RNA–Protein interactions for RNA: ENST00000438279.1

AC009541.1-201, humanhuman

BASIC

Gene AC009541.1, Length 2,662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009541.1-201ENST00000438279 UBE2BP63146 152 aa0.37□□□□□ -2.35
AC009541.1-201ENST00000438279 TDRG1Q3Y452 100 aa0.37□□□□□ -2.35
AC009541.1-201ENST00000438279 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.37□□□□□ -2.35
AC009541.1-201ENST00000438279 TMEM229BQ8NBD8 167 aa0.37□□□□□ -2.35
AC009541.1-201ENST00000438279 ENY2Q9NPA8 101 aa0.37□□□□□ -2.35
AC009541.1-201ENST00000438279 PRNDQ9UKY0 176 aa0.37□□□□□ -2.35
AC009541.1-201ENST00000438279 LOC110117498A0A087WWA1 95 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TRAV1-2A0A0B4J238 106 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 LINC00959A0A1B0GUT2 108 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 FUOMA2VDF0 154 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 APOC1P02654 83 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 MT1BP07438 61 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 AKAIN1P0CW23 69 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 IFI27P40305 119 aaPredicted RBP0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TMBIM6P55061 237 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 CATR1Q13166 79 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TMEM78Q5T7P6 136 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 COX6B2Q6YFQ2 88 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 BPIFA4PQ86YQ2 179 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 PLEKHB2Q96CS7 222 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 PDCD10Q9BUL8 212 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 WDR61Q9GZS3 305 aaKnown RBP0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 UQCC1Q9NVA1 299 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 SCN3BQ9NY72 215 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TRBV7-3A0A075B6L6 115 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TRBV6-1A0A0K0K1D8 114 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 OOSP1A8MZH6 123 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 M0R2P5 195 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 FABP4P15090 132 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 YPEL3P61236 119 aaPredicted RBP0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 SPAG11BQ08648 103 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 MSMO1Q15800 293 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 SPANXN1Q5VSR9 72 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 C12orf45Q8N5I9 185 aaPredicted RBP0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 NUP35Q8NFH5 326 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 DIRC1Q969H9 104 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TRGV9Q99603 122 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TPRKBQ9Y3C4 175 aa0.36□□□□□ -2.35
AC009541.1-201ENST00000438279 TRBV10-3A0A0K0K1G6 114 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 MAP1LC3B2A6NCE7 125 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 FABP5P3A8MUU1 101 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 HIGD1CA8MV81 97 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 GABARAPH6UMI1 98 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 M0R378 163 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 NDUFB6O95139 128 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 SMIM13P0DJ93 91 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 HIST1H1EP10412 219 aaKnown RBP0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 C1orf195Q5TG92 126 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 BAGE2Q86Y30 109 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 CARD19Q96LW7 228 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 PRRT1Q99946 306 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 SLC25A21Q9BQT8 299 aaPredicted RBP0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 MAP1LC3BQ9GZQ8 125 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 EPDR1Q9UM22 224 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 TGIF2-C20orf24A0A0A6YYL0 155 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 TRAV4A0A0B4J268 109 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 SMIM31A0A1B0GVY4 71 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 PDCD5O14737 125 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 CXCL1P09341 107 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 RAB4BP61018 213 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 ADIRFQ15847 76 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 TMEM128Q5BJH2 165 aa0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 LYRM2Q9NU23 88 aaPredicted RBP0.35□□□□□ -2.35
AC009541.1-201ENST00000438279 TMEM189A5PLL7 270 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 A8MWV9 139 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 RPL7P18124 248 aaKnown RBP0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 SULT1A1P50225 295 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 LINC01554Q52M75 96 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 C9orf153Q5TBE3 101 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 TRIQKQ629K1 86 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 Q6AWC8 147 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 Q6ZRX8 168 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 TSC22D3Q99576 134 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 TMEM126AQ9H061 195 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 CDC42SE2Q9NRR3 84 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 ZFP30Q9Y2G7 519 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 UBE2D4Q9Y2X8 147 aa0.34□□□□□ -2.35
AC009541.1-201ENST00000438279 H3BUA1 57 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 K7ERJ3 54 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 IGLC6P0CF74 106 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 HIST1H1BP16401 226 aaKnown RBP0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 RHOHQ15669 191 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 Q6ZS49 121 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 KCNRGQ8N5I3 272 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 C5orf17Q8NAS9 161 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 C2orf50Q96LR7 162 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 HSPB11Q9Y547 144 aa0.34□□□□□ -2.36
AC009541.1-201ENST00000438279 TRAV21A0A0B4J279 112 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 ATP5HO75947 161 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 TPT1P13693 172 aaKnown RBP0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 UBE2D1P51668 147 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 RPS20P60866 119 aaKnown RBP0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 IFITM2Q01629 132 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 TCEAL7Q9BRU2 100 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 V9GYV3 84 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 TRBV25-1A0A075B6N4 114 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 A0A0D9SG52 128 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 IFNA1P01562 189 aa0.33□□□□□ -2.36
AC009541.1-201ENST00000438279 CRYGAP11844 174 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms