NPIPB3-202ENST00000448012 ANAPC11Q9NYG5 84 aa6.47□□□□□ -1.37
NPIPB3-202ENST00000448012 ETDCA0A1B0GVM5 59 aa6.46□□□□□ -1.38
NPIPB3-202ENST00000448012 PRYO14603 147 aa6.46□□□□□ -1.38
NPIPB3-202ENST00000448012 NCR3O14931 201 aa6.45□□□□□ -1.38
NPIPB3-202ENST00000448012 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
NPIPB3-202ENST00000448012 SPANXB1Q9NS25 103 aaPredicted RBP6.44□□□□□ -1.38
NPIPB3-202ENST00000448012 CEND1Q8N111 149 aa6.43□□□□□ -1.38
NPIPB3-202ENST00000448012 Q8NDZ9 215 aa6.43□□□□□ -1.38
NPIPB3-202ENST00000448012 LRP2P98164 4655 aa6.43□□□□□ -1.38
NPIPB3-202ENST00000448012 FXYD2P54710 66 aa6.42□□□□□ -1.38
NPIPB3-202ENST00000448012 KRTAP13-2Q52LG2 175 aa6.42□□□□□ -1.38
NPIPB3-202ENST00000448012 SPAG11AQ6PDA7 123 aa6.42□□□□□ -1.38
NPIPB3-202ENST00000448012 LINC00337Q8N6G1 96 aa6.42□□□□□ -1.38
NPIPB3-202ENST00000448012 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
NPIPB3-202ENST00000448012 S100A7L2Q5SY68 101 aa6.41□□□□□ -1.38
NPIPB3-202ENST00000448012 KCNQ1DNQ9H478 68 aa6.41□□□□□ -1.38
NPIPB3-202ENST00000448012 A0A0J9YXY3 114 aa6.4□□□□□ -1.38
NPIPB3-202ENST00000448012 TRBV10-3A0A0K0K1G6 114 aa6.4□□□□□ -1.38
NPIPB3-202ENST00000448012 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
NPIPB3-202ENST00000448012 SPRR4Q96PI1 79 aa6.4□□□□□ -1.38
NPIPB3-202ENST00000448012 CBY1Q9Y3M2 126 aa6.4□□□□□ -1.38
NPIPB3-202ENST00000448012 A0A0U1RQV1 116 aa6.39□□□□□ -1.39
NPIPB3-202ENST00000448012 TIMM17BO60830 172 aa6.39□□□□□ -1.39
NPIPB3-202ENST00000448012 DAND5Q8N907 189 aa6.39□□□□□ -1.39
NPIPB3-202ENST00000448012 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
NPIPB3-202ENST00000448012 NHP2Q9NX24 153 aaKnown RBP6.39□□□□□ -1.39
NPIPB3-202ENST00000448012 A0A1B0GWB2 263 aa6.38□□□□□ -1.39
NPIPB3-202ENST00000448012 SPRR1AP35321 89 aa6.38□□□□□ -1.39
NPIPB3-202ENST00000448012 XP32Q5T750 250 aa6.38□□□□□ -1.39
NPIPB3-202ENST00000448012 C3orf22Q8N5N4 141 aa6.38□□□□□ -1.39
NPIPB3-202ENST00000448012 SPANXDQ9BXN6 97 aa6.38□□□□□ -1.39
NPIPB3-202ENST00000448012 SPANXCQ9NY87 97 aa6.38□□□□□ -1.39
NPIPB3-202ENST00000448012 LOC107984156A0A0G2JMH3 177 aa6.37□□□□□ -1.39
NPIPB3-202ENST00000448012 K7ERJ3 54 aa6.37□□□□□ -1.39
NPIPB3-202ENST00000448012 NDUFC2O95298 119 aa6.37□□□□□ -1.39
NPIPB3-202ENST00000448012 Q6ZVH6 145 aa6.37□□□□□ -1.39
NPIPB3-202ENST00000448012 ARL17AQ8IVW1 177 aa6.37□□□□□ -1.39
NPIPB3-202ENST00000448012 RETNLBQ9BQ08 111 aa6.37□□□□□ -1.39
NPIPB3-202ENST00000448012 PPDPFQ9H3Y8 114 aa6.37□□□□□ -1.39
NPIPB3-202ENST00000448012 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
NPIPB3-202ENST00000448012 C9orf118A6NHY6 69 aa6.36□□□□□ -1.39
NPIPB3-202ENST00000448012 LITAFQ99732 161 aa6.36□□□□□ -1.39
NPIPB3-202ENST00000448012 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
NPIPB3-202ENST00000448012 RAB37Q96AX2 223 aa6.35□□□□□ -1.39
NPIPB3-202ENST00000448012 B5MCH6 92 aa6.34□□□□□ -1.39
NPIPB3-202ENST00000448012 H3BUT2 72 aa6.34□□□□□ -1.39
NPIPB3-202ENST00000448012 IFITM1P13164 125 aa6.34□□□□□ -1.39
NPIPB3-202ENST00000448012 NPC2P61916 151 aa6.34□□□□□ -1.39
NPIPB3-202ENST00000448012 VAMP3Q15836 100 aa6.34□□□□□ -1.39
NPIPB3-202ENST00000448012 COPS9Q8WXC6 57 aa6.34□□□□□ -1.39
NPIPB3-202ENST00000448012 TRAV23DV6A0A075B6W5 121 aa6.33□□□□□ -1.4
NPIPB3-202ENST00000448012 Q6ZRX8 168 aa6.33□□□□□ -1.4
NPIPB3-202ENST00000448012 Q8NBF4 154 aa6.33□□□□□ -1.4
NPIPB3-202ENST00000448012 OR13C6PQ8NH95 151 aa6.33□□□□□ -1.4
NPIPB3-202ENST00000448012 RNF213Q63HN8 5207 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 IGLV9-49A0A0B4J1Y8 123 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 A0A1W2PPM0 123 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 A4D1N5 150 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 KRTAP4-16G5E9R7 235 aaPredicted RBP6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 SPINK1P00995 79 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 FABP2P12104 132 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
NPIPB3-202ENST00000448012 ZNF73O43830 326 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-202ENST00000448012 IGLV6-57P01721 117 aa6.31□□□□□ -1.4
NPIPB3-202ENST00000448012 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
NPIPB3-202ENST00000448012 ADAMTSL4-AS1Q5T5F5 129 aa6.31□□□□□ -1.4
NPIPB3-202ENST00000448012 GTF2H5Q6ZYL4 71 aa6.31□□□□□ -1.4
NPIPB3-202ENST00000448012 FP248Q71RG6 208 aaPredicted RBP6.31□□□□□ -1.4
NPIPB3-202ENST00000448012 NAA38Q9BRA0 125 aaKnown RBP6.31□□□□□ -1.4
NPIPB3-202ENST00000448012 LPAP08519 4548 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms