RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 S100A12P80511 92 aa7.54□□□□□ -1.2
SHANK2-209ENST00000445654 FLGP20930 4061 aaPredicted RBP7.53□□□□□ -1.2
SHANK2-209ENST00000445654 C3orf79P0CE67 100 aa7.53□□□□□ -1.2
SHANK2-209ENST00000445654 CFC1P0CG37 223 aa7.53□□□□□ -1.2
SHANK2-209ENST00000445654 S100A2P29034 98 aa7.53□□□□□ -1.2
SHANK2-209ENST00000445654 PET117Q6UWS5 81 aa7.53□□□□□ -1.2
SHANK2-209ENST00000445654 SPRR1AP35321 89 aa7.52□□□□□ -1.21
SHANK2-209ENST00000445654 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
SHANK2-209ENST00000445654 LIMD2Q9BT23 127 aa7.52□□□□□ -1.21
SHANK2-209ENST00000445654 HERVK_113P61574 105 aa7.51□□□□□ -1.21
SHANK2-209ENST00000445654 HIST3H2BBQ8N257 126 aa7.5□□□□□ -1.21
SHANK2-209ENST00000445654 Q8NDZ9 215 aa7.5□□□□□ -1.21
SHANK2-209ENST00000445654 KCNQ1DNQ9H478 68 aa7.5□□□□□ -1.21
SHANK2-209ENST00000445654 USH2AO75445 5202 aa7.49□□□□□ -1.21
SHANK2-209ENST00000445654 LEPROTO15243 131 aa7.49□□□□□ -1.21
SHANK2-209ENST00000445654 SNRPEP62304 92 aaKnown RBP7.49□□□□□ -1.21
SHANK2-209ENST00000445654 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
SHANK2-209ENST00000445654 C20orf202A1L168 122 aa7.48□□□□□ -1.21
SHANK2-209ENST00000445654 C9orf92A6NGG3 77 aa7.48□□□□□ -1.21
SHANK2-209ENST00000445654 C9orf153Q5TBE3 101 aa7.48□□□□□ -1.21
SHANK2-209ENST00000445654 SSPOA2VEC9 5147 aa7.48□□□□□ -1.21
SHANK2-209ENST00000445654 MYMXA0A1B0GTQ4 84 aa7.47□□□□□ -1.21
SHANK2-209ENST00000445654 KRTAP4-16G5E9R7 235 aaPredicted RBP7.47□□□□□ -1.21
SHANK2-209ENST00000445654 J3QQQ9 107 aa7.47□□□□□ -1.21
SHANK2-209ENST00000445654 LINC00158P58513 81 aa7.47□□□□□ -1.21
SHANK2-209ENST00000445654 HIST1H2BLQ99880 126 aa7.47□□□□□ -1.21
SHANK2-209ENST00000445654 A0A0U1RRA0 63 aa7.46□□□□□ -1.22
SHANK2-209ENST00000445654 LGALS3P17931 250 aaKnown RBP7.46□□□□□ -1.22
SHANK2-209ENST00000445654 FCGBPQ9Y6R7 5405 aaPredicted RBP7.45□□□□□ -1.22
SHANK2-209ENST00000445654 E9PLD3 99 aa7.45□□□□□ -1.22
SHANK2-209ENST00000445654 IGLV6-57P01721 117 aa7.45□□□□□ -1.22
SHANK2-209ENST00000445654 TSPEAR-AS2P59090 65 aa7.45□□□□□ -1.22
SHANK2-209ENST00000445654 HERV-K104P63124 156 aa7.45□□□□□ -1.22
SHANK2-209ENST00000445654 MEIG1Q5JSS6 88 aa7.45□□□□□ -1.22
SHANK2-209ENST00000445654 C5orf52A6NGY3 159 aa7.44□□□□□ -1.22
SHANK2-209ENST00000445654 LINC00587B1AMM8 73 aa7.43□□□□□ -1.22
SHANK2-209ENST00000445654 B5MCH6 92 aa7.43□□□□□ -1.22
SHANK2-209ENST00000445654 SMIM13P0DJ93 91 aa7.43□□□□□ -1.22
SHANK2-209ENST00000445654 NMUP48645 174 aa7.43□□□□□ -1.22
SHANK2-209ENST00000445654 AKR1D1P51857 326 aa7.43□□□□□ -1.22
SHANK2-209ENST00000445654 ATOH7Q8N100 152 aa7.43□□□□□ -1.22
SHANK2-209ENST00000445654 BOD1L2Q8IYS8 172 aa7.42□□□□□ -1.22
SHANK2-209ENST00000445654 TRBV10-3A0A0K0K1G6 114 aa7.4□□□□□ -1.22
SHANK2-209ENST00000445654 NCR3O14931 201 aa7.4□□□□□ -1.22
SHANK2-209ENST00000445654 ERC2-IT1O76042 136 aa7.4□□□□□ -1.22
SHANK2-209ENST00000445654 RPL37P61927 97 aaKnown RBP7.4□□□□□ -1.22
SHANK2-209ENST00000445654 JOSD1Q15040 202 aaPredicted RBP7.4□□□□□ -1.22
SHANK2-209ENST00000445654 SCGB1D1O95968 90 aa7.39□□□□□ -1.23
SHANK2-209ENST00000445654 Q6ZRX8 168 aa7.39□□□□□ -1.23
SHANK2-209ENST00000445654 MIR7-3HGQ8N6C7 128 aa7.39□□□□□ -1.23
SHANK2-209ENST00000445654 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
SHANK2-209ENST00000445654 SLC25A34Q6PIV7 304 aa7.38□□□□□ -1.23
SHANK2-209ENST00000445654 A0A0J9YXY3 114 aa7.37□□□□□ -1.23
SHANK2-209ENST00000445654 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
SHANK2-209ENST00000445654 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
SHANK2-209ENST00000445654 ANKRD39Q53RE8 183 aa7.37□□□□□ -1.23
SHANK2-209ENST00000445654 Q9BRP9 147 aa7.37□□□□□ -1.23
SHANK2-209ENST00000445654 TTTY13Q9BZ97 58 aa7.37□□□□□ -1.23
SHANK2-209ENST00000445654 MIEN1Q9BRT3 115 aa7.35□□□□□ -1.23
SHANK2-209ENST00000445654 DDTP30046 118 aa7.34□□□□□ -1.23
SHANK2-209ENST00000445654 ADAMTSL4-AS1Q5T5F5 129 aa7.34□□□□□ -1.23
SHANK2-209ENST00000445654 Q6Q795 121 aa7.34□□□□□ -1.23
SHANK2-209ENST00000445654 SCGB1D4Q6XE38 83 aa7.34□□□□□ -1.23
SHANK2-209ENST00000445654 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
SHANK2-209ENST00000445654 MACF1Q9UPN3 7388 aaKnown RBP7.34□□□□□ -1.24
SHANK2-209ENST00000445654 TRBV10-2A0A0K0K1G8 114 aa7.33□□□□□ -1.24
SHANK2-209ENST00000445654 NPC2P61916 151 aa7.33□□□□□ -1.24
SHANK2-209ENST00000445654 CD164Q04900 197 aa7.33□□□□□ -1.24
SHANK2-209ENST00000445654 HRCT1Q6UXD1 115 aa7.32□□□□□ -1.24
SHANK2-209ENST00000445654 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
SHANK2-209ENST00000445654 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
SHANK2-209ENST00000445654 TIMM17BO60830 172 aa7.31□□□□□ -1.24
SHANK2-209ENST00000445654 KRTAP9-8Q9BYQ0 159 aa7.31□□□□□ -1.24
SHANK2-209ENST00000445654 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
SHANK2-209ENST00000445654 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
SHANK2-209ENST00000445654 LITAFQ99732 161 aa7.29□□□□□ -1.24
SHANK2-209ENST00000445654 LAMTOR3Q9UHA4 124 aa7.29□□□□□ -1.24
SHANK2-209ENST00000445654 CBY1Q9Y3M2 126 aa7.29□□□□□ -1.24
SHANK2-209ENST00000445654 HINT1P49773 126 aaPredicted RBP7.28□□□□□ -1.24
SHANK2-209ENST00000445654 Q5XG85 94 aa7.28□□□□□ -1.24
SHANK2-209ENST00000445654 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
SHANK2-209ENST00000445654 LINC00308Q8TCZ7 52 aa7.28□□□□□ -1.24
SHANK2-209ENST00000445654 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
SHANK2-209ENST00000445654 SPRR1BP22528 89 aa7.27□□□□□ -1.25
SHANK2-209ENST00000445654 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
SHANK2-209ENST00000445654 SPANXB1Q9NS25 103 aaPredicted RBP7.27□□□□□ -1.25
SHANK2-209ENST00000445654 H7C2G1 150 aa7.26□□□□□ -1.25
SHANK2-209ENST00000445654 NDUFC2O95298 119 aa7.26□□□□□ -1.25
SHANK2-209ENST00000445654 ST20-AS1Q8NBB2 130 aa7.26□□□□□ -1.25
SHANK2-209ENST00000445654 VAMP8Q9BV40 100 aa7.26□□□□□ -1.25
SHANK2-209ENST00000445654 PAM16Q9Y3D7 125 aa7.26□□□□□ -1.25
SHANK2-209ENST00000445654 SYNE2Q8WXH0 6885 aaKnown RBP7.26□□□□□ -1.25
SHANK2-209ENST00000445654 TRAV23DV6A0A075B6W5 121 aa7.25□□□□□ -1.25
SHANK2-209ENST00000445654 SPATA45Q537H7 98 aa7.25□□□□□ -1.25
SHANK2-209ENST00000445654 COPS9Q8WXC6 57 aa7.25□□□□□ -1.25
SHANK2-209ENST00000445654 SPANXDQ9BXN6 97 aa7.25□□□□□ -1.25
SHANK2-209ENST00000445654 PRO1933Q9H354 126 aa7.25□□□□□ -1.25
SHANK2-209ENST00000445654 SPANXCQ9NY87 97 aa7.25□□□□□ -1.25
SHANK2-209ENST00000445654 Q6ZVH6 145 aa7.24□□□□□ -1.25
SHANK2-209ENST00000445654 ZNF73O43830 326 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms