RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 KRTAP4-16G5E9R7 235 aaPredicted RBP11.64□□□□□ -0.55
SEMA3B-206ENST00000439487 OR13C6PQ8NH95 151 aa11.64□□□□□ -0.55
SEMA3B-206ENST00000439487 HIGD2AQ9BW72 106 aa11.64□□□□□ -0.55
SEMA3B-206ENST00000439487 COPS9Q8WXC6 57 aa11.63□□□□□ -0.55
SEMA3B-206ENST00000439487 TRAV23DV6A0A075B6W5 121 aa11.62□□□□□ -0.55
SEMA3B-206ENST00000439487 COX8AP10176 69 aa11.62□□□□□ -0.55
SEMA3B-206ENST00000439487 PAM16Q9Y3D7 125 aa11.62□□□□□ -0.55
SEMA3B-206ENST00000439487 SPATA45Q537H7 98 aa11.61□□□□□ -0.55
SEMA3B-206ENST00000439487 LINC00518Q8N0U6 118 aa11.61□□□□□ -0.55
SEMA3B-206ENST00000439487 PPDPFQ9H3Y8 114 aa11.61□□□□□ -0.55
SEMA3B-206ENST00000439487 B5MCH6 92 aa11.6□□□□□ -0.55
SEMA3B-206ENST00000439487 VAMP8Q9BV40 100 aa11.6□□□□□ -0.55
SEMA3B-206ENST00000439487 ANAPC11Q9NYG5 84 aa11.6□□□□□ -0.55
SEMA3B-206ENST00000439487 C14orf144Q96I85 54 aa11.59□□□□□ -0.55
SEMA3B-206ENST00000439487 ZNF73O43830 326 aaPredicted RBP11.57□□□□□ -0.56
SEMA3B-206ENST00000439487 PYY3Q5JQD4 70 aa11.57□□□□□ -0.56
SEMA3B-206ENST00000439487 SMCR5Q8TEV8 140 aa11.57□□□□□ -0.56
SEMA3B-206ENST00000439487 A0A087X002 238 aa11.56□□□□□ -0.56
SEMA3B-206ENST00000439487 DLEU1O43261 78 aa11.56□□□□□ -0.56
SEMA3B-206ENST00000439487 CBY1Q9Y3M2 126 aa11.56□□□□□ -0.56
SEMA3B-206ENST00000439487 CRYGAP11844 174 aa11.54□□□□□ -0.56
SEMA3B-206ENST00000439487 RPL13AP40429 203 aaKnown RBP11.54□□□□□ -0.56
SEMA3B-206ENST00000439487 Q6ZRX8 168 aa11.54□□□□□ -0.56
SEMA3B-206ENST00000439487 Q9BRP9 147 aa11.53□□□□□ -0.56
SEMA3B-206ENST00000439487 A6NDN8 102 aa11.52□□□□□ -0.57
SEMA3B-206ENST00000439487 ERC2-IT1O76042 136 aa11.52□□□□□ -0.57
SEMA3B-206ENST00000439487 SPRR4Q96PI1 79 aa11.52□□□□□ -0.57
SEMA3B-206ENST00000439487 HINT1P49773 126 aaPredicted RBP11.51□□□□□ -0.57
SEMA3B-206ENST00000439487 FAM229BQ4G0N7 80 aa11.51□□□□□ -0.57
SEMA3B-206ENST00000439487 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
SEMA3B-206ENST00000439487 HIST1H4GQ99525 98 aa11.51□□□□□ -0.57
SEMA3B-206ENST00000439487 A4D1N5 150 aa11.5□□□□□ -0.57
SEMA3B-206ENST00000439487 KRTAP13-2Q52LG2 175 aa11.5□□□□□ -0.57
SEMA3B-206ENST00000439487 ZNF706Q9Y5V0 76 aaPredicted RBP11.5□□□□□ -0.57
SEMA3B-206ENST00000439487 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
SEMA3B-206ENST00000439487 C6orf99Q4VX62 202 aa11.48□□□□□ -0.57
SEMA3B-206ENST00000439487 TYMSOSQ8TAI1 123 aa11.48□□□□□ -0.57
SEMA3B-206ENST00000439487 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
SEMA3B-206ENST00000439487 HIGD1BQ9P298 99 aa11.47□□□□□ -0.57
SEMA3B-206ENST00000439487 COX7BP24311 80 aa11.45□□□□□ -0.58
SEMA3B-206ENST00000439487 GAGE2AQ6NT46 116 aa11.44□□□□□ -0.58
SEMA3B-206ENST00000439487 C12orf57Q99622 126 aa11.44□□□□□ -0.58
SEMA3B-206ENST00000439487 ELOF1P60002 83 aaKnown RBP11.43□□□□□ -0.58
SEMA3B-206ENST00000439487 C3orf22Q8N5N4 141 aa11.43□□□□□ -0.58
SEMA3B-206ENST00000439487 SMIM11BQ8TCY0 68 aa11.43□□□□□ -0.58
SEMA3B-206ENST00000439487 LINC00483Q53H64 154 aa11.41□□□□□ -0.58
SEMA3B-206ENST00000439487 ST20-AS1Q8NBB2 130 aa11.41□□□□□ -0.58
SEMA3B-206ENST00000439487 TRBV7-6A0A0J9YX20 115 aa11.4□□□□□ -0.58
SEMA3B-206ENST00000439487 DHRS4-AS1Q9P1J3 65 aa11.4□□□□□ -0.58
SEMA3B-206ENST00000439487 A0A1B0GWB2 263 aa11.38□□□□□ -0.59
SEMA3B-206ENST00000439487 TAL2Q16559 108 aa11.37□□□□□ -0.59
SEMA3B-206ENST00000439487 TSPAN13O95857 204 aa11.36□□□□□ -0.59
SEMA3B-206ENST00000439487 CFC1BP0CG36 223 aa11.36□□□□□ -0.59
SEMA3B-206ENST00000439487 CFC1P0CG37 223 aa11.36□□□□□ -0.59
SEMA3B-206ENST00000439487 CEND1Q8N111 149 aa11.36□□□□□ -0.59
SEMA3B-206ENST00000439487 RNF213Q63HN8 5207 aa11.35□□□□□ -0.59
SEMA3B-206ENST00000439487 LINC00304Q8N9R0 145 aa11.34□□□□□ -0.59
SEMA3B-206ENST00000439487 IGLV9-49A0A0B4J1Y8 123 aa11.33□□□□□ -0.6
SEMA3B-206ENST00000439487 RAB37Q96AX2 223 aa11.33□□□□□ -0.6
SEMA3B-206ENST00000439487 UQCR10Q9UDW1 63 aa11.33□□□□□ -0.6
SEMA3B-206ENST00000439487 H7C2G1 150 aa11.31□□□□□ -0.6
SEMA3B-206ENST00000439487 VAMP3Q15836 100 aa11.31□□□□□ -0.6
SEMA3B-206ENST00000439487 A0A0B4J2C4 111 aa11.3□□□□□ -0.6
SEMA3B-206ENST00000439487 FXYD2P54710 66 aa11.3□□□□□ -0.6
SEMA3B-206ENST00000439487 MOBPQ13875 183 aa11.3□□□□□ -0.6
SEMA3B-206ENST00000439487 SPRR1BP22528 89 aa11.29□□□□□ -0.6
SEMA3B-206ENST00000439487 HSD52Q0P140 79 aa11.29□□□□□ -0.6
SEMA3B-206ENST00000439487 Q8NBF4 154 aa11.29□□□□□ -0.6
SEMA3B-206ENST00000439487 DEFB105AQ8NG35 78 aa11.29□□□□□ -0.6
SEMA3B-206ENST00000439487 TMEM238LA0A1B0GVL6 79 aa11.27□□□□□ -0.61
SEMA3B-206ENST00000439487 A6NJY4 79 aa11.27□□□□□ -0.61
SEMA3B-206ENST00000439487 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
SEMA3B-206ENST00000439487 C9orf153Q5TBE3 101 aa11.26□□□□□ -0.61
SEMA3B-206ENST00000439487 LINC00575Q6W349 94 aa11.26□□□□□ -0.61
SEMA3B-206ENST00000439487 PRO1933Q9H354 126 aa11.26□□□□□ -0.61
SEMA3B-206ENST00000439487 SLC25A20O43772 301 aa11.25□□□□□ -0.61
SEMA3B-206ENST00000439487 SSBP3-AS1Q7Z2R9 100 aa11.25□□□□□ -0.61
SEMA3B-206ENST00000439487 LRP2P98164 4655 aa11.24□□□□□ -0.61
SEMA3B-206ENST00000439487 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
SEMA3B-206ENST00000439487 LINC01547P58512 204 aaPredicted RBP11.24□□□□□ -0.61
SEMA3B-206ENST00000439487 C4orf48Q5BLP8 95 aa11.24□□□□□ -0.61
SEMA3B-206ENST00000439487 SMIM6P0DI80 62 aa11.23□□□□□ -0.61
SEMA3B-206ENST00000439487 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
SEMA3B-206ENST00000439487 SPAG11AQ6PDA7 123 aa11.23□□□□□ -0.61
SEMA3B-206ENST00000439487 PRO1854Q9UHT4 67 aa11.23□□□□□ -0.61
SEMA3B-206ENST00000439487 LOC105371267A0A1B0GV96 52 aa11.22□□□□□ -0.61
SEMA3B-206ENST00000439487 hADV29S1A0JD25 119 aa11.22□□□□□ -0.61
SEMA3B-206ENST00000439487 Q1RN00 199 aa11.22□□□□□ -0.61
SEMA3B-206ENST00000439487 LAMTOR3Q9UHA4 124 aa11.22□□□□□ -0.61
SEMA3B-206ENST00000439487 IGLV5-48A0A075B6I7 105 aa11.21□□□□□ -0.61
SEMA3B-206ENST00000439487 PRR4Q16378 134 aa11.21□□□□□ -0.61
SEMA3B-206ENST00000439487 SMIM29Q86T20 159 aa11.19□□□□□ -0.62
SEMA3B-206ENST00000439487 LPAP08519 4548 aa11.19□□□□□ -0.62
SEMA3B-206ENST00000439487 K7ERJ3 54 aa11.18□□□□□ -0.62
SEMA3B-206ENST00000439487 CTAG1AP78358 180 aa11.18□□□□□ -0.62
SEMA3B-206ENST00000439487 Q6ZQY7 126 aa11.18□□□□□ -0.62
SEMA3B-206ENST00000439487 Q8N377 158 aa11.18□□□□□ -0.62
SEMA3B-206ENST00000439487 RETNLBQ9BQ08 111 aa11.18□□□□□ -0.62
SEMA3B-206ENST00000439487 H0YGX0 51 aa11.15□□□□□ -0.62
SEMA3B-206ENST00000439487 SPINK1P00995 79 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms