RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TRBV7-6A0A0J9YX20 115 aa5.78□□□□□ -1.48
HPS4-206ENST00000439453 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
HPS4-206ENST00000439453 MUC7Q8TAX7 377 aa5.78□□□□□ -1.48
HPS4-206ENST00000439453 CHCHD10Q8WYQ3 142 aaPredicted RBP5.78□□□□□ -1.48
HPS4-206ENST00000439453 TRBV7-4A0A0J9YYF1 115 aa5.77□□□□□ -1.49
HPS4-206ENST00000439453 H3BQ85 93 aa5.77□□□□□ -1.49
HPS4-206ENST00000439453 LINC00474Q9P2X8 69 aa5.77□□□□□ -1.49
HPS4-206ENST00000439453 IGLV6-57P01721 117 aa5.77□□□□□ -1.49
HPS4-206ENST00000439453 MIFP14174 115 aa5.77□□□□□ -1.49
HPS4-206ENST00000439453 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
HPS4-206ENST00000439453 C10orf25Q5T742 122 aa5.76□□□□□ -1.49
HPS4-206ENST00000439453 DEFB105AQ8NG35 78 aa5.76□□□□□ -1.49
HPS4-206ENST00000439453 NBEAL2Q6ZNJ1 2754 aa5.75□□□□□ -1.49
HPS4-206ENST00000439453 LRCOL1A6NCL2 159 aa5.75□□□□□ -1.49
HPS4-206ENST00000439453 UNQ6190/PRO20217Q6UXQ8 127 aa5.75□□□□□ -1.49
HPS4-206ENST00000439453 PLECQ15149 4684 aaKnown RBP5.75□□□□□ -1.49
HPS4-206ENST00000439453 IGHV4-30-4P0DP06 118 aa5.75□□□□□ -1.49
HPS4-206ENST00000439453 REG3AQ06141 175 aa5.75□□□□□ -1.49
HPS4-206ENST00000439453 B9D2Q9BPU9 175 aa5.75□□□□□ -1.49
HPS4-206ENST00000439453 KMT2CQ8NEZ4 4911 aaKnown RBP5.75□□□□□ -1.49
HPS4-206ENST00000439453 LINC00612Q8N6U2 182 aa5.75□□□□□ -1.49
HPS4-206ENST00000439453 SEC61GP60059 68 aa5.74□□□□□ -1.49
HPS4-206ENST00000439453 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
HPS4-206ENST00000439453 PRO0255Q9UI72 69 aa5.74□□□□□ -1.49
HPS4-206ENST00000439453 BPY2O14599 106 aa5.74□□□□□ -1.49
HPS4-206ENST00000439453 SPAG11BQ08648 103 aa5.73□□□□□ -1.49
HPS4-206ENST00000439453 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.73□□□□□ -1.49
HPS4-206ENST00000439453 DIRC1Q969H9 104 aa5.73□□□□□ -1.49
HPS4-206ENST00000439453 HIGD2BQ4VC39 106 aa5.73□□□□□ -1.49
HPS4-206ENST00000439453 ERC2-IT1O76042 136 aa5.72□□□□□ -1.49
HPS4-206ENST00000439453 A0A0J9YWU9 116 aa5.72□□□□□ -1.49
HPS4-206ENST00000439453 PRR4Q16378 134 aa5.72□□□□□ -1.49
HPS4-206ENST00000439453 SACSQ9NZJ4 4579 aa5.72□□□□□ -1.49
HPS4-206ENST00000439453 COX7BP24311 80 aa5.71□□□□□ -1.49
HPS4-206ENST00000439453 DNAH1Q9P2D7 4330 aa5.71□□□□□ -1.49
HPS4-206ENST00000439453 SPTSSBQ8NFR3 76 aa5.71□□□□□ -1.5
HPS4-206ENST00000439453 STAB2Q8WWQ8 2551 aa5.71□□□□□ -1.5
HPS4-206ENST00000439453 ZNF73O43830 326 aaPredicted RBP5.71□□□□□ -1.5
HPS4-206ENST00000439453 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
HPS4-206ENST00000439453 Q8N9L7 120 aa5.7□□□□□ -1.5
HPS4-206ENST00000439453 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 C3orf84H3BNL1 204 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 PRYO14603 147 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 ELOF1P60002 83 aaKnown RBP5.69□□□□□ -1.5
HPS4-206ENST00000439453 MRPL55Q7Z7F7 128 aaKnown RBP5.69□□□□□ -1.5
HPS4-206ENST00000439453 XAGE1AQ9HD64 81 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 RYR3Q15413 4870 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 RETNQ9HD89 108 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 X6R8D5 127 aa5.69□□□□□ -1.5
HPS4-206ENST00000439453 CELA1Q9UNI1 258 aa5.68□□□□□ -1.5
HPS4-206ENST00000439453 GVQW2A0A096LPI5 108 aaPredicted RBP5.68□□□□□ -1.5
HPS4-206ENST00000439453 NKAPP1Q8N9T2 125 aa5.67□□□□□ -1.5
HPS4-206ENST00000439453 C6orf48Q9UBA6 75 aa5.67□□□□□ -1.5
HPS4-206ENST00000439453 PSPHP1O15172 72 aa5.67□□□□□ -1.5
HPS4-206ENST00000439453 ALMS1Q8TCU4 4167 aa5.67□□□□□ -1.5
HPS4-206ENST00000439453 ESRGQ1W209 222 aa5.67□□□□□ -1.5
HPS4-206ENST00000439453 Q6ZTC4 211 aa5.66□□□□□ -1.5
HPS4-206ENST00000439453 RYR2Q92736 4967 aa5.66□□□□□ -1.5
HPS4-206ENST00000439453 CAMK2N2Q96S95 79 aa5.66□□□□□ -1.5
HPS4-206ENST00000439453 LYRM9A8MSI8 78 aa5.66□□□□□ -1.5
HPS4-206ENST00000439453 HIGD2AQ9BW72 106 aa5.66□□□□□ -1.5
HPS4-206ENST00000439453 MP68P56378 58 aa5.65□□□□□ -1.5
HPS4-206ENST00000439453 KLK12Q9UKR0 248 aa5.65□□□□□ -1.5
HPS4-206ENST00000439453 F8WDY8 70 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 PMAIP1Q13794 54 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 FAM30AQ9NZY2 134 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 DNAH6Q9C0G6 4158 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 DEFB4AO15263 64 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 VPREB1P12018 145 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 LINC00528Q8N1L1 170 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 KMT2AQ03164 3969 aa5.65□□□□□ -1.51
HPS4-206ENST00000439453 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
HPS4-206ENST00000439453 PRR34Q9NV39 138 aa5.64□□□□□ -1.51
HPS4-206ENST00000439453 M0R378 163 aa5.64□□□□□ -1.51
HPS4-206ENST00000439453 TENM2Q9NT68 2774 aa5.63□□□□□ -1.51
HPS4-206ENST00000439453 LELP1Q5T871 98 aa5.63□□□□□ -1.51
HPS4-206ENST00000439453 DEFB135Q30KP9 77 aa5.62□□□□□ -1.51
HPS4-206ENST00000439453 FRAS1Q86XX4 4008 aa5.62□□□□□ -1.51
HPS4-206ENST00000439453 APOC4P55056 127 aa5.61□□□□□ -1.51
HPS4-206ENST00000439453 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
HPS4-206ENST00000439453 SMIM29Q86T20 159 aa5.6□□□□□ -1.51
HPS4-206ENST00000439453 ETDCA0A1B0GVM5 59 aa5.6□□□□□ -1.51
HPS4-206ENST00000439453 hDV103S1A0JD37 113 aa5.6□□□□□ -1.51
HPS4-206ENST00000439453 Q8NAQ8 132 aa5.6□□□□□ -1.51
HPS4-206ENST00000439453 UBE2BP63146 152 aa5.59□□□□□ -1.51
HPS4-206ENST00000439453 WWC2-AS2Q96NR7 200 aa5.59□□□□□ -1.51
HPS4-206ENST00000439453 LCE6AA0A183 80 aa5.58□□□□□ -1.52
HPS4-206ENST00000439453 Q6ZRU5 148 aa5.58□□□□□ -1.52
HPS4-206ENST00000439453 A6NED7 52 aa5.58□□□□□ -1.52
HPS4-206ENST00000439453 Q8N377 158 aa5.58□□□□□ -1.52
HPS4-206ENST00000439453 IGKV2D-24A0A075B6R9 120 aa5.57□□□□□ -1.52
HPS4-206ENST00000439453 IGLV5-48A0A075B6I7 105 aa5.57□□□□□ -1.52
HPS4-206ENST00000439453 WFDC13Q8IUB5 93 aa5.57□□□□□ -1.52
HPS4-206ENST00000439453 WFDC10BQ8IUB3 73 aa5.56□□□□□ -1.52
HPS4-206ENST00000439453 C1orf64Q8NEQ6 169 aa5.56□□□□□ -1.52
HPS4-206ENST00000439453 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
HPS4-206ENST00000439453 Q1T7F1 81 aa5.56□□□□□ -1.52
HPS4-206ENST00000439453 Q6ZRP5 223 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms