RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 CD164Q04900 197 aa4.48□□□□□ -1.69
USP46-201ENST00000441222 ZNF861PO60384 105 aa4.48□□□□□ -1.69
USP46-201ENST00000441222 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
USP46-201ENST00000441222 A8MUN3 132 aa4.47□□□□□ -1.69
USP46-201ENST00000441222 IGLV1-50A0A075B6I6 118 aa4.47□□□□□ -1.69
USP46-201ENST00000441222 CDC42SE1Q9NRR8 79 aa4.47□□□□□ -1.69
USP46-201ENST00000441222 PLA2G2DQ9UNK4 145 aa4.47□□□□□ -1.69
USP46-201ENST00000441222 SPANXA2-OT1Q8N9U9 137 aa4.47□□□□□ -1.69
USP46-201ENST00000441222 EPG5Q9HCE0 2579 aa4.46□□□□□ -1.7
USP46-201ENST00000441222 LINC00528Q8N1L1 170 aa4.46□□□□□ -1.7
USP46-201ENST00000441222 KTN1-AS1Q86SY8 53 aa4.46□□□□□ -1.7
USP46-201ENST00000441222 C9orf129Q5T035 196 aaKnown RBP4.46□□□□□ -1.7
USP46-201ENST00000441222 LCA10Q71F78 164 aa4.45□□□□□ -1.7
USP46-201ENST00000441222 IGFL1Q6UW32 110 aa4.45□□□□□ -1.7
USP46-201ENST00000441222 KLK9Q2XQG4 91 aa4.45□□□□□ -1.7
USP46-201ENST00000441222 AKAP13Q12802 2813 aa4.44□□□□□ -1.7
USP46-201ENST00000441222 TLX1NBP0CAT3 122 aa4.44□□□□□ -1.7
USP46-201ENST00000441222 SRCAPQ6ZRS2 3230 aa4.44□□□□□ -1.7
USP46-201ENST00000441222 IGLV5-37A0A075B6J1 123 aa4.44□□□□□ -1.7
USP46-201ENST00000441222 LITAFQ99732 161 aa4.43□□□□□ -1.7
USP46-201ENST00000441222 OBSCN-AS1Q96MR7 158 aa4.43□□□□□ -1.7
USP46-201ENST00000441222 MGAM2Q2M2H8 2515 aa4.43□□□□□ -1.7
USP46-201ENST00000441222 FAM168BA1KXE4 195 aa4.43□□□□□ -1.7
USP46-201ENST00000441222 DSCR10P59022 87 aa4.43□□□□□ -1.7
USP46-201ENST00000441222 HECTD1Q9ULT8 2610 aa4.42□□□□□ -1.7
USP46-201ENST00000441222 PRR34Q9NV39 138 aa4.42□□□□□ -1.7
USP46-201ENST00000441222 KRTAP24-1Q3LI83 254 aa4.42□□□□□ -1.7
USP46-201ENST00000441222 LINC01554Q52M75 96 aa4.42□□□□□ -1.7
USP46-201ENST00000441222 Q8N377 158 aa4.42□□□□□ -1.7
USP46-201ENST00000441222 MAST4O15021 2626 aa4.41□□□□□ -1.7
USP46-201ENST00000441222 LINC00336Q6ZUF6 198 aa4.41□□□□□ -1.7
USP46-201ENST00000441222 FAM104AQ969W3 186 aa4.41□□□□□ -1.7
USP46-201ENST00000441222 C15orf56Q8N910 161 aa4.41□□□□□ -1.7
USP46-201ENST00000441222 CSNK1G2-AS1Q8NCQ2 148 aa4.4□□□□□ -1.71
USP46-201ENST00000441222 C9orf163Q8N9P6 203 aa4.39□□□□□ -1.71
USP46-201ENST00000441222 H7BZZ5 65 aa4.39□□□□□ -1.71
USP46-201ENST00000441222 LINC00483Q53H64 154 aa4.39□□□□□ -1.71
USP46-201ENST00000441222 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
USP46-201ENST00000441222 A0A087WTM6 91 aa4.38□□□□□ -1.71
USP46-201ENST00000441222 C9orf92A6NGG3 77 aa4.37□□□□□ -1.71
USP46-201ENST00000441222 CFAP46Q8IYW2 2715 aa4.37□□□□□ -1.71
USP46-201ENST00000441222 ATRQ13535 2644 aa4.36□□□□□ -1.71
USP46-201ENST00000441222 Q1T7F1 81 aa4.36□□□□□ -1.71
USP46-201ENST00000441222 CNBPP62633 177 aaKnown RBP4.35□□□□□ -1.71
USP46-201ENST00000441222 C19orf73Q9NVV2 129 aa4.35□□□□□ -1.71
USP46-201ENST00000441222 SPRR4Q96PI1 79 aa4.35□□□□□ -1.71
USP46-201ENST00000441222 STAB1Q9NY15 2570 aa4.35□□□□□ -1.71
USP46-201ENST00000441222 IGLV5-48A0A075B6I7 105 aa4.34□□□□□ -1.71
USP46-201ENST00000441222 EP400Q96L91 3159 aa4.34□□□□□ -1.72
USP46-201ENST00000441222 A0A0D9SG42 100 aa4.34□□□□□ -1.72
USP46-201ENST00000441222 PSORS1C2Q9UIG4 136 aa4.34□□□□□ -1.72
USP46-201ENST00000441222 FLNBO75369 2602 aaKnown RBP4.33□□□□□ -1.72
USP46-201ENST00000441222 K7EIL1 84 aa4.33□□□□□ -1.72
USP46-201ENST00000441222 LINC00612Q8N6U2 182 aa4.33□□□□□ -1.72
USP46-201ENST00000441222 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
USP46-201ENST00000441222 ZNF575Q86XF7 245 aa4.32□□□□□ -1.72
USP46-201ENST00000441222 HRES1P13985 223 aa4.31□□□□□ -1.72
USP46-201ENST00000441222 Q6ZSA8 131 aa4.31□□□□□ -1.72
USP46-201ENST00000441222 FLNAP21333 2647 aaKnown RBP4.31□□□□□ -1.72
USP46-201ENST00000441222 NBEAL1Q6ZS30 2694 aa4.31□□□□□ -1.72
USP46-201ENST00000441222 ITPR3Q14573 2671 aa4.3□□□□□ -1.72
USP46-201ENST00000441222 A0A1B0GU33 70 aa4.3□□□□□ -1.72
USP46-201ENST00000441222 Q8N1X5 172 aa4.29□□□□□ -1.72
USP46-201ENST00000441222 DMBT1Q9UGM3 2413 aaPredicted RBP4.29□□□□□ -1.72
USP46-201ENST00000441222 KRTAP10-11P60412 298 aa4.29□□□□□ -1.72
USP46-201ENST00000441222 IGLV7-46A0A075B6I9 117 aa4.28□□□□□ -1.72
USP46-201ENST00000441222 A0A1W2PNM2 257 aa4.28□□□□□ -1.72
USP46-201ENST00000441222 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
USP46-201ENST00000441222 A0A1W2PNN7 141 aa4.28□□□□□ -1.72
USP46-201ENST00000441222 SMR3BP02814 79 aaPredicted RBP4.28□□□□□ -1.72
USP46-201ENST00000441222 FAM229BQ4G0N7 80 aa4.28□□□□□ -1.72
USP46-201ENST00000441222 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
USP46-201ENST00000441222 A0A0A0MQY5 61 aa4.28□□□□□ -1.73
USP46-201ENST00000441222 CENPEQ02224 2701 aa4.27□□□□□ -1.73
USP46-201ENST00000441222 Q75L30 129 aa4.27□□□□□ -1.73
USP46-201ENST00000441222 HELZ2Q9BYK8 2649 aaKnown RBP4.27□□□□□ -1.73
USP46-201ENST00000441222 EIF4EBP3O60516 100 aaPredicted RBP4.26□□□□□ -1.73
USP46-201ENST00000441222 GIG44P09565 113 aaPredicted RBP4.26□□□□□ -1.73
USP46-201ENST00000441222 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
USP46-201ENST00000441222 CSAG1Q6PB30 78 aa4.24□□□□□ -1.73
USP46-201ENST00000441222 CHD6Q8TD26 2715 aa4.24□□□□□ -1.73
USP46-201ENST00000441222 WIPF1O43516 503 aa4.24□□□□□ -1.73
USP46-201ENST00000441222 TNP2Q05952 138 aa4.24□□□□□ -1.73
USP46-201ENST00000441222 M0R2T5 61 aa4.24□□□□□ -1.73
USP46-201ENST00000441222 PRR26Q8N8Z3 221 aa4.23□□□□□ -1.73
USP46-201ENST00000441222 A0A0G2JQZ4 141 aa4.23□□□□□ -1.73
USP46-201ENST00000441222 KMT2BQ9UMN6 2715 aaPredicted RBP4.22□□□□□ -1.73
USP46-201ENST00000441222 CEP350Q5VT06 3117 aa4.22□□□□□ -1.73
USP46-201ENST00000441222 S4R3F8 94 aa4.21□□□□□ -1.73
USP46-201ENST00000441222 TEX15Q9BXT5 2789 aa4.21□□□□□ -1.74
USP46-201ENST00000441222 UNC79Q9P2D8 2635 aa4.21□□□□□ -1.74
USP46-201ENST00000441222 LINC01558Q9Y6Z2 57 aa4.2□□□□□ -1.74
USP46-201ENST00000441222 A0A096LNT2 108 aa4.2□□□□□ -1.74
USP46-201ENST00000441222 ZCCHC13Q8WW36 166 aaKnown RBP4.2□□□□□ -1.74
USP46-201ENST00000441222 R4GN34 69 aa4.18□□□□□ -1.74
USP46-201ENST00000441222 SEC61BP60468 96 aaKnown RBP4.17□□□□□ -1.74
USP46-201ENST00000441222 KRTAP10-3P60369 221 aa4.16□□□□□ -1.74
USP46-201ENST00000441222 Q8N9P0 234 aaPredicted RBP4.16□□□□□ -1.74
USP46-201ENST00000441222 CASC10Q5T4H9 136 aa4.16□□□□□ -1.74
USP46-201ENST00000441222 DNAH12Q6ZR08 3092 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms