RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 TENM2Q9NT68 2774 aa12.1□□□□□ -0.47
PTPRJ-202ENST00000440289 TRAV7A0A075B6U4 112 aa12.1□□□□□ -0.47
PTPRJ-202ENST00000440289 LOC110117498A0A087WWA1 95 aa12.09□□□□□ -0.47
PTPRJ-202ENST00000440289 A0A0G2JQZ4 141 aa12.08□□□□□ -0.48
PTPRJ-202ENST00000440289 A0A1W2PNN7 141 aa12.08□□□□□ -0.48
PTPRJ-202ENST00000440289 FAM168BA1KXE4 195 aa12.08□□□□□ -0.48
PTPRJ-202ENST00000440289 ELOF1P60002 83 aaKnown RBP12.08□□□□□ -0.48
PTPRJ-202ENST00000440289 H7BZZ5 65 aa12.07□□□□□ -0.48
PTPRJ-202ENST00000440289 M0R378 163 aa12.07□□□□□ -0.48
PTPRJ-202ENST00000440289 MRAPQ8TCY5 172 aa12.07□□□□□ -0.48
PTPRJ-202ENST00000440289 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
PTPRJ-202ENST00000440289 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
PTPRJ-202ENST00000440289 C15orf56Q8N910 161 aa12.06□□□□□ -0.48
PTPRJ-202ENST00000440289 MPLKIPQ8TAP9 179 aa12.05□□□□□ -0.48
PTPRJ-202ENST00000440289 RPS28P62857 69 aaKnown RBP12.04□□□□□ -0.48
PTPRJ-202ENST00000440289 SYCNQ0VAF6 134 aa12.04□□□□□ -0.48
PTPRJ-202ENST00000440289 DEFB131BA0A096LNP1 70 aa12.03□□□□□ -0.48
PTPRJ-202ENST00000440289 LRCOL1A6NCL2 159 aa12.03□□□□□ -0.48
PTPRJ-202ENST00000440289 FAM30AQ9NZY2 134 aa12.03□□□□□ -0.48
PTPRJ-202ENST00000440289 DEFB116Q30KQ4 102 aa12.03□□□□□ -0.48
PTPRJ-202ENST00000440289 ST20-AS1Q8NBB2 130 aa12.03□□□□□ -0.48
PTPRJ-202ENST00000440289 LINC00474Q9P2X8 69 aa12.02□□□□□ -0.48
PTPRJ-202ENST00000440289 EGFEM1PQ0D2K5 195 aa12.02□□□□□ -0.49
PTPRJ-202ENST00000440289 TRBV7-4A0A0J9YYF1 115 aa12.02□□□□□ -0.49
PTPRJ-202ENST00000440289 PDE6GP18545 87 aa12.01□□□□□ -0.49
PTPRJ-202ENST00000440289 CASC10Q5T4H9 136 aa12.01□□□□□ -0.49
PTPRJ-202ENST00000440289 LYSTQ99698 3801 aa12.01□□□□□ -0.49
PTPRJ-202ENST00000440289 UBE2BP63146 152 aa12□□□□□ -0.49
PTPRJ-202ENST00000440289 PRR4Q16378 134 aa12□□□□□ -0.49
PTPRJ-202ENST00000440289 Q5XG85 94 aa12□□□□□ -0.49
PTPRJ-202ENST00000440289 C7orf33Q8WU49 177 aa12□□□□□ -0.49
PTPRJ-202ENST00000440289 LINC00528Q8N1L1 170 aa11.99□□□□□ -0.49
PTPRJ-202ENST00000440289 STAB2Q8WWQ8 2551 aa11.99□□□□□ -0.49
PTPRJ-202ENST00000440289 CXCL6P80162 114 aa11.98□□□□□ -0.49
PTPRJ-202ENST00000440289 ETDCA0A1B0GVM5 59 aa11.98□□□□□ -0.49
PTPRJ-202ENST00000440289 IGKV2-24A0A0C4DH68 120 aa11.97□□□□□ -0.49
PTPRJ-202ENST00000440289 TMEM254Q8TBM7 123 aa11.97□□□□□ -0.49
PTPRJ-202ENST00000440289 HIGD2AQ9BW72 106 aa11.97□□□□□ -0.49
PTPRJ-202ENST00000440289 GVQW2A0A096LPI5 108 aaPredicted RBP11.96□□□□□ -0.49
PTPRJ-202ENST00000440289 KRTAP10-11P60412 298 aa11.96□□□□□ -0.5
PTPRJ-202ENST00000440289 C11orf45Q8TAV5 145 aa11.96□□□□□ -0.5
PTPRJ-202ENST00000440289 Q8N377 158 aa11.93□□□□□ -0.5
PTPRJ-202ENST00000440289 SRRM2Q9UQ35 2752 aaKnown RBP11.92□□□□□ -0.5
PTPRJ-202ENST00000440289 FUSP35637 526 aaKnown RBP eCLIP11.92□□□□□ -0.5
PTPRJ-202ENST00000440289 SMIM29Q86T20 159 aa11.92□□□□□ -0.5
PTPRJ-202ENST00000440289 SERP1Q9Y6X1 66 aa11.91□□□□□ -0.5
PTPRJ-202ENST00000440289 TRBV7-6A0A0J9YX20 115 aa11.9□□□□□ -0.5
PTPRJ-202ENST00000440289 IGKV4-1P06312 121 aa11.9□□□□□ -0.5
PTPRJ-202ENST00000440289 A0A096LNI7 61 aa11.9□□□□□ -0.5
PTPRJ-202ENST00000440289 KLKP1Q107X0 134 aa11.9□□□□□ -0.5
PTPRJ-202ENST00000440289 C1orf137Q5JT78 98 aa11.89□□□□□ -0.51
PTPRJ-202ENST00000440289 KRTAP26-1Q6PEX3 210 aa11.89□□□□□ -0.51
PTPRJ-202ENST00000440289 ERC2-IT1O76042 136 aa11.89□□□□□ -0.51
PTPRJ-202ENST00000440289 LINC00336Q6ZUF6 198 aa11.88□□□□□ -0.51
PTPRJ-202ENST00000440289 A0A0U1RQV1 116 aa11.87□□□□□ -0.51
PTPRJ-202ENST00000440289 PKIGQ9Y2B9 76 aa11.87□□□□□ -0.51
PTPRJ-202ENST00000440289 BRK1Q8WUW1 75 aa11.87□□□□□ -0.51
PTPRJ-202ENST00000440289 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.86□□□□□ -0.51
PTPRJ-202ENST00000440289 PRLHP81277 87 aa11.85□□□□□ -0.51
PTPRJ-202ENST00000440289 Q9BRP9 147 aa11.85□□□□□ -0.51
PTPRJ-202ENST00000440289 FAM229BQ4G0N7 80 aa11.84□□□□□ -0.51
PTPRJ-202ENST00000440289 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
PTPRJ-202ENST00000440289 WFDC13Q8IUB5 93 aa11.84□□□□□ -0.51
PTPRJ-202ENST00000440289 H3BQ85 93 aa11.83□□□□□ -0.51
PTPRJ-202ENST00000440289 A0A1W2PNM2 257 aa11.83□□□□□ -0.52
PTPRJ-202ENST00000440289 PRYO14603 147 aa11.83□□□□□ -0.52
PTPRJ-202ENST00000440289 COL7A1Q02388 2944 aa11.83□□□□□ -0.52
PTPRJ-202ENST00000440289 DNAH10Q8IVF4 4471 aa11.83□□□□□ -0.52
PTPRJ-202ENST00000440289 FP248Q71RG6 208 aaPredicted RBP11.82□□□□□ -0.52
PTPRJ-202ENST00000440289 LINC01556Q5JQF7 62 aa11.8□□□□□ -0.52
PTPRJ-202ENST00000440289 Q6ZRX8 168 aa11.8□□□□□ -0.52
PTPRJ-202ENST00000440289 K7EQZ3 153 aa11.79□□□□□ -0.52
PTPRJ-202ENST00000440289 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
PTPRJ-202ENST00000440289 LINC00588Q9Y4M8 146 aa11.78□□□□□ -0.52
PTPRJ-202ENST00000440289 SMIM26A0A096LP01 95 aa11.78□□□□□ -0.52
PTPRJ-202ENST00000440289 KRTAP24-1Q3LI83 254 aa11.76□□□□□ -0.53
PTPRJ-202ENST00000440289 MRPL55Q7Z7F7 128 aaKnown RBP11.76□□□□□ -0.53
PTPRJ-202ENST00000440289 PSCAO43653 123 aa11.76□□□□□ -0.53
PTPRJ-202ENST00000440289 RPL37AP61513 92 aaKnown RBP11.76□□□□□ -0.53
PTPRJ-202ENST00000440289 OCR1Q9BZK8 76 aa11.75□□□□□ -0.53
PTPRJ-202ENST00000440289 DHRS4-AS1Q9P1J3 65 aa11.74□□□□□ -0.53
PTPRJ-202ENST00000440289 A0A087WSZ3 146 aa11.73□□□□□ -0.53
PTPRJ-202ENST00000440289 IGLV1-50A0A075B6I6 118 aa11.73□□□□□ -0.53
PTPRJ-202ENST00000440289 EPM2AB3EWF7 344 aa11.73□□□□□ -0.53
PTPRJ-202ENST00000440289 NDUFC1O43677 76 aa11.72□□□□□ -0.53
PTPRJ-202ENST00000440289 BCE1O60756 84 aa11.71□□□□□ -0.54
PTPRJ-202ENST00000440289 CHTF8P0CG12 524 aa11.71□□□□□ -0.54
PTPRJ-202ENST00000440289 Q8NBF4 154 aa11.7□□□□□ -0.54
PTPRJ-202ENST00000440289 LINC00476Q8WZB0 136 aa11.7□□□□□ -0.54
PTPRJ-202ENST00000440289 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
PTPRJ-202ENST00000440289 REG3GQ6UW15 175 aa11.68□□□□□ -0.54
PTPRJ-202ENST00000440289 IGLV5-48A0A075B6I7 105 aa11.67□□□□□ -0.54
PTPRJ-202ENST00000440289 H3BNG1 76 aa11.67□□□□□ -0.54
PTPRJ-202ENST00000440289 DSCR10P59022 87 aa11.66□□□□□ -0.54
PTPRJ-202ENST00000440289 PSPHP1O15172 72 aa11.66□□□□□ -0.54
PTPRJ-202ENST00000440289 DNAH10OSP0CZ25 163 aa11.65□□□□□ -0.54
PTPRJ-202ENST00000440289 UBE2DNLQ8IWF7 75 aa11.64□□□□□ -0.55
PTPRJ-202ENST00000440289 UBE2AP49459 152 aa11.63□□□□□ -0.55
PTPRJ-202ENST00000440289 HUWE1Q7Z6Z7 4374 aaKnown RBP11.62□□□□□ -0.55
PTPRJ-202ENST00000440289 IGFL1Q6UW32 110 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms