RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 TMEM254Q8TBM7 123 aa9.01□□□□□ -0.97
PCNX3-202ENST00000439247 SMIM26A0A096LP01 95 aa9□□□□□ -0.97
PCNX3-202ENST00000439247 MPLKIPQ8TAP9 179 aa9□□□□□ -0.97
PCNX3-202ENST00000439247 PRO0628Q9UI54 55 aa9□□□□□ -0.97
PCNX3-202ENST00000439247 PDE6GP18545 87 aa8.99□□□□□ -0.97
PCNX3-202ENST00000439247 ELOF1P60002 83 aaKnown RBP8.99□□□□□ -0.97
PCNX3-202ENST00000439247 NOTCH1P46531 2555 aa8.99□□□□□ -0.97
PCNX3-202ENST00000439247 MRAPQ8TCY5 172 aa8.98□□□□□ -0.97
PCNX3-202ENST00000439247 V9GYY9 64 aa8.98□□□□□ -0.97
PCNX3-202ENST00000439247 IGKV4-1P06312 121 aa8.97□□□□□ -0.97
PCNX3-202ENST00000439247 DEFB105AQ8NG35 78 aa8.97□□□□□ -0.97
PCNX3-202ENST00000439247 MDFIQ99750 246 aa8.97□□□□□ -0.97
PCNX3-202ENST00000439247 NBEAL1Q6ZS30 2694 aa8.96□□□□□ -0.97
PCNX3-202ENST00000439247 VPREB1P12018 145 aa8.96□□□□□ -0.98
PCNX3-202ENST00000439247 A0A0U1RQV1 116 aa8.96□□□□□ -0.98
PCNX3-202ENST00000439247 LYRM9A8MSI8 78 aa8.96□□□□□ -0.98
PCNX3-202ENST00000439247 BRK1Q8WUW1 75 aa8.96□□□□□ -0.98
PCNX3-202ENST00000439247 HIGD2AQ9BW72 106 aa8.96□□□□□ -0.98
PCNX3-202ENST00000439247 RETNQ9HD89 108 aa8.95□□□□□ -0.98
PCNX3-202ENST00000439247 PRR34Q9NV39 138 aa8.95□□□□□ -0.98
PCNX3-202ENST00000439247 CAMK2N2Q96S95 79 aa8.94□□□□□ -0.98
PCNX3-202ENST00000439247 LELP1Q5T871 98 aa8.94□□□□□ -0.98
PCNX3-202ENST00000439247 Q6ZRU5 148 aa8.94□□□□□ -0.98
PCNX3-202ENST00000439247 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
PCNX3-202ENST00000439247 OCR1Q9BZK8 76 aa8.93□□□□□ -0.98
PCNX3-202ENST00000439247 MGAM2Q2M2H8 2515 aa8.93□□□□□ -0.98
PCNX3-202ENST00000439247 LRCOL1A6NCL2 159 aa8.92□□□□□ -0.98
PCNX3-202ENST00000439247 NDUFC1O43677 76 aa8.92□□□□□ -0.98
PCNX3-202ENST00000439247 DNHD1Q96M86 4753 aa8.92□□□□□ -0.98
PCNX3-202ENST00000439247 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
PCNX3-202ENST00000439247 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
PCNX3-202ENST00000439247 DNAH3Q8TD57 4116 aa8.91□□□□□ -0.98
PCNX3-202ENST00000439247 PRYO14603 147 aa8.91□□□□□ -0.98
PCNX3-202ENST00000439247 KRTAP10-11P60412 298 aa8.91□□□□□ -0.98
PCNX3-202ENST00000439247 WFDC10BQ8IUB3 73 aa8.91□□□□□ -0.98
PCNX3-202ENST00000439247 Q8NAQ8 132 aa8.9□□□□□ -0.98
PCNX3-202ENST00000439247 M0R378 163 aa8.89□□□□□ -0.99
PCNX3-202ENST00000439247 H3BQ85 93 aa8.88□□□□□ -0.99
PCNX3-202ENST00000439247 Q6ZRP5 223 aa8.88□□□□□ -0.99
PCNX3-202ENST00000439247 SMIM29Q86T20 159 aa8.88□□□□□ -0.99
PCNX3-202ENST00000439247 FUSP35637 526 aaKnown RBP eCLIP8.88□□□□□ -0.99
PCNX3-202ENST00000439247 Q6ZTC4 211 aa8.87□□□□□ -0.99
PCNX3-202ENST00000439247 Q8N377 158 aa8.86□□□□□ -0.99
PCNX3-202ENST00000439247 C15orf56Q8N910 161 aa8.86□□□□□ -0.99
PCNX3-202ENST00000439247 PRB2P02812 416 aaPredicted RBP8.85□□□□□ -0.99
PCNX3-202ENST00000439247 SPART-AS1P0CW21 52 aa8.85□□□□□ -0.99
PCNX3-202ENST00000439247 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -0.99
PCNX3-202ENST00000439247 SERTAD4-AS1Q5TG53 156 aa8.84□□□□□ -0.99
PCNX3-202ENST00000439247 KRTAP26-1Q6PEX3 210 aa8.84□□□□□ -0.99
PCNX3-202ENST00000439247 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
PCNX3-202ENST00000439247 ERC2-IT1O76042 136 aa8.83□□□□□ -1
PCNX3-202ENST00000439247 EGFEM1PQ0D2K5 195 aa8.83□□□□□ -1
PCNX3-202ENST00000439247 ESRGQ1W209 222 aa8.83□□□□□ -1
PCNX3-202ENST00000439247 KPRPQ5T749 579 aaPredicted RBP8.83□□□□□ -1
PCNX3-202ENST00000439247 A0A1W2PNM2 257 aa8.82□□□□□ -1
PCNX3-202ENST00000439247 PRR4Q16378 134 aa8.82□□□□□ -1
PCNX3-202ENST00000439247 ST20-AS1Q8NBB2 130 aa8.82□□□□□ -1
PCNX3-202ENST00000439247 TENM3Q9P273 2699 aa8.81□□□□□ -1
PCNX3-202ENST00000439247 A0A0G2JQZ4 141 aa8.81□□□□□ -1
PCNX3-202ENST00000439247 A0A1W2PNN7 141 aa8.81□□□□□ -1
PCNX3-202ENST00000439247 APOC4P55056 127 aa8.81□□□□□ -1
PCNX3-202ENST00000439247 C7orf33Q8WU49 177 aa8.8□□□□□ -1
PCNX3-202ENST00000439247 FAM168BA1KXE4 195 aa8.8□□□□□ -1
PCNX3-202ENST00000439247 IGKV2D-24A0A075B6R9 120 aa8.78□□□□□ -1
PCNX3-202ENST00000439247 NKAPP1Q8N9T2 125 aa8.78□□□□□ -1
PCNX3-202ENST00000439247 Q9BRP9 147 aa8.78□□□□□ -1
PCNX3-202ENST00000439247 IGLV5-48A0A075B6I7 105 aa8.76□□□□□ -1.01
PCNX3-202ENST00000439247 K7EQZ3 153 aa8.76□□□□□ -1.01
PCNX3-202ENST00000439247 DEFB116Q30KQ4 102 aa8.76□□□□□ -1.01
PCNX3-202ENST00000439247 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
PCNX3-202ENST00000439247 C1orf64Q8NEQ6 169 aa8.75□□□□□ -1.01
PCNX3-202ENST00000439247 KCNQ1DNQ9H478 68 aa8.75□□□□□ -1.01
PCNX3-202ENST00000439247 C1orf195Q5TG92 126 aa8.75□□□□□ -1.01
PCNX3-202ENST00000439247 hDV103S1A0JD37 113 aa8.74□□□□□ -1.01
PCNX3-202ENST00000439247 DSCR10P59022 87 aa8.74□□□□□ -1.01
PCNX3-202ENST00000439247 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
PCNX3-202ENST00000439247 PSPHP1O15172 72 aa8.73□□□□□ -1.01
PCNX3-202ENST00000439247 J3QL48 77 aa8.72□□□□□ -1.01
PCNX3-202ENST00000439247 Q6ZRX8 168 aa8.71□□□□□ -1.01
PCNX3-202ENST00000439247 COL7A1Q02388 2944 aa8.71□□□□□ -1.01
PCNX3-202ENST00000439247 HUWE1Q7Z6Z7 4374 aaKnown RBP8.71□□□□□ -1.01
PCNX3-202ENST00000439247 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.71□□□□□ -1.01
PCNX3-202ENST00000439247 SRRM2Q9UQ35 2752 aaKnown RBP8.71□□□□□ -1.02
PCNX3-202ENST00000439247 K7EIL1 84 aa8.71□□□□□ -1.02
PCNX3-202ENST00000439247 CASC10Q5T4H9 136 aa8.7□□□□□ -1.02
PCNX3-202ENST00000439247 TNP2Q05952 138 aa8.69□□□□□ -1.02
PCNX3-202ENST00000439247 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
PCNX3-202ENST00000439247 Q8NBF4 154 aa8.69□□□□□ -1.02
PCNX3-202ENST00000439247 LCE6AA0A183 80 aa8.68□□□□□ -1.02
PCNX3-202ENST00000439247 ETDCA0A1B0GVM5 59 aa8.68□□□□□ -1.02
PCNX3-202ENST00000439247 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
PCNX3-202ENST00000439247 ZCCHC13Q8WW36 166 aaKnown RBP8.68□□□□□ -1.02
PCNX3-202ENST00000439247 MEGF8Q7Z7M0 2845 aa8.67□□□□□ -1.02
PCNX3-202ENST00000439247 WFDC13Q8IUB5 93 aa8.67□□□□□ -1.02
PCNX3-202ENST00000439247 PRKDCP78527 4128 aaKnown RBP8.66□□□□□ -1.02
PCNX3-202ENST00000439247 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
PCNX3-202ENST00000439247 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
PCNX3-202ENST00000439247 A8MU10 97 aa8.66□□□□□ -1.02
PCNX3-202ENST00000439247 UBE2BP63146 152 aa8.66□□□□□ -1.02
PCNX3-202ENST00000439247 H3BS24 57 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms