RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 KRTAP1-4P0C5Y4 121 aa6.22□□□□□ -1.41
HLA-DQB1-206ENST00000443574 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
HLA-DQB1-206ENST00000443574 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
HLA-DQB1-206ENST00000443574 LINC00337Q8N6G1 96 aa6.22□□□□□ -1.41
HLA-DQB1-206ENST00000443574 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
HLA-DQB1-206ENST00000443574 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
HLA-DQB1-206ENST00000443574 ADAMTSL4-AS1Q5T5F5 129 aa6.21□□□□□ -1.42
HLA-DQB1-206ENST00000443574 HIGD2AQ9BW72 106 aa6.21□□□□□ -1.42
HLA-DQB1-206ENST00000443574 KCNQ1DNQ9H478 68 aa6.21□□□□□ -1.42
HLA-DQB1-206ENST00000443574 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
HLA-DQB1-206ENST00000443574 CRYGAP11844 174 aa6.2□□□□□ -1.42
HLA-DQB1-206ENST00000443574 Q6ZVH6 145 aa6.2□□□□□ -1.42
HLA-DQB1-206ENST00000443574 LINC00308Q8TCZ7 52 aa6.2□□□□□ -1.42
HLA-DQB1-206ENST00000443574 LITAFQ99732 161 aa6.2□□□□□ -1.42
HLA-DQB1-206ENST00000443574 TTTY13Q9BZ97 58 aa6.2□□□□□ -1.42
HLA-DQB1-206ENST00000443574 TRAV23DV6A0A075B6W5 121 aa6.19□□□□□ -1.42
HLA-DQB1-206ENST00000443574 SCGB1D1O95968 90 aa6.19□□□□□ -1.42
HLA-DQB1-206ENST00000443574 SPRR1AP35321 89 aa6.19□□□□□ -1.42
HLA-DQB1-206ENST00000443574 FAM229BQ4G0N7 80 aa6.19□□□□□ -1.42
HLA-DQB1-206ENST00000443574 SOSTDC1Q6X4U4 206 aa6.19□□□□□ -1.42
HLA-DQB1-206ENST00000443574 LINC00518Q8N0U6 118 aa6.19□□□□□ -1.42
HLA-DQB1-206ENST00000443574 SPANXDQ9BXN6 97 aa6.19□□□□□ -1.42
HLA-DQB1-206ENST00000443574 C5orf52A6NGY3 159 aa6.18□□□□□ -1.42
HLA-DQB1-206ENST00000443574 IGLV6-57P01721 117 aa6.18□□□□□ -1.42
HLA-DQB1-206ENST00000443574 IFITM1P13164 125 aa6.18□□□□□ -1.42
HLA-DQB1-206ENST00000443574 HINT1P49773 126 aaPredicted RBP6.18□□□□□ -1.42
HLA-DQB1-206ENST00000443574 OR13C6PQ8NH95 151 aa6.18□□□□□ -1.42
HLA-DQB1-206ENST00000443574 JOSD1Q15040 202 aaPredicted RBP6.17□□□□□ -1.42
HLA-DQB1-206ENST00000443574 PCP2Q8IVA1 136 aa6.17□□□□□ -1.42
HLA-DQB1-206ENST00000443574 PPDPFQ9H3Y8 114 aa6.17□□□□□ -1.42
HLA-DQB1-206ENST00000443574 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
HLA-DQB1-206ENST00000443574 KRTAP4-16G5E9R7 235 aaPredicted RBP6.15□□□□□ -1.42
HLA-DQB1-206ENST00000443574 ZNF73O43830 326 aaPredicted RBP6.15□□□□□ -1.42
HLA-DQB1-206ENST00000443574 Q6ZRX8 168 aa6.15□□□□□ -1.42
HLA-DQB1-206ENST00000443574 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.43
HLA-DQB1-206ENST00000443574 A0A087X002 238 aa6.14□□□□□ -1.43
HLA-DQB1-206ENST00000443574 B5MCH6 92 aa6.14□□□□□ -1.43
HLA-DQB1-206ENST00000443574 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
HLA-DQB1-206ENST00000443574 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
HLA-DQB1-206ENST00000443574 A6NDN8 102 aa6.11□□□□□ -1.43
HLA-DQB1-206ENST00000443574 MUSTN1Q8IVN3 82 aa6.11□□□□□ -1.43
HLA-DQB1-206ENST00000443574 VAMP8Q9BV40 100 aa6.11□□□□□ -1.43
HLA-DQB1-206ENST00000443574 ANAPC11Q9NYG5 84 aa6.11□□□□□ -1.43
HLA-DQB1-206ENST00000443574 TRAV13-2A0A0B4J235 113 aa6.1□□□□□ -1.43
HLA-DQB1-206ENST00000443574 LCE3BQ5TA77 95 aa6.1□□□□□ -1.43
HLA-DQB1-206ENST00000443574 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
HLA-DQB1-206ENST00000443574 DHRS4-AS1Q9P1J3 65 aa6.1□□□□□ -1.43
HLA-DQB1-206ENST00000443574 COX8AP10176 69 aa6.09□□□□□ -1.43
HLA-DQB1-206ENST00000443574 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
HLA-DQB1-206ENST00000443574 Q9BRP9 147 aa6.09□□□□□ -1.43
HLA-DQB1-206ENST00000443574 DLEU1O43261 78 aa6.08□□□□□ -1.44
HLA-DQB1-206ENST00000443574 COX7BP24311 80 aa6.08□□□□□ -1.44
HLA-DQB1-206ENST00000443574 C6orf99Q4VX62 202 aa6.08□□□□□ -1.44
HLA-DQB1-206ENST00000443574 SPATA45Q537H7 98 aa6.08□□□□□ -1.44
HLA-DQB1-206ENST00000443574 GAGE2AQ6NT46 116 aa6.08□□□□□ -1.44
HLA-DQB1-206ENST00000443574 HIST1H4GQ99525 98 aa6.08□□□□□ -1.44
HLA-DQB1-206ENST00000443574 PAM16Q9Y3D7 125 aa6.08□□□□□ -1.44
HLA-DQB1-206ENST00000443574 TRBV7-6A0A0J9YX20 115 aa6.07□□□□□ -1.44
HLA-DQB1-206ENST00000443574 A0A1B0GWB2 263 aa6.07□□□□□ -1.44
HLA-DQB1-206ENST00000443574 ELOF1P60002 83 aaKnown RBP6.07□□□□□ -1.44
HLA-DQB1-206ENST00000443574 CTAG1AP78358 180 aa6.07□□□□□ -1.44
HLA-DQB1-206ENST00000443574 LINC00483Q53H64 154 aa6.07□□□□□ -1.44
HLA-DQB1-206ENST00000443574 SLC25A34Q6PIV7 304 aa6.07□□□□□ -1.44
HLA-DQB1-206ENST00000443574 TMA7Q9Y2S6 64 aaKnown RBP6.07□□□□□ -1.44
HLA-DQB1-206ENST00000443574 A4D1N5 150 aa6.06□□□□□ -1.44
HLA-DQB1-206ENST00000443574 TSPAN13O95857 204 aa6.06□□□□□ -1.44
HLA-DQB1-206ENST00000443574 SPAG11AQ6PDA7 123 aa6.06□□□□□ -1.44
HLA-DQB1-206ENST00000443574 C3orf22Q8N5N4 141 aa6.06□□□□□ -1.44
HLA-DQB1-206ENST00000443574 NHP2Q9NX24 153 aaKnown RBP6.06□□□□□ -1.44
HLA-DQB1-206ENST00000443574 ERC2-IT1O76042 136 aa6.05□□□□□ -1.44
HLA-DQB1-206ENST00000443574 IGLV9-49A0A0B4J1Y8 123 aa6.04□□□□□ -1.44
HLA-DQB1-206ENST00000443574 VAMP3Q15836 100 aa6.04□□□□□ -1.44
HLA-DQB1-206ENST00000443574 PRR4Q16378 134 aa6.04□□□□□ -1.44
HLA-DQB1-206ENST00000443574 C14orf144Q96I85 54 aa6.04□□□□□ -1.44
HLA-DQB1-206ENST00000443574 HIGD1BQ9P298 99 aa6.04□□□□□ -1.44
HLA-DQB1-206ENST00000443574 MOBPQ13875 183 aa6.03□□□□□ -1.44
HLA-DQB1-206ENST00000443574 C9orf153Q5TBE3 101 aa6.03□□□□□ -1.44
HLA-DQB1-206ENST00000443574 SLC25A20O43772 301 aa6.02□□□□□ -1.45
HLA-DQB1-206ENST00000443574 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
HLA-DQB1-206ENST00000443574 Q8NBF4 154 aa6.02□□□□□ -1.45
HLA-DQB1-206ENST00000443574 SMIM11BQ8TCY0 68 aa6.02□□□□□ -1.45
HLA-DQB1-206ENST00000443574 SSBP3-AS1Q7Z2R9 100 aa6.01□□□□□ -1.45
HLA-DQB1-206ENST00000443574 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
HLA-DQB1-206ENST00000443574 LAMTOR3Q9UHA4 124 aa6.01□□□□□ -1.45
HLA-DQB1-206ENST00000443574 SPINK1P00995 79 aa6□□□□□ -1.45
HLA-DQB1-206ENST00000443574 SPRR1BP22528 89 aa6□□□□□ -1.45
HLA-DQB1-206ENST00000443574 TAL2Q16559 108 aa6□□□□□ -1.45
HLA-DQB1-206ENST00000443574 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
HLA-DQB1-206ENST00000443574 RAB37Q96AX2 223 aa6□□□□□ -1.45
HLA-DQB1-206ENST00000443574 C12orf57Q99622 126 aa6□□□□□ -1.45
HLA-DQB1-206ENST00000443574 PYY3Q5JQD4 70 aa5.99□□□□□ -1.45
HLA-DQB1-206ENST00000443574 TEX49A0A1B0GTD5 131 aa5.98□□□□□ -1.45
HLA-DQB1-206ENST00000443574 C2orf91Q6ZV80 131 aa5.98□□□□□ -1.45
HLA-DQB1-206ENST00000443574 LRP2P98164 4655 aa5.98□□□□□ -1.45
HLA-DQB1-206ENST00000443574 A0A0B4J2C4 111 aa5.97□□□□□ -1.45
HLA-DQB1-206ENST00000443574 SNCGO76070 127 aa5.97□□□□□ -1.45
HLA-DQB1-206ENST00000443574 RPS29P62273 56 aaKnown RBP5.97□□□□□ -1.45
HLA-DQB1-206ENST00000443574 DEFB105AQ8NG35 78 aa5.97□□□□□ -1.45
HLA-DQB1-206ENST00000443574 CDIP1Q9H305 208 aa5.97□□□□□ -1.45
HLA-DQB1-206ENST00000443574 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms