RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 PLA2G1BP04054 148 aaKnown RBP4.96□□□□□ -1.61
GARNL3-205ENST00000435213 DEFB112Q30KQ8 113 aa4.96□□□□□ -1.61
GARNL3-205ENST00000435213 PRB2P02812 416 aaPredicted RBP4.96□□□□□ -1.62
GARNL3-205ENST00000435213 OTOGQ6ZRI0 2925 aa4.96□□□□□ -1.62
GARNL3-205ENST00000435213 IGHV4-30-2A0A087WSY4 118 aa4.96□□□□□ -1.62
GARNL3-205ENST00000435213 LINC01006Q8NI28 216 aa4.96□□□□□ -1.62
GARNL3-205ENST00000435213 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 SLURP1P55000 103 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 A0A087X002 238 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 TRGV1A0A0A0MS02 117 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 STAB1Q9NY15 2570 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 TRGV2A0A075B6R0 118 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 CYSRT1A8MQ03 144 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 IGHV4-31P0DP07 118 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 ZNF702PQ9H963 129 aa4.95□□□□□ -1.62
GARNL3-205ENST00000435213 COL6A5A8TX70 2615 aa4.94□□□□□ -1.62
GARNL3-205ENST00000435213 IGLV4-60A0A075B6I1 120 aa4.94□□□□□ -1.62
GARNL3-205ENST00000435213 FSHBP01225 129 aa4.94□□□□□ -1.62
GARNL3-205ENST00000435213 LINC00575Q6W349 94 aa4.94□□□□□ -1.62
GARNL3-205ENST00000435213 Q8N9L7 120 aa4.94□□□□□ -1.62
GARNL3-205ENST00000435213 SPANXA2-OT1Q8N9U9 137 aa4.94□□□□□ -1.62
GARNL3-205ENST00000435213 TOMM7Q9P0U1 55 aa4.94□□□□□ -1.62
GARNL3-205ENST00000435213 SMR3AQ99954 134 aa4.93□□□□□ -1.62
GARNL3-205ENST00000435213 IGHV3OR16-9A0A0B4J2B5 98 aa4.93□□□□□ -1.62
GARNL3-205ENST00000435213 IGHV6-1A0A0B4J1U7 121 aa4.93□□□□□ -1.62
GARNL3-205ENST00000435213 COX7BP24311 80 aa4.93□□□□□ -1.62
GARNL3-205ENST00000435213 SMIM29Q86T20 159 aa4.93□□□□□ -1.62
GARNL3-205ENST00000435213 C4orf3Q8WVX3 66 aa4.93□□□□□ -1.62
GARNL3-205ENST00000435213 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.92□□□□□ -1.62
GARNL3-205ENST00000435213 DSCR9P59020 149 aa4.92□□□□□ -1.62
GARNL3-205ENST00000435213 WFDC10AQ9H1F0 79 aa4.92□□□□□ -1.62
GARNL3-205ENST00000435213 DEFB136Q30KP8 78 aa4.92□□□□□ -1.62
GARNL3-205ENST00000435213 A0A096LNT2 108 aa4.91□□□□□ -1.62
GARNL3-205ENST00000435213 PDZD2O15018 2839 aa4.91□□□□□ -1.62
GARNL3-205ENST00000435213 PRR3P79522 188 aaKnown RBP4.91□□□□□ -1.62
GARNL3-205ENST00000435213 Q6YL49 198 aa4.91□□□□□ -1.62
GARNL3-205ENST00000435213 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.62
GARNL3-205ENST00000435213 LINC00476Q8WZB0 136 aa4.9□□□□□ -1.63
GARNL3-205ENST00000435213 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
GARNL3-205ENST00000435213 HIGD2BQ4VC39 106 aa4.89□□□□□ -1.63
GARNL3-205ENST00000435213 C16orf74Q96GX8 76 aa4.89□□□□□ -1.63
GARNL3-205ENST00000435213 ZNF469Q96JG9 3925 aaPredicted RBP4.89□□□□□ -1.63
GARNL3-205ENST00000435213 MXRA5Q9NR99 2828 aa4.89□□□□□ -1.63
GARNL3-205ENST00000435213 SPAG11BQ08648 103 aa4.89□□□□□ -1.63
GARNL3-205ENST00000435213 Q6ZQY7 126 aa4.88□□□□□ -1.63
GARNL3-205ENST00000435213 Q8IZM0 81 aa4.88□□□□□ -1.63
GARNL3-205ENST00000435213 NOP10Q9NPE3 64 aaKnown RBP4.88□□□□□ -1.63
GARNL3-205ENST00000435213 NBEAL1Q6ZS30 2694 aa4.88□□□□□ -1.63
GARNL3-205ENST00000435213 IGKV3OR2-268A0A0C4DH90 116 aa4.88□□□□□ -1.63
GARNL3-205ENST00000435213 LINC00612Q8N6U2 182 aa4.88□□□□□ -1.63
GARNL3-205ENST00000435213 NSD1Q96L73 2696 aaPredicted RBP4.87□□□□□ -1.63
GARNL3-205ENST00000435213 LINC00959A0A1B0GUT2 108 aa4.87□□□□□ -1.63
GARNL3-205ENST00000435213 TRGV4A0A0C4DH28 118 aa4.87□□□□□ -1.63
GARNL3-205ENST00000435213 CMC4P56277 68 aaPredicted RBP4.86□□□□□ -1.63
GARNL3-205ENST00000435213 COX17Q14061 63 aa4.86□□□□□ -1.63
GARNL3-205ENST00000435213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.86□□□□□ -1.63
GARNL3-205ENST00000435213 MGAM2Q2M2H8 2515 aa4.86□□□□□ -1.63
GARNL3-205ENST00000435213 H3BPC8 53 aa4.86□□□□□ -1.63
GARNL3-205ENST00000435213 Q8NAQ8 132 aa4.86□□□□□ -1.63
GARNL3-205ENST00000435213 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
GARNL3-205ENST00000435213 DEFB113Q30KQ7 82 aa4.85□□□□□ -1.63
GARNL3-205ENST00000435213 KCNQ1DNQ9H478 68 aa4.85□□□□□ -1.63
GARNL3-205ENST00000435213 X6R8D5 127 aa4.85□□□□□ -1.63
GARNL3-205ENST00000435213 C10orf25Q5T742 122 aa4.84□□□□□ -1.63
GARNL3-205ENST00000435213 COA5Q86WW8 74 aa4.84□□□□□ -1.63
GARNL3-205ENST00000435213 ST20-AS1Q8NBB2 130 aa4.84□□□□□ -1.63
GARNL3-205ENST00000435213 A0A1B0GUV1 79 aa4.84□□□□□ -1.63
GARNL3-205ENST00000435213 IGLV1-51P01701 117 aa4.84□□□□□ -1.63
GARNL3-205ENST00000435213 A0A1B0GW54 56 aa4.84□□□□□ -1.64
GARNL3-205ENST00000435213 GIG44P09565 113 aaPredicted RBP4.84□□□□□ -1.64
GARNL3-205ENST00000435213 SPINK7P58062 85 aa4.84□□□□□ -1.64
GARNL3-205ENST00000435213 C1orf134Q5TEV5 83 aa4.83□□□□□ -1.64
GARNL3-205ENST00000435213 CNBPP62633 177 aaKnown RBP4.83□□□□□ -1.64
GARNL3-205ENST00000435213 NOTCH1P46531 2555 aa4.83□□□□□ -1.64
GARNL3-205ENST00000435213 IGHV4-28A0A0C4DH34 117 aa4.83□□□□□ -1.64
GARNL3-205ENST00000435213 PLAC8Q9NZF1 115 aa4.82□□□□□ -1.64
GARNL3-205ENST00000435213 CR1P17927 2039 aa4.82□□□□□ -1.64
GARNL3-205ENST00000435213 SPAG11AQ6PDA7 123 aa4.81□□□□□ -1.64
GARNL3-205ENST00000435213 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
GARNL3-205ENST00000435213 INAFM1C9JVW0 142 aa4.81□□□□□ -1.64
GARNL3-205ENST00000435213 REG3AQ06141 175 aa4.81□□□□□ -1.64
GARNL3-205ENST00000435213 KLK12Q9UKR0 248 aa4.81□□□□□ -1.64
GARNL3-205ENST00000435213 A0A1W2PNM2 257 aa4.8□□□□□ -1.64
GARNL3-205ENST00000435213 RTL8CO15255 209 aa4.8□□□□□ -1.64
GARNL3-205ENST00000435213 CSAG1Q6PB30 78 aa4.79□□□□□ -1.64
GARNL3-205ENST00000435213 H0Y9P7 68 aa4.79□□□□□ -1.64
GARNL3-205ENST00000435213 GYPEP15421 78 aa4.79□□□□□ -1.64
GARNL3-205ENST00000435213 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
GARNL3-205ENST00000435213 IGLV6-57P01721 117 aa4.78□□□□□ -1.64
GARNL3-205ENST00000435213 C19orf73Q9NVV2 129 aa4.78□□□□□ -1.64
GARNL3-205ENST00000435213 CLPSL2Q6UWE3 100 aa4.78□□□□□ -1.64
GARNL3-205ENST00000435213 Q8NDZ9 215 aa4.78□□□□□ -1.64
GARNL3-205ENST00000435213 CHCHD10Q8WYQ3 142 aaPredicted RBP4.78□□□□□ -1.64
GARNL3-205ENST00000435213 IGHV4-30-4P0DP06 118 aa4.77□□□□□ -1.65
GARNL3-205ENST00000435213 DNAJC9-AS1A6NH13 148 aa4.77□□□□□ -1.65
GARNL3-205ENST00000435213 TENM1Q9UKZ4 2725 aa4.77□□□□□ -1.65
GARNL3-205ENST00000435213 ROMO1P60602 79 aa4.76□□□□□ -1.65
GARNL3-205ENST00000435213 PRO0255Q9UI72 69 aa4.76□□□□□ -1.65
GARNL3-205ENST00000435213 IGLV7-46A0A075B6I9 117 aa4.75□□□□□ -1.65
GARNL3-205ENST00000435213 A0A0J9YWU9 116 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms