RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SCGB1D4Q6XE38 83 aa14.48□□□□□ -0.09
RAPGEF1-206ENST00000438647 ATOH7Q8N100 152 aa14.47□□□□□ -0.09
RAPGEF1-206ENST00000438647 HIST3H2BBQ8N257 126 aa14.47□□□□□ -0.09
RAPGEF1-206ENST00000438647 LINC00304Q8N9R0 145 aa14.47□□□□□ -0.09
RAPGEF1-206ENST00000438647 S100A6P06703 90 aa14.46□□□□□ -0.09
RAPGEF1-206ENST00000438647 ANKRD39Q53RE8 183 aa14.46□□□□□ -0.09
RAPGEF1-206ENST00000438647 SNRPEP62304 92 aaKnown RBP14.45□□□□□ -0.1
RAPGEF1-206ENST00000438647 Q6ZRX8 168 aa14.45□□□□□ -0.1
RAPGEF1-206ENST00000438647 PRR4Q16378 134 aa14.44□□□□□ -0.1
RAPGEF1-206ENST00000438647 HIST1H2BLQ99880 126 aa14.44□□□□□ -0.1
RAPGEF1-206ENST00000438647 ZNF73O43830 326 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF1-206ENST00000438647 JOSD1Q15040 202 aaPredicted RBP14.43□□□□□ -0.1
RAPGEF1-206ENST00000438647 COPS9Q8WXC6 57 aa14.43□□□□□ -0.1
RAPGEF1-206ENST00000438647 SPANXDQ9BXN6 97 aa14.42□□□□□ -0.1
RAPGEF1-206ENST00000438647 HINT1P49773 126 aaPredicted RBP14.41□□□□□ -0.1
RAPGEF1-206ENST00000438647 CTAG1AP78358 180 aa14.41□□□□□ -0.1
RAPGEF1-206ENST00000438647 LINC00518Q8N0U6 118 aa14.41□□□□□ -0.1
RAPGEF1-206ENST00000438647 C3orf22Q8N5N4 141 aa14.41□□□□□ -0.1
RAPGEF1-206ENST00000438647 OR13C6PQ8NH95 151 aa14.41□□□□□ -0.1
RAPGEF1-206ENST00000438647 LPAP08519 4548 aa14.4□□□□□ -0.1
RAPGEF1-206ENST00000438647 Q9BRP9 147 aa14.39□□□□□ -0.11
RAPGEF1-206ENST00000438647 LINC00483Q53H64 154 aa14.38□□□□□ -0.11
RAPGEF1-206ENST00000438647 Q6ZVH6 145 aa14.38□□□□□ -0.11
RAPGEF1-206ENST00000438647 PPDPFQ9H3Y8 114 aa14.38□□□□□ -0.11
RAPGEF1-206ENST00000438647 IFITM1P13164 125 aa14.37□□□□□ -0.11
RAPGEF1-206ENST00000438647 PCP2Q8IVA1 136 aa14.37□□□□□ -0.11
RAPGEF1-206ENST00000438647 ERC2-IT1O76042 136 aa14.36□□□□□ -0.11
RAPGEF1-206ENST00000438647 GAGE2AQ6NT46 116 aa14.36□□□□□ -0.11
RAPGEF1-206ENST00000438647 HSBP1L1C9JCN9 74 aa14.35□□□□□ -0.11
RAPGEF1-206ENST00000438647 SPAG11AQ6PDA7 123 aa14.35□□□□□ -0.11
RAPGEF1-206ENST00000438647 C4orf48Q5BLP8 95 aa14.31□□□□□ -0.12
RAPGEF1-206ENST00000438647 C5orf52A6NGY3 159 aa14.29□□□□□ -0.12
RAPGEF1-206ENST00000438647 RNF213Q63HN8 5207 aa14.27□□□□□ -0.12
RAPGEF1-206ENST00000438647 MUSTN1Q8IVN3 82 aa14.27□□□□□ -0.13
RAPGEF1-206ENST00000438647 Q8NBF4 154 aa14.27□□□□□ -0.13
RAPGEF1-206ENST00000438647 DHRS4-AS1Q9P1J3 65 aa14.27□□□□□ -0.13
RAPGEF1-206ENST00000438647 IGLV9-49A0A0B4J1Y8 123 aa14.24□□□□□ -0.13
RAPGEF1-206ENST00000438647 C6orf99Q4VX62 202 aa14.24□□□□□ -0.13
RAPGEF1-206ENST00000438647 RETNLBQ9BQ08 111 aa14.24□□□□□ -0.13
RAPGEF1-206ENST00000438647 A6NDN8 102 aa14.23□□□□□ -0.13
RAPGEF1-206ENST00000438647 SCGB1D1O95968 90 aa14.23□□□□□ -0.13
RAPGEF1-206ENST00000438647 COX7BP24311 80 aa14.23□□□□□ -0.13
RAPGEF1-206ENST00000438647 ELOF1P60002 83 aaKnown RBP14.23□□□□□ -0.13
RAPGEF1-206ENST00000438647 MOBPQ13875 183 aa14.23□□□□□ -0.13
RAPGEF1-206ENST00000438647 SSBP3-AS1Q7Z2R9 100 aa14.23□□□□□ -0.13
RAPGEF1-206ENST00000438647 TRAV13-2A0A0B4J235 113 aa14.2□□□□□ -0.14
RAPGEF1-206ENST00000438647 TRBV7-6A0A0J9YX20 115 aa14.2□□□□□ -0.14
RAPGEF1-206ENST00000438647 SPINK1P00995 79 aa14.2□□□□□ -0.14
RAPGEF1-206ENST00000438647 ST20-AS1Q8NBB2 130 aa14.2□□□□□ -0.14
RAPGEF1-206ENST00000438647 SLC25A34Q6PIV7 304 aa14.17□□□□□ -0.14
RAPGEF1-206ENST00000438647 A0A1B0GWB2 263 aa14.16□□□□□ -0.14
RAPGEF1-206ENST00000438647 C9orf153Q5TBE3 101 aa14.16□□□□□ -0.14
RAPGEF1-206ENST00000438647 IGLV7-46A0A075B6I9 117 aa14.14□□□□□ -0.15
RAPGEF1-206ENST00000438647 SPRR1BP22528 89 aa14.14□□□□□ -0.15
RAPGEF1-206ENST00000438647 RPS29P62273 56 aaKnown RBP14.12□□□□□ -0.15
RAPGEF1-206ENST00000438647 A4D1N5 150 aa14.11□□□□□ -0.15
RAPGEF1-206ENST00000438647 FP248Q71RG6 208 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF1-206ENST00000438647 TPRXLQ17RH7 258 aa14.1□□□□□ -0.15
RAPGEF1-206ENST00000438647 COX8AP10176 69 aa14.09□□□□□ -0.15
RAPGEF1-206ENST00000438647 TAL2Q16559 108 aa14.09□□□□□ -0.15
RAPGEF1-206ENST00000438647 LAMTOR3Q9UHA4 124 aa14.09□□□□□ -0.15
RAPGEF1-206ENST00000438647 SMIM11BQ8TCY0 68 aa14.08□□□□□ -0.16
RAPGEF1-206ENST00000438647 DLEU1O43261 78 aa14.06□□□□□ -0.16
RAPGEF1-206ENST00000438647 NHP2Q9NX24 153 aaKnown RBP14.06□□□□□ -0.16
RAPGEF1-206ENST00000438647 TEX49A0A1B0GTD5 131 aa14.05□□□□□ -0.16
RAPGEF1-206ENST00000438647 HIST1H4GQ99525 98 aa14.05□□□□□ -0.16
RAPGEF1-206ENST00000438647 CDIP1Q9H305 208 aa14.05□□□□□ -0.16
RAPGEF1-206ENST00000438647 DEFB105AQ8NG35 78 aa14.04□□□□□ -0.16
RAPGEF1-206ENST00000438647 VAMP3Q15836 100 aa14.03□□□□□ -0.16
RAPGEF1-206ENST00000438647 SLC25A20O43772 301 aa14.01□□□□□ -0.17
RAPGEF1-206ENST00000438647 Q8N377 158 aa14.01□□□□□ -0.17
RAPGEF1-206ENST00000438647 PAM16Q9Y3D7 125 aa14.01□□□□□ -0.17
RAPGEF1-206ENST00000438647 SPATA45Q537H7 98 aa13.99□□□□□ -0.17
RAPGEF1-206ENST00000438647 VAMP8Q9BV40 100 aa13.99□□□□□ -0.17
RAPGEF1-206ENST00000438647 IGLV5-48A0A075B6I7 105 aa13.98□□□□□ -0.17
RAPGEF1-206ENST00000438647 Q1RN00 199 aa13.98□□□□□ -0.17
RAPGEF1-206ENST00000438647 C14orf144Q96I85 54 aa13.98□□□□□ -0.17
RAPGEF1-206ENST00000438647 LINC01547P58512 204 aaPredicted RBP13.94□□□□□ -0.18
RAPGEF1-206ENST00000438647 C12orf57Q99622 126 aa13.94□□□□□ -0.18
RAPGEF1-206ENST00000438647 HIGD1BQ9P298 99 aa13.94□□□□□ -0.18
RAPGEF1-206ENST00000438647 LIMD2Q9BT23 127 aa13.93□□□□□ -0.18
RAPGEF1-206ENST00000438647 PRO1933Q9H354 126 aa13.93□□□□□ -0.18
RAPGEF1-206ENST00000438647 LINC00575Q6W349 94 aa13.92□□□□□ -0.18
RAPGEF1-206ENST00000438647 SMIM29Q86T20 159 aa13.92□□□□□ -0.18
RAPGEF1-206ENST00000438647 MUC2Q02817 5179 aa13.92□□□□□ -0.18
RAPGEF1-206ENST00000438647 CD164Q04900 197 aa13.89□□□□□ -0.19
RAPGEF1-206ENST00000438647 KRTAP13-3Q3SY46 172 aa13.89□□□□□ -0.19
RAPGEF1-206ENST00000438647 BVES-AS1Q5T3Y7 98 aa13.89□□□□□ -0.19
RAPGEF1-206ENST00000438647 HRCT1Q6UXD1 115 aa13.89□□□□□ -0.19
RAPGEF1-206ENST00000438647 hADV29S1A0JD25 119 aa13.88□□□□□ -0.19
RAPGEF1-206ENST00000438647 MUC17Q685J3 4493 aa13.87□□□□□ -0.19
RAPGEF1-206ENST00000438647 RAB37Q96AX2 223 aa13.86□□□□□ -0.19
RAPGEF1-206ENST00000438647 C2orf91Q6ZV80 131 aa13.85□□□□□ -0.19
RAPGEF1-206ENST00000438647 H7C2G1 150 aa13.84□□□□□ -0.19
RAPGEF1-206ENST00000438647 CFC1BP0CG36 223 aa13.84□□□□□ -0.19
RAPGEF1-206ENST00000438647 CFC1P0CG37 223 aa13.84□□□□□ -0.19
RAPGEF1-206ENST00000438647 Q6ZQY7 126 aa13.84□□□□□ -0.19
RAPGEF1-206ENST00000438647 A0A0B4J2C4 111 aa13.82□□□□□ -0.2
RAPGEF1-206ENST00000438647 F8WEM9 126 aa13.82□□□□□ -0.2
RAPGEF1-206ENST00000438647 A0A0U1RQV1 116 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms