RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 Q9BRP9 147 aa4.46□□□□□ -1.69
CSDE1-205ENST00000438362 PRLHP81277 87 aa4.46□□□□□ -1.7
CSDE1-205ENST00000438362 TRBV7-4A0A0J9YYF1 115 aa4.46□□□□□ -1.7
CSDE1-205ENST00000438362 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
CSDE1-205ENST00000438362 KRTAP10-3P60369 221 aa4.46□□□□□ -1.7
CSDE1-205ENST00000438362 CASC2Q6XLA1 102 aa4.45□□□□□ -1.7
CSDE1-205ENST00000438362 LINC00474Q9P2X8 69 aa4.45□□□□□ -1.7
CSDE1-205ENST00000438362 GCN1Q92616 2671 aaKnown RBP4.45□□□□□ -1.7
CSDE1-205ENST00000438362 KLKP1Q107X0 134 aa4.45□□□□□ -1.7
CSDE1-205ENST00000438362 IGLV9-49A0A0B4J1Y8 123 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 CR1P17927 2039 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 FLNCQ14315 2725 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 TEX15Q9BXT5 2789 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 KRTAP1-1Q07627 177 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 ST20-AS1Q8NBB2 130 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 KCNQ1DNQ9H478 68 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
CSDE1-205ENST00000438362 C1orf195Q5TG92 126 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 IGSF10Q6WRI0 2623 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 M0R2N4 97 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 C15orf56Q8N910 161 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 ZNF706Q9Y5V0 76 aaPredicted RBP4.43□□□□□ -1.7
CSDE1-205ENST00000438362 ERC2-IT1O76042 136 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 SERTAD4-AS1Q5TG53 156 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 COL12A1Q99715 3063 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 H0Y9P7 68 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 H7BZZ5 65 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 LINC00476Q8WZB0 136 aa4.43□□□□□ -1.7
CSDE1-205ENST00000438362 HELZ2Q9BYK8 2649 aaKnown RBP4.42□□□□□ -1.7
CSDE1-205ENST00000438362 DNAH10OSP0CZ25 163 aa4.42□□□□□ -1.7
CSDE1-205ENST00000438362 ZZEF1O43149 2961 aa4.42□□□□□ -1.7
CSDE1-205ENST00000438362 SPINK6Q6UWN8 80 aa4.42□□□□□ -1.7
CSDE1-205ENST00000438362 DMXL1Q9Y485 3027 aa4.42□□□□□ -1.7
CSDE1-205ENST00000438362 WDFY3Q8IZQ1 3526 aa4.42□□□□□ -1.7
CSDE1-205ENST00000438362 LINC00588Q9Y4M8 146 aa4.42□□□□□ -1.7
CSDE1-205ENST00000438362 hDV103S1A0JD37 113 aa4.41□□□□□ -1.7
CSDE1-205ENST00000438362 PSPHP1O15172 72 aa4.41□□□□□ -1.7
CSDE1-205ENST00000438362 Q8N377 158 aa4.41□□□□□ -1.7
CSDE1-205ENST00000438362 MGAM2Q2M2H8 2515 aa4.41□□□□□ -1.7
CSDE1-205ENST00000438362 A6NED7 52 aa4.41□□□□□ -1.7
CSDE1-205ENST00000438362 FAM168BA1KXE4 195 aa4.4□□□□□ -1.7
CSDE1-205ENST00000438362 NBEAL2Q6ZNJ1 2754 aa4.4□□□□□ -1.7
CSDE1-205ENST00000438362 IGLV1-50A0A075B6I6 118 aa4.4□□□□□ -1.7
CSDE1-205ENST00000438362 ITPR1Q14643 2758 aa4.39□□□□□ -1.71
CSDE1-205ENST00000438362 K7EQZ3 153 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 PCOTHQ58A44 107 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 Q8NDZ9 215 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 UNC79Q9P2D8 2635 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 IGHV6-1A0A0B4J1U7 121 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 KRTAP24-1Q3LI83 254 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 MAST4O15021 2626 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 C16orf90A8MZG2 172 aa4.38□□□□□ -1.71
CSDE1-205ENST00000438362 NUPR2A6NF83 97 aa4.37□□□□□ -1.71
CSDE1-205ENST00000438362 SETXQ7Z333 2677 aaKnown RBP4.37□□□□□ -1.71
CSDE1-205ENST00000438362 TLX1NBP0CAT3 122 aa4.37□□□□□ -1.71
CSDE1-205ENST00000438362 KRTAP10-11P60412 298 aa4.36□□□□□ -1.71
CSDE1-205ENST00000438362 PHF5AQ7RTV0 110 aaKnown RBP4.36□□□□□ -1.71
CSDE1-205ENST00000438362 CYSTM1Q9H1C7 97 aa4.36□□□□□ -1.71
CSDE1-205ENST00000438362 PLA2G2DQ9UNK4 145 aa4.36□□□□□ -1.71
CSDE1-205ENST00000438362 EPM2AB3EWF7 344 aa4.36□□□□□ -1.71
CSDE1-205ENST00000438362 A0A1W2PNM2 257 aa4.35□□□□□ -1.71
CSDE1-205ENST00000438362 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
CSDE1-205ENST00000438362 HRNRQ86YZ3 2850 aaPredicted RBP4.35□□□□□ -1.71
CSDE1-205ENST00000438362 H3BPC8 53 aa4.35□□□□□ -1.71
CSDE1-205ENST00000438362 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
CSDE1-205ENST00000438362 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
CSDE1-205ENST00000438362 IGFL1Q6UW32 110 aa4.34□□□□□ -1.71
CSDE1-205ENST00000438362 DCHS1Q96JQ0 3298 aa4.34□□□□□ -1.71
CSDE1-205ENST00000438362 CHTF8P0CG12 524 aa4.34□□□□□ -1.71
CSDE1-205ENST00000438362 LINC00336Q6ZUF6 198 aa4.34□□□□□ -1.71
CSDE1-205ENST00000438362 LIMD2Q9BT23 127 aa4.34□□□□□ -1.71
CSDE1-205ENST00000438362 ZANQ9Y493 2812 aa4.34□□□□□ -1.72
CSDE1-205ENST00000438362 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
CSDE1-205ENST00000438362 UBR5O95071 2799 aaPredicted RBP4.33□□□□□ -1.72
CSDE1-205ENST00000438362 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
CSDE1-205ENST00000438362 TP53AIP1Q9HCN2 124 aa4.33□□□□□ -1.72
CSDE1-205ENST00000438362 OCR1Q9BZK8 76 aa4.32□□□□□ -1.72
CSDE1-205ENST00000438362 A0A0G2JQZ4 141 aa4.32□□□□□ -1.72
CSDE1-205ENST00000438362 A0A1W2PNN7 141 aa4.32□□□□□ -1.72
CSDE1-205ENST00000438362 CASC10Q5T4H9 136 aa4.32□□□□□ -1.72
CSDE1-205ENST00000438362 LCE2AQ5TA79 106 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-205ENST00000438362 A8MWP4 228 aa4.32□□□□□ -1.72
CSDE1-205ENST00000438362 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
CSDE1-205ENST00000438362 IGLV5-52A0A0A0MRZ9 124 aa4.31□□□□□ -1.72
CSDE1-205ENST00000438362 UTP20O75691 2785 aaKnown RBP4.31□□□□□ -1.72
CSDE1-205ENST00000438362 SEC61GP60059 68 aa4.31□□□□□ -1.72
CSDE1-205ENST00000438362 MOBPQ13875 183 aa4.31□□□□□ -1.72
CSDE1-205ENST00000438362 MDFIQ99750 246 aa4.31□□□□□ -1.72
CSDE1-205ENST00000438362 NOTCH1P46531 2555 aa4.3□□□□□ -1.72
CSDE1-205ENST00000438362 LY6G6CO95867 125 aa4.3□□□□□ -1.72
CSDE1-205ENST00000438362 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
CSDE1-205ENST00000438362 ASH1LQ9NR48 2969 aaKnown RBP4.29□□□□□ -1.72
CSDE1-205ENST00000438362 NBDYA0A0U1RRE5 68 aa4.29□□□□□ -1.72
CSDE1-205ENST00000438362 SPRR4Q96PI1 79 aa4.28□□□□□ -1.72
CSDE1-205ENST00000438362 TEP1Q99973 2627 aaKnown RBP4.28□□□□□ -1.72
CSDE1-205ENST00000438362 K7EIL1 84 aa4.28□□□□□ -1.72
CSDE1-205ENST00000438362 A8MUN3 132 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms