RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 FAM218AQ96MZ4 157 aa4.03□□□□□ -1.76
PTPRR-204ENST00000440835 COX7A2LO14548 114 aa4.03□□□□□ -1.76
PTPRR-204ENST00000440835 KRTAP10-1P60331 282 aa4.03□□□□□ -1.76
PTPRR-204ENST00000440835 IGLV5-52A0A0A0MRZ9 124 aa4.02□□□□□ -1.77
PTPRR-204ENST00000440835 TRBV6-4A0A1B0GX49 114 aa4.02□□□□□ -1.77
PTPRR-204ENST00000440835 KRTAP29-1A8MX34 341 aaPredicted RBP4.02□□□□□ -1.77
PTPRR-204ENST00000440835 UBE2L6O14933 153 aa4.02□□□□□ -1.77
PTPRR-204ENST00000440835 NDUFA12Q9UI09 145 aa4.02□□□□□ -1.77
PTPRR-204ENST00000440835 PSCAO43653 123 aa4.02□□□□□ -1.77
PTPRR-204ENST00000440835 CIRBPQ14011 172 aaKnown RBP4.02□□□□□ -1.77
PTPRR-204ENST00000440835 FAM104AQ969W3 186 aa4.02□□□□□ -1.77
PTPRR-204ENST00000440835 LINC00846Q9NV44 126 aa4.02□□□□□ -1.77
PTPRR-204ENST00000440835 IGLV4-3A0A075B6K6 122 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 IGHV3-38A0A0C4DH36 116 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 LELP1Q5T871 98 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 Q6JHZ5 121 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
PTPRR-204ENST00000440835 RMI2Q96E14 147 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 PRYO14603 147 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 Q8N814 137 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 C20orf203Q8NBC4 194 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 Q9HAA7 133 aa4.01□□□□□ -1.77
PTPRR-204ENST00000440835 UBE2D4Q9Y2X8 147 aa4□□□□□ -1.77
PTPRR-204ENST00000440835 RNASE13Q5GAN3 156 aaKnown RBP4□□□□□ -1.77
PTPRR-204ENST00000440835 Q6ZSA8 131 aa4□□□□□ -1.77
PTPRR-204ENST00000440835 WFDC10BQ8IUB3 73 aa4□□□□□ -1.77
PTPRR-204ENST00000440835 TMEM243Q9BU79 118 aa4□□□□□ -1.77
PTPRR-204ENST00000440835 C14orf132Q9NPU4 83 aa4□□□□□ -1.77
PTPRR-204ENST00000440835 DMBT1Q9UGM3 2413 aaPredicted RBP4□□□□□ -1.77
PTPRR-204ENST00000440835 CHCHD7Q9BUK0 85 aa3.99□□□□□ -1.77
PTPRR-204ENST00000440835 RPL28P46779 137 aaKnown RBP3.99□□□□□ -1.77
PTPRR-204ENST00000440835 SOSTDC1Q6X4U4 206 aa3.99□□□□□ -1.77
PTPRR-204ENST00000440835 C20orf197Q8N268 126 aa3.99□□□□□ -1.77
PTPRR-204ENST00000440835 H7BZZ5 65 aa3.99□□□□□ -1.77
PTPRR-204ENST00000440835 DNAL4O96015 105 aa3.99□□□□□ -1.77
PTPRR-204ENST00000440835 LINC00308Q8TCZ7 52 aa3.99□□□□□ -1.77
PTPRR-204ENST00000440835 XCL1P47992 114 aa3.98□□□□□ -1.77
PTPRR-204ENST00000440835 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
PTPRR-204ENST00000440835 LINC00474Q9P2X8 69 aa3.98□□□□□ -1.77
PTPRR-204ENST00000440835 TRAV23DV6A0A075B6W5 121 aa3.98□□□□□ -1.77
PTPRR-204ENST00000440835 TIMM17BO60830 172 aa3.98□□□□□ -1.77
PTPRR-204ENST00000440835 M0R378 163 aa3.97□□□□□ -1.77
PTPRR-204ENST00000440835 LINC00528Q8N1L1 170 aa3.97□□□□□ -1.77
PTPRR-204ENST00000440835 LCE2BO14633 110 aa3.97□□□□□ -1.77
PTPRR-204ENST00000440835 PHF5AQ7RTV0 110 aaKnown RBP3.97□□□□□ -1.77
PTPRR-204ENST00000440835 ZNF73O43830 326 aaPredicted RBP3.96□□□□□ -1.78
PTPRR-204ENST00000440835 ZNF625Q96I27 306 aaPredicted RBP3.96□□□□□ -1.78
PTPRR-204ENST00000440835 OBSCN-AS1Q96MR7 158 aa3.96□□□□□ -1.78
PTPRR-204ENST00000440835 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.78
PTPRR-204ENST00000440835 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.96□□□□□ -1.78
PTPRR-204ENST00000440835 A0A087WYN8 130 aa3.96□□□□□ -1.78
PTPRR-204ENST00000440835 IGKV2-29A2NJV5 120 aaPredicted RBP3.96□□□□□ -1.78
PTPRR-204ENST00000440835 LCA10Q71F78 164 aa3.96□□□□□ -1.78
PTPRR-204ENST00000440835 NCR3O14931 201 aa3.95□□□□□ -1.78
PTPRR-204ENST00000440835 NDUFA1O15239 70 aa3.95□□□□□ -1.78
PTPRR-204ENST00000440835 Q6ZVQ6 151 aa3.95□□□□□ -1.78
PTPRR-204ENST00000440835 SMR3BP02814 79 aaPredicted RBP3.95□□□□□ -1.78
PTPRR-204ENST00000440835 SS18Q15532 418 aa3.95□□□□□ -1.78
PTPRR-204ENST00000440835 CDKN2A-AS1Q9UH64 79 aa3.95□□□□□ -1.78
PTPRR-204ENST00000440835 TRBV6-8A0A0A6YYG3 113 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 H0Y9J4 135 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 Q75L30 129 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 LOC100131303A0A0U1RQF7 123 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 A8MUN3 132 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 NDUFC1O43677 76 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 TMEM256-PLSCR3K7ERE1 68 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 ENHOQ6UWT2 76 aa3.94□□□□□ -1.78
PTPRR-204ENST00000440835 COX6A2Q02221 97 aa3.93□□□□□ -1.78
PTPRR-204ENST00000440835 SNURFQ9Y675 71 aa3.93□□□□□ -1.78
PTPRR-204ENST00000440835 CCKP06307 115 aa3.93□□□□□ -1.78
PTPRR-204ENST00000440835 FAM229BQ4G0N7 80 aa3.93□□□□□ -1.78
PTPRR-204ENST00000440835 NTM-AS1Q6ZSK4 140 aa3.93□□□□□ -1.78
PTPRR-204ENST00000440835 IGHV3OR16-9A0A0B4J2B5 98 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 BCE1O60756 84 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 SLPIP03973 132 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 MP68P56378 58 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 UBE2BP63146 152 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 FAM19A3Q7Z5A8 133 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 LINC00337Q8N6G1 96 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 F8WEM9 126 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 FUSP35637 526 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPRR-204ENST00000440835 KLKP1Q107X0 134 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 CDC42SE2Q9NRR3 84 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 HERC1Q15751 4861 aa3.92□□□□□ -1.78
PTPRR-204ENST00000440835 IGKV2-28A0A075B6P5 120 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 IGLV5-45A0A087WSX0 123 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 A0A1B0GUV1 79 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 IGKV2D-28P01615 120 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 MIR7-3HGQ8N6C7 128 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 IGLV5-39A0A0G2JS06 123 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 RBM3P98179 157 aaKnown RBP3.91□□□□□ -1.78
PTPRR-204ENST00000440835 SCXQ7RTU7 201 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 SMIM11BQ8TCY0 68 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 PKHD1L1Q86WI1 4243 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 MYCBP2O75592 4640 aa3.91□□□□□ -1.78
PTPRR-204ENST00000440835 TRAV7A0A075B6U4 112 aa3.9□□□□□ -1.78
PTPRR-204ENST00000440835 LECT2O14960 151 aa3.9□□□□□ -1.78
PTPRR-204ENST00000440835 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.78
PTPRR-204ENST00000440835 CXCL6P80162 114 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms