RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ETDCA0A1B0GVM5 59 aa7.06□□□□□ -1.28
HSPG2-206ENST00000439717 TRAV23DV6A0A075B6W5 121 aa7.05□□□□□ -1.28
HSPG2-206ENST00000439717 JOSD1Q15040 202 aaPredicted RBP7.05□□□□□ -1.28
HSPG2-206ENST00000439717 MUSTN1Q8IVN3 82 aa7.04□□□□□ -1.28
HSPG2-206ENST00000439717 HIGD2AQ9BW72 106 aa7.04□□□□□ -1.28
HSPG2-206ENST00000439717 B5MCH6 92 aa7.03□□□□□ -1.28
HSPG2-206ENST00000439717 COX8AP10176 69 aa7.03□□□□□ -1.28
HSPG2-206ENST00000439717 CRYGAP11844 174 aa7.03□□□□□ -1.28
HSPG2-206ENST00000439717 FAM229BQ4G0N7 80 aa7.03□□□□□ -1.28
HSPG2-206ENST00000439717 OR13C6PQ8NH95 151 aa7.03□□□□□ -1.28
HSPG2-206ENST00000439717 DLEU1O43261 78 aa7.02□□□□□ -1.29
HSPG2-206ENST00000439717 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
HSPG2-206ENST00000439717 ZNF706Q9Y5V0 76 aaPredicted RBP7.02□□□□□ -1.29
HSPG2-206ENST00000439717 HINT1P49773 126 aaPredicted RBP7.01□□□□□ -1.29
HSPG2-206ENST00000439717 Q6ZRX8 168 aa7.01□□□□□ -1.29
HSPG2-206ENST00000439717 SMCR5Q8TEV8 140 aa7.01□□□□□ -1.29
HSPG2-206ENST00000439717 VAMP8Q9BV40 100 aa7.01□□□□□ -1.29
HSPG2-206ENST00000439717 TMA7Q9Y2S6 64 aaKnown RBP7.01□□□□□ -1.29
HSPG2-206ENST00000439717 A0A087X002 238 aa7□□□□□ -1.29
HSPG2-206ENST00000439717 SPATA45Q537H7 98 aa7□□□□□ -1.29
HSPG2-206ENST00000439717 SPRR4Q96PI1 79 aa7□□□□□ -1.29
HSPG2-206ENST00000439717 PAM16Q9Y3D7 125 aa7□□□□□ -1.29
HSPG2-206ENST00000439717 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
HSPG2-206ENST00000439717 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
HSPG2-206ENST00000439717 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
HSPG2-206ENST00000439717 Q9BRP9 147 aa6.98□□□□□ -1.29
HSPG2-206ENST00000439717 A6NDN8 102 aa6.97□□□□□ -1.29
HSPG2-206ENST00000439717 KRTAP13-2Q52LG2 175 aa6.97□□□□□ -1.29
HSPG2-206ENST00000439717 C14orf144Q96I85 54 aa6.97□□□□□ -1.29
HSPG2-206ENST00000439717 TRBV7-6A0A0J9YX20 115 aa6.96□□□□□ -1.3
HSPG2-206ENST00000439717 PYY3Q5JQD4 70 aa6.96□□□□□ -1.3
HSPG2-206ENST00000439717 SLC25A34Q6PIV7 304 aa6.96□□□□□ -1.3
HSPG2-206ENST00000439717 HIST1H4GQ99525 98 aa6.96□□□□□ -1.3
HSPG2-206ENST00000439717 HIGD1BQ9P298 99 aa6.96□□□□□ -1.3
HSPG2-206ENST00000439717 A4D1N5 150 aa6.95□□□□□ -1.3
HSPG2-206ENST00000439717 ERC2-IT1O76042 136 aa6.95□□□□□ -1.3
HSPG2-206ENST00000439717 COX7BP24311 80 aa6.95□□□□□ -1.3
HSPG2-206ENST00000439717 C6orf99Q4VX62 202 aa6.95□□□□□ -1.3
HSPG2-206ENST00000439717 LINC00483Q53H64 154 aa6.95□□□□□ -1.3
HSPG2-206ENST00000439717 DHRS4-AS1Q9P1J3 65 aa6.95□□□□□ -1.3
HSPG2-206ENST00000439717 ELOF1P60002 83 aaKnown RBP6.94□□□□□ -1.3
HSPG2-206ENST00000439717 A0A1B0GWB2 263 aa6.92□□□□□ -1.3
HSPG2-206ENST00000439717 GAGE2AQ6NT46 116 aa6.92□□□□□ -1.3
HSPG2-206ENST00000439717 HMCN2Q8NDA2 5059 aa6.91□□□□□ -1.3
HSPG2-206ENST00000439717 CTAG1AP78358 180 aa6.91□□□□□ -1.3
HSPG2-206ENST00000439717 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
HSPG2-206ENST00000439717 C3orf22Q8N5N4 141 aa6.91□□□□□ -1.3
HSPG2-206ENST00000439717 LINC00304Q8N9R0 145 aa6.91□□□□□ -1.3
HSPG2-206ENST00000439717 SMIM11BQ8TCY0 68 aa6.91□□□□□ -1.3
HSPG2-206ENST00000439717 TAL2Q16559 108 aa6.9□□□□□ -1.3
HSPG2-206ENST00000439717 VAMP3Q15836 100 aa6.88□□□□□ -1.31
HSPG2-206ENST00000439717 SPAG11AQ6PDA7 123 aa6.88□□□□□ -1.31
HSPG2-206ENST00000439717 ST20-AS1Q8NBB2 130 aa6.88□□□□□ -1.31
HSPG2-206ENST00000439717 C12orf57Q99622 126 aa6.88□□□□□ -1.31
HSPG2-206ENST00000439717 NHP2Q9NX24 153 aaKnown RBP6.88□□□□□ -1.31
HSPG2-206ENST00000439717 TSPAN13O95857 204 aa6.87□□□□□ -1.31
HSPG2-206ENST00000439717 SPRR1BP22528 89 aa6.87□□□□□ -1.31
HSPG2-206ENST00000439717 SSBP3-AS1Q7Z2R9 100 aa6.87□□□□□ -1.31
HSPG2-206ENST00000439717 CEND1Q8N111 149 aa6.87□□□□□ -1.31
HSPG2-206ENST00000439717 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
HSPG2-206ENST00000439717 A6NJY4 79 aa6.86□□□□□ -1.31
HSPG2-206ENST00000439717 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
HSPG2-206ENST00000439717 CFC1P0CG37 223 aa6.86□□□□□ -1.31
HSPG2-206ENST00000439717 IGLV9-49A0A0B4J1Y8 123 aa6.85□□□□□ -1.31
HSPG2-206ENST00000439717 A0A0B4J2C4 111 aa6.85□□□□□ -1.31
HSPG2-206ENST00000439717 SLC25A20O43772 301 aa6.85□□□□□ -1.31
HSPG2-206ENST00000439717 C4orf48Q5BLP8 95 aa6.85□□□□□ -1.31
HSPG2-206ENST00000439717 Q8NBF4 154 aa6.85□□□□□ -1.31
HSPG2-206ENST00000439717 RAB37Q96AX2 223 aa6.85□□□□□ -1.31
HSPG2-206ENST00000439717 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
HSPG2-206ENST00000439717 MOBPQ13875 183 aa6.84□□□□□ -1.31
HSPG2-206ENST00000439717 TEX49A0A1B0GTD5 131 aa6.83□□□□□ -1.32
HSPG2-206ENST00000439717 HSD52Q0P140 79 aa6.83□□□□□ -1.32
HSPG2-206ENST00000439717 BVES-AS1Q5T3Y7 98 aa6.83□□□□□ -1.32
HSPG2-206ENST00000439717 LINC00575Q6W349 94 aa6.83□□□□□ -1.32
HSPG2-206ENST00000439717 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
HSPG2-206ENST00000439717 IGLV5-48A0A075B6I7 105 aa6.82□□□□□ -1.32
HSPG2-206ENST00000439717 C9orf153Q5TBE3 101 aa6.82□□□□□ -1.32
HSPG2-206ENST00000439717 DEFB105AQ8NG35 78 aa6.82□□□□□ -1.32
HSPG2-206ENST00000439717 SPINK1P00995 79 aa6.81□□□□□ -1.32
HSPG2-206ENST00000439717 FXYD2P54710 66 aa6.81□□□□□ -1.32
HSPG2-206ENST00000439717 PRR4Q16378 134 aa6.81□□□□□ -1.32
HSPG2-206ENST00000439717 hADV29S1A0JD25 119 aa6.8□□□□□ -1.32
HSPG2-206ENST00000439717 H7C2G1 150 aa6.8□□□□□ -1.32
HSPG2-206ENST00000439717 SMIM6P0DI80 62 aa6.8□□□□□ -1.32
HSPG2-206ENST00000439717 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
HSPG2-206ENST00000439717 PRO1854Q9UHT4 67 aa6.8□□□□□ -1.32
HSPG2-206ENST00000439717 RPS29P62273 56 aaKnown RBP6.79□□□□□ -1.32
HSPG2-206ENST00000439717 H0YGX0 51 aa6.78□□□□□ -1.32
HSPG2-206ENST00000439717 SMIM29Q86T20 159 aa6.78□□□□□ -1.32
HSPG2-206ENST00000439717 Q1RN00 199 aa6.77□□□□□ -1.33
HSPG2-206ENST00000439717 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.77□□□□□ -1.33
HSPG2-206ENST00000439717 Q8N377 158 aa6.77□□□□□ -1.33
HSPG2-206ENST00000439717 SNCGO76070 127 aa6.76□□□□□ -1.33
HSPG2-206ENST00000439717 Q6ZQY7 126 aa6.76□□□□□ -1.33
HSPG2-206ENST00000439717 PPDPFLQ8WWR9 84 aa6.75□□□□□ -1.33
HSPG2-206ENST00000439717 PRO1933Q9H354 126 aa6.75□□□□□ -1.33
HSPG2-206ENST00000439717 RETNLBQ9BQ08 111 aa6.74□□□□□ -1.33
HSPG2-206ENST00000439717 LOC105371267A0A1B0GV96 52 aa6.73□□□□□ -1.33
HSPG2-206ENST00000439717 A0A1B0GX51 115 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms