RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 A0A096LNT2 108 aa7.01□□□□□ -1.29
LDLRAD4-204ENST00000435606 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
LDLRAD4-204ENST00000435606 KRTAP10-3P60369 221 aa7.01□□□□□ -1.29
LDLRAD4-204ENST00000435606 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
LDLRAD4-204ENST00000435606 LINC00528Q8N1L1 170 aa7.01□□□□□ -1.29
LDLRAD4-204ENST00000435606 K7EQZ3 153 aa7.01□□□□□ -1.29
LDLRAD4-204ENST00000435606 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
LDLRAD4-204ENST00000435606 APLNQ9ULZ1 77 aa7□□□□□ -1.29
LDLRAD4-204ENST00000435606 LINC01600Q96MT4 127 aa7□□□□□ -1.29
LDLRAD4-204ENST00000435606 SPINT4Q6UDR6 99 aa6.99□□□□□ -1.29
LDLRAD4-204ENST00000435606 ZNF575Q86XF7 245 aa6.99□□□□□ -1.29
LDLRAD4-204ENST00000435606 PRR15Q8IV56 129 aa6.98□□□□□ -1.29
LDLRAD4-204ENST00000435606 CNBPP62633 177 aaKnown RBP6.97□□□□□ -1.29
LDLRAD4-204ENST00000435606 C9orf129Q5T035 196 aaKnown RBP6.97□□□□□ -1.29
LDLRAD4-204ENST00000435606 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
LDLRAD4-204ENST00000435606 PSORS1C2Q9UIG4 136 aa6.97□□□□□ -1.29
LDLRAD4-204ENST00000435606 ERC2-IT1O76042 136 aa6.96□□□□□ -1.29
LDLRAD4-204ENST00000435606 LINC00612Q8N6U2 182 aa6.96□□□□□ -1.29
LDLRAD4-204ENST00000435606 UQCR11O14957 56 aa6.96□□□□□ -1.3
LDLRAD4-204ENST00000435606 SMCPP49901 116 aaPredicted RBP6.95□□□□□ -1.3
LDLRAD4-204ENST00000435606 COA5Q86WW8 74 aa6.95□□□□□ -1.3
LDLRAD4-204ENST00000435606 LITAFQ99732 161 aa6.95□□□□□ -1.3
LDLRAD4-204ENST00000435606 UTRNP46939 3433 aa6.94□□□□□ -1.3
LDLRAD4-204ENST00000435606 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
LDLRAD4-204ENST00000435606 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
LDLRAD4-204ENST00000435606 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
LDLRAD4-204ENST00000435606 CENPFP49454 3210 aa6.92□□□□□ -1.3
LDLRAD4-204ENST00000435606 Q8N377 158 aa6.92□□□□□ -1.3
LDLRAD4-204ENST00000435606 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
LDLRAD4-204ENST00000435606 PRO0461Q9UI25 63 aa6.91□□□□□ -1.3
LDLRAD4-204ENST00000435606 Q6ZSA8 131 aa6.91□□□□□ -1.3
LDLRAD4-204ENST00000435606 A0A1W2PNN7 141 aa6.9□□□□□ -1.31
LDLRAD4-204ENST00000435606 CYP4F30PQ9H0H9 118 aa6.9□□□□□ -1.31
LDLRAD4-204ENST00000435606 ANAPC11Q9NYG5 84 aa6.9□□□□□ -1.31
LDLRAD4-204ENST00000435606 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
LDLRAD4-204ENST00000435606 CASC10Q5T4H9 136 aa6.88□□□□□ -1.31
LDLRAD4-204ENST00000435606 MIR22HGQ0VDD5 57 aa6.87□□□□□ -1.31
LDLRAD4-204ENST00000435606 M0R2T5 61 aa6.87□□□□□ -1.31
LDLRAD4-204ENST00000435606 LINC01554Q52M75 96 aa6.87□□□□□ -1.31
LDLRAD4-204ENST00000435606 USP24Q9UPU5 2620 aa6.86□□□□□ -1.31
LDLRAD4-204ENST00000435606 EPG5Q9HCE0 2579 aa6.86□□□□□ -1.31
LDLRAD4-204ENST00000435606 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
LDLRAD4-204ENST00000435606 CD164Q04900 197 aa6.85□□□□□ -1.31
LDLRAD4-204ENST00000435606 KRTAP1-1Q07627 177 aa6.84□□□□□ -1.31
LDLRAD4-204ENST00000435606 TNP2Q05952 138 aa6.84□□□□□ -1.31
LDLRAD4-204ENST00000435606 C4orf26Q17RF5 130 aa6.82□□□□□ -1.32
LDLRAD4-204ENST00000435606 IGLV5-48A0A075B6I7 105 aa6.8□□□□□ -1.32
LDLRAD4-204ENST00000435606 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
LDLRAD4-204ENST00000435606 FLNBO75369 2602 aaKnown RBP6.8□□□□□ -1.32
LDLRAD4-204ENST00000435606 A0A0G2JQZ4 141 aa6.79□□□□□ -1.32
LDLRAD4-204ENST00000435606 CDC42SE1Q9NRR8 79 aa6.78□□□□□ -1.32
LDLRAD4-204ENST00000435606 FAM229BQ4G0N7 80 aa6.78□□□□□ -1.32
LDLRAD4-204ENST00000435606 Q8N1X5 172 aa6.78□□□□□ -1.32
LDLRAD4-204ENST00000435606 MGAM2Q2M2H8 2515 aa6.77□□□□□ -1.33
LDLRAD4-204ENST00000435606 A0A0D9SG42 100 aa6.77□□□□□ -1.33
LDLRAD4-204ENST00000435606 A8MUN3 132 aa6.77□□□□□ -1.33
LDLRAD4-204ENST00000435606 CR1P17927 2039 aa6.76□□□□□ -1.33
LDLRAD4-204ENST00000435606 HECTD1Q9ULT8 2610 aa6.76□□□□□ -1.33
LDLRAD4-204ENST00000435606 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
LDLRAD4-204ENST00000435606 KLKP1Q107X0 134 aa6.74□□□□□ -1.33
LDLRAD4-204ENST00000435606 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
LDLRAD4-204ENST00000435606 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
LDLRAD4-204ENST00000435606 EIF4EBP3O60516 100 aaPredicted RBP6.73□□□□□ -1.33
LDLRAD4-204ENST00000435606 BPTFQ12830 3046 aa6.73□□□□□ -1.33
LDLRAD4-204ENST00000435606 A0A1W2PNM2 257 aa6.71□□□□□ -1.33
LDLRAD4-204ENST00000435606 WIPF1O43516 503 aa6.71□□□□□ -1.33
LDLRAD4-204ENST00000435606 HRES1P13985 223 aa6.71□□□□□ -1.34
LDLRAD4-204ENST00000435606 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
LDLRAD4-204ENST00000435606 LINC00483Q53H64 154 aa6.7□□□□□ -1.34
LDLRAD4-204ENST00000435606 PLAC8Q9NZF1 115 aa6.69□□□□□ -1.34
LDLRAD4-204ENST00000435606 SEC61BP60468 96 aaKnown RBP6.68□□□□□ -1.34
LDLRAD4-204ENST00000435606 HELZ2Q9BYK8 2649 aaKnown RBP6.68□□□□□ -1.34
LDLRAD4-204ENST00000435606 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
LDLRAD4-204ENST00000435606 FLNAP21333 2647 aaKnown RBP6.67□□□□□ -1.34
LDLRAD4-204ENST00000435606 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
LDLRAD4-204ENST00000435606 ITPR3Q14573 2671 aa6.65□□□□□ -1.35
LDLRAD4-204ENST00000435606 S4R3F8 94 aa6.64□□□□□ -1.35
LDLRAD4-204ENST00000435606 Q5VSD8 79 aa6.63□□□□□ -1.35
LDLRAD4-204ENST00000435606 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
LDLRAD4-204ENST00000435606 LCE6AA0A183 80 aa6.61□□□□□ -1.35
LDLRAD4-204ENST00000435606 H7BZZ5 65 aa6.61□□□□□ -1.35
LDLRAD4-204ENST00000435606 A0A1B0GU33 70 aa6.6□□□□□ -1.35
LDLRAD4-204ENST00000435606 MAST4O15021 2626 aa6.59□□□□□ -1.35
LDLRAD4-204ENST00000435606 PRRC2CQ9Y520 2896 aaKnown RBP6.59□□□□□ -1.36
LDLRAD4-204ENST00000435606 Q1T7F1 81 aa6.58□□□□□ -1.36
LDLRAD4-204ENST00000435606 ATRQ13535 2644 aa6.57□□□□□ -1.36
LDLRAD4-204ENST00000435606 CFAP46Q8IYW2 2715 aa6.56□□□□□ -1.36
LDLRAD4-204ENST00000435606 OXTP01178 125 aa6.55□□□□□ -1.36
LDLRAD4-204ENST00000435606 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
LDLRAD4-204ENST00000435606 KTN1-AS1Q86SY8 53 aa6.54□□□□□ -1.36
LDLRAD4-204ENST00000435606 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
LDLRAD4-204ENST00000435606 PCNTO95613 3336 aa6.53□□□□□ -1.36
LDLRAD4-204ENST00000435606 LCA10Q71F78 164 aa6.53□□□□□ -1.36
LDLRAD4-204ENST00000435606 R4GN34 69 aa6.52□□□□□ -1.37
LDLRAD4-204ENST00000435606 OCR1Q9BZK8 76 aa6.52□□□□□ -1.37
LDLRAD4-204ENST00000435606 DNAH12Q6ZR08 3092 aa6.5□□□□□ -1.37
LDLRAD4-204ENST00000435606 SPRR1AP35321 89 aa6.49□□□□□ -1.37
LDLRAD4-204ENST00000435606 FP248Q71RG6 208 aaPredicted RBP6.49□□□□□ -1.37
LDLRAD4-204ENST00000435606 SPINK7P58062 85 aa6.49□□□□□ -1.37
LDLRAD4-204ENST00000435606 MMP24-AS1A0A0U1RRL7 71 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms