RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 AKR1D1P51857 326 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BDP58876 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BCP62807 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST2H2BEQ16778 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.98□□□□□ -1.77
LRRC28-203ENST00000447360 SFTA2Q6UW10 78 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 NKAPP1Q8N9T2 125 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BHQ93079 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BNQ99877 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 HIST1H2BMQ99879 126 aa3.98□□□□□ -1.77
LRRC28-203ENST00000447360 SMIM13P0DJ93 91 aa3.97□□□□□ -1.77
LRRC28-203ENST00000447360 FABP4P15090 132 aa3.97□□□□□ -1.77
LRRC28-203ENST00000447360 LINC00158P58513 81 aa3.97□□□□□ -1.77
LRRC28-203ENST00000447360 TMEM238C9JI98 176 aa3.96□□□□□ -1.78
LRRC28-203ENST00000447360 M0R378 163 aa3.96□□□□□ -1.78
LRRC28-203ENST00000447360 TSPEAR-AS2P59090 65 aa3.96□□□□□ -1.78
LRRC28-203ENST00000447360 PMCHL2Q9BQD1 86 aa3.96□□□□□ -1.78
LRRC28-203ENST00000447360 TMEM126AQ9H061 195 aa3.96□□□□□ -1.78
LRRC28-203ENST00000447360 LEPROTO15243 131 aa3.95□□□□□ -1.78
LRRC28-203ENST00000447360 C3orf22Q8N5N4 141 aa3.95□□□□□ -1.78
LRRC28-203ENST00000447360 MIR7-3HGQ8N6C7 128 aa3.95□□□□□ -1.78
LRRC28-203ENST00000447360 DAND5Q8N907 189 aa3.95□□□□□ -1.78
LRRC28-203ENST00000447360 KRTAP9-3Q9BYQ3 159 aa3.95□□□□□ -1.78
LRRC28-203ENST00000447360 NDUFA12Q9UI09 145 aa3.95□□□□□ -1.78
LRRC28-203ENST00000447360 IGLV9-49A0A0B4J1Y8 123 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 LOC107984156A0A0G2JMH3 177 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 MYMXA0A1B0GTQ4 84 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 DPM2O94777 84 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 S100A6P06703 90 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 PRLHP81277 87 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 ARL17AQ8IVW1 177 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 PLEKHB2Q96CS7 222 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 HSPB8Q9UJY1 196 aa3.94□□□□□ -1.78
LRRC28-203ENST00000447360 LINC00587B1AMM8 73 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 J3QQQ9 107 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 SPINK1P00995 79 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 IGKCP01834 107 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 PLNP26678 52 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 MEIG1Q5JSS6 88 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 Q6ZVQ6 151 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 FAM19A1Q7Z5A9 133 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 BOD1L2Q8IYS8 172 aa3.93□□□□□ -1.78
LRRC28-203ENST00000447360 KRTAP4-16G5E9R7 235 aaPredicted RBP3.92□□□□□ -1.78
LRRC28-203ENST00000447360 SYS1-DBNDD2H3BUS1 97 aa3.92□□□□□ -1.78
LRRC28-203ENST00000447360 SPRR1AP35321 89 aa3.92□□□□□ -1.78
LRRC28-203ENST00000447360 MAP1LC3CQ9BXW4 147 aa3.92□□□□□ -1.78
LRRC28-203ENST00000447360 KRTAP4-2Q9BYR5 136 aa3.92□□□□□ -1.78
LRRC28-203ENST00000447360 KCNQ1DNQ9H478 68 aa3.92□□□□□ -1.78
LRRC28-203ENST00000447360 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
LRRC28-203ENST00000447360 TRBV10-3A0A0K0K1G6 114 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 E9PLD3 99 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 M0R2T5 61 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 NCR3O14931 201 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 ADAMTSL4-AS1Q5T5F5 129 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 LINC00518Q8N0U6 118 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 USH2AO75445 5202 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 SSPOA2VEC9 5147 aa3.91□□□□□ -1.78
LRRC28-203ENST00000447360 A0A0J9YXY3 114 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 S100A2P29034 98 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 NMUP48645 174 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 HERVK_113P61574 105 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 LINC01545Q5VT33 79 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 SOSTDC1Q6X4U4 206 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 HIST3H2BBQ8N257 126 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 Q8NBF4 154 aa3.9□□□□□ -1.79
LRRC28-203ENST00000447360 C3orf79P0CE67 100 aa3.89□□□□□ -1.79
LRRC28-203ENST00000447360 LGALS3P17931 250 aaKnown RBP3.89□□□□□ -1.79
LRRC28-203ENST00000447360 RPS29P62273 56 aaKnown RBP3.89□□□□□ -1.79
LRRC28-203ENST00000447360 SMCR5Q8TEV8 140 aa3.89□□□□□ -1.79
LRRC28-203ENST00000447360 SPRR4Q96PI1 79 aa3.89□□□□□ -1.79
LRRC28-203ENST00000447360 LITAFQ99732 161 aa3.89□□□□□ -1.79
LRRC28-203ENST00000447360 HIGD2AQ9BW72 106 aa3.89□□□□□ -1.79
LRRC28-203ENST00000447360 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-203ENST00000447360 IGLV8-61A0A075B6I0 122 aa3.88□□□□□ -1.79
LRRC28-203ENST00000447360 TRBV10-2A0A0K0K1G8 114 aa3.88□□□□□ -1.79
LRRC28-203ENST00000447360 C20orf202A1L168 122 aa3.88□□□□□ -1.79
LRRC28-203ENST00000447360 NDUFC2O95298 119 aa3.88□□□□□ -1.79
LRRC28-203ENST00000447360 Q8N377 158 aa3.88□□□□□ -1.79
LRRC28-203ENST00000447360 HIST1H2BLQ99880 126 aa3.88□□□□□ -1.79
LRRC28-203ENST00000447360 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
LRRC28-203ENST00000447360 ZNF706Q9Y5V0 76 aaPredicted RBP3.88□□□□□ -1.79
LRRC28-203ENST00000447360 SLC25A20O43772 301 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 ERC2-IT1O76042 136 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 IGLV6-57P01721 117 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 DDTP30046 118 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 SEC61GP60059 68 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 NPC2P61916 151 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 PCOTHQ58A44 107 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 TTTY13Q9BZ97 58 aa3.87□□□□□ -1.79
LRRC28-203ENST00000447360 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
LRRC28-203ENST00000447360 LINC00483Q53H64 154 aa3.86□□□□□ -1.79
LRRC28-203ENST00000447360 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
LRRC28-203ENST00000447360 Q9BRP9 147 aa3.86□□□□□ -1.79
LRRC28-203ENST00000447360 SPANXB1Q9NS25 103 aaPredicted RBP3.86□□□□□ -1.79
LRRC28-203ENST00000447360 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
LRRC28-203ENST00000447360 TIMM17BO60830 172 aa3.85□□□□□ -1.79
LRRC28-203ENST00000447360 KRTDAPP60985 99 aa3.85□□□□□ -1.79
LRRC28-203ENST00000447360 MIEN1Q9BRT3 115 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms