RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 C7orf33Q8WU49 177 aa7.9□□□□□ -1.14
HDAC8-214ENST00000439122 DNAH1Q9P2D7 4330 aa7.9□□□□□ -1.14
HDAC8-214ENST00000439122 KCNQ1DNQ9H478 68 aa7.89□□□□□ -1.15
HDAC8-214ENST00000439122 TRBV7-4A0A0J9YYF1 115 aa7.89□□□□□ -1.15
HDAC8-214ENST00000439122 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
HDAC8-214ENST00000439122 HAMPP81172 84 aa7.89□□□□□ -1.15
HDAC8-214ENST00000439122 RMI2Q96E14 147 aa7.89□□□□□ -1.15
HDAC8-214ENST00000439122 FAM168BA1KXE4 195 aa7.88□□□□□ -1.15
HDAC8-214ENST00000439122 Q6ZVQ6 151 aa7.88□□□□□ -1.15
HDAC8-214ENST00000439122 UPK3BQ9BT76 320 aa7.88□□□□□ -1.15
HDAC8-214ENST00000439122 RPL37AP8A6NKH3 93 aa7.87□□□□□ -1.15
HDAC8-214ENST00000439122 LINC01547P58512 204 aaPredicted RBP7.86□□□□□ -1.15
HDAC8-214ENST00000439122 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
HDAC8-214ENST00000439122 DEFB105AQ8NG35 78 aa7.86□□□□□ -1.15
HDAC8-214ENST00000439122 STAB2Q8WWQ8 2551 aa7.85□□□□□ -1.15
HDAC8-214ENST00000439122 PLA2G2DQ9UNK4 145 aa7.85□□□□□ -1.15
HDAC8-214ENST00000439122 COL7A1Q02388 2944 aa7.84□□□□□ -1.15
HDAC8-214ENST00000439122 CRYGAP11844 174 aa7.84□□□□□ -1.15
HDAC8-214ENST00000439122 IGLV1-50A0A075B6I6 118 aa7.83□□□□□ -1.16
HDAC8-214ENST00000439122 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
HDAC8-214ENST00000439122 Q6ZRX8 168 aa7.82□□□□□ -1.16
HDAC8-214ENST00000439122 IGLV5-37A0A075B6J1 123 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 PRYO14603 147 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 KRTAP7-1Q8IUC3 87 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 DNAH10Q8IVF4 4471 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 LOC107984640A0A0U1RRK4 108 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 ETDCA0A1B0GVM5 59 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 CXCL6P80162 114 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 Q8N377 158 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 DHRS4-AS1Q9P1J3 65 aa7.81□□□□□ -1.16
HDAC8-214ENST00000439122 SCXQ7RTU7 201 aa7.8□□□□□ -1.16
HDAC8-214ENST00000439122 MRPL55Q7Z7F7 128 aaKnown RBP7.8□□□□□ -1.16
HDAC8-214ENST00000439122 Q9BRP9 147 aa7.8□□□□□ -1.16
HDAC8-214ENST00000439122 KRTAP4-16G5E9R7 235 aaPredicted RBP7.8□□□□□ -1.16
HDAC8-214ENST00000439122 SMIM20Q8N5G0 67 aa7.8□□□□□ -1.16
HDAC8-214ENST00000439122 CYSTM1Q9H1C7 97 aa7.8□□□□□ -1.16
HDAC8-214ENST00000439122 KRTAP1-5Q9BYS1 174 aa7.79□□□□□ -1.16
HDAC8-214ENST00000439122 SPRR1AP35321 89 aa7.78□□□□□ -1.16
HDAC8-214ENST00000439122 PSCAO43653 123 aa7.77□□□□□ -1.17
HDAC8-214ENST00000439122 UBE2DNLQ8IWF7 75 aa7.77□□□□□ -1.17
HDAC8-214ENST00000439122 C3orf84H3BNL1 204 aa7.77□□□□□ -1.17
HDAC8-214ENST00000439122 ST20-AS1Q8NBB2 130 aa7.77□□□□□ -1.17
HDAC8-214ENST00000439122 TENM2Q9NT68 2774 aa7.76□□□□□ -1.17
HDAC8-214ENST00000439122 DNAH9Q9NYC9 4486 aa7.75□□□□□ -1.17
HDAC8-214ENST00000439122 IGLV5-48A0A075B6I7 105 aa7.75□□□□□ -1.17
HDAC8-214ENST00000439122 UBE2BP63146 152 aa7.75□□□□□ -1.17
HDAC8-214ENST00000439122 DNAH7Q8WXX0 4024 aa7.75□□□□□ -1.17
HDAC8-214ENST00000439122 IGKV2-24A0A0C4DH68 120 aa7.75□□□□□ -1.17
HDAC8-214ENST00000439122 NREPQ16612 68 aa7.75□□□□□ -1.17
HDAC8-214ENST00000439122 REG3GQ6UW15 175 aa7.74□□□□□ -1.17
HDAC8-214ENST00000439122 CSMD3Q7Z407 3707 aa7.74□□□□□ -1.17
HDAC8-214ENST00000439122 ERC2-IT1O76042 136 aa7.74□□□□□ -1.17
HDAC8-214ENST00000439122 A0A096LNI7 61 aa7.73□□□□□ -1.17
HDAC8-214ENST00000439122 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.72□□□□□ -1.17
HDAC8-214ENST00000439122 C16orf90A8MZG2 172 aa7.72□□□□□ -1.17
HDAC8-214ENST00000439122 FUSP35637 526 aaKnown RBP eCLIP7.72□□□□□ -1.17
HDAC8-214ENST00000439122 APLNQ9ULZ1 77 aa7.72□□□□□ -1.17
HDAC8-214ENST00000439122 C20orf197Q8N268 126 aa7.72□□□□□ -1.17
HDAC8-214ENST00000439122 Q8N9L7 120 aa7.72□□□□□ -1.17
HDAC8-214ENST00000439122 TRAV7A0A075B6U4 112 aa7.71□□□□□ -1.18
HDAC8-214ENST00000439122 BCE1O60756 84 aa7.71□□□□□ -1.18
HDAC8-214ENST00000439122 CNBPP62633 177 aaKnown RBP7.71□□□□□ -1.18
HDAC8-214ENST00000439122 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
HDAC8-214ENST00000439122 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
HDAC8-214ENST00000439122 TMEM258P61165 79 aa7.7□□□□□ -1.18
HDAC8-214ENST00000439122 BPY2O14599 106 aa7.69□□□□□ -1.18
HDAC8-214ENST00000439122 TNP2Q05952 138 aa7.69□□□□□ -1.18
HDAC8-214ENST00000439122 MDFIQ99750 246 aa7.69□□□□□ -1.18
HDAC8-214ENST00000439122 A0A1W2PNM2 257 aa7.69□□□□□ -1.18
HDAC8-214ENST00000439122 PRLHP81277 87 aa7.68□□□□□ -1.18
HDAC8-214ENST00000439122 B9D2Q9BPU9 175 aa7.68□□□□□ -1.18
HDAC8-214ENST00000439122 DYNC2H1Q8NCM8 4307 aaKnown RBP7.68□□□□□ -1.18
HDAC8-214ENST00000439122 IGKV4-1P06312 121 aa7.67□□□□□ -1.18
HDAC8-214ENST00000439122 C14orf177Q52M58 125 aa7.67□□□□□ -1.18
HDAC8-214ENST00000439122 CHTF8P0CG12 524 aa7.66□□□□□ -1.18
HDAC8-214ENST00000439122 Q8NBF4 154 aa7.66□□□□□ -1.18
HDAC8-214ENST00000439122 A0A1B0GW54 56 aa7.66□□□□□ -1.18
HDAC8-214ENST00000439122 PLECQ15149 4684 aaKnown RBP7.65□□□□□ -1.18
HDAC8-214ENST00000439122 J3KT08 172 aa7.65□□□□□ -1.18
HDAC8-214ENST00000439122 HIGD2AQ9BW72 106 aa7.65□□□□□ -1.18
HDAC8-214ENST00000439122 F8WEM9 126 aa7.64□□□□□ -1.19
HDAC8-214ENST00000439122 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
HDAC8-214ENST00000439122 SMIM29Q86T20 159 aa7.64□□□□□ -1.19
HDAC8-214ENST00000439122 SPRR4Q96PI1 79 aa7.63□□□□□ -1.19
HDAC8-214ENST00000439122 SNURFQ9Y675 71 aa7.63□□□□□ -1.19
HDAC8-214ENST00000439122 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
HDAC8-214ENST00000439122 LINC00476Q8WZB0 136 aa7.63□□□□□ -1.19
HDAC8-214ENST00000439122 DPH3Q96FX2 82 aa7.62□□□□□ -1.19
HDAC8-214ENST00000439122 A0A0G2JQZ4 141 aa7.62□□□□□ -1.19
HDAC8-214ENST00000439122 NBDYA0A0U1RRE5 68 aa7.62□□□□□ -1.19
HDAC8-214ENST00000439122 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
HDAC8-214ENST00000439122 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
HDAC8-214ENST00000439122 LRCOL1A6NCL2 159 aa7.61□□□□□ -1.19
HDAC8-214ENST00000439122 NUPR2A6NF83 97 aa7.61□□□□□ -1.19
HDAC8-214ENST00000439122 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
HDAC8-214ENST00000439122 KRTAP11-1Q8IUC1 163 aa7.61□□□□□ -1.19
HDAC8-214ENST00000439122 C9orf163Q8N9P6 203 aa7.6□□□□□ -1.19
HDAC8-214ENST00000439122 H7BZZ5 65 aa7.6□□□□□ -1.19
HDAC8-214ENST00000439122 IGFL1Q6UW32 110 aa7.59□□□□□ -1.19
HDAC8-214ENST00000439122 EPM2AB3EWF7 344 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms