RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 KCNQ1DNQ9H478 68 aa12.11□□□□□ -0.47
CLK1-205ENST00000434813 PLA2G2DQ9UNK4 145 aa12.11□□□□□ -0.47
CLK1-205ENST00000434813 C7orf33Q8WU49 177 aa12.1□□□□□ -0.47
CLK1-205ENST00000434813 RMI2Q96E14 147 aa12.1□□□□□ -0.47
CLK1-205ENST00000434813 DNAH1Q9P2D7 4330 aa12.09□□□□□ -0.47
CLK1-205ENST00000434813 CASC10Q5T4H9 136 aa12.08□□□□□ -0.48
CLK1-205ENST00000434813 UPK3BQ9BT76 320 aa12.08□□□□□ -0.48
CLK1-205ENST00000434813 HUWE1Q7Z6Z7 4374 aaKnown RBP12.08□□□□□ -0.48
CLK1-205ENST00000434813 Q6ZVQ6 151 aa12.08□□□□□ -0.48
CLK1-205ENST00000434813 B9D2Q9BPU9 175 aa12.07□□□□□ -0.48
CLK1-205ENST00000434813 IGLV5-37A0A075B6J1 123 aa12.06□□□□□ -0.48
CLK1-205ENST00000434813 CRYGAP11844 174 aa12.06□□□□□ -0.48
CLK1-205ENST00000434813 FAM19A1Q7Z5A9 133 aa12.06□□□□□ -0.48
CLK1-205ENST00000434813 SERP2Q8N6R1 65 aa12.06□□□□□ -0.48
CLK1-205ENST00000434813 LINC01547P58512 204 aaPredicted RBP12.04□□□□□ -0.48
CLK1-205ENST00000434813 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
CLK1-205ENST00000434813 PRYO14603 147 aa12.01□□□□□ -0.49
CLK1-205ENST00000434813 CXCL6P80162 114 aa12.01□□□□□ -0.49
CLK1-205ENST00000434813 FAM168BA1KXE4 195 aa12□□□□□ -0.49
CLK1-205ENST00000434813 FBN3Q75N90 2809 aa12□□□□□ -0.49
CLK1-205ENST00000434813 COL7A1Q02388 2944 aa12□□□□□ -0.49
CLK1-205ENST00000434813 IGLV1-50A0A075B6I6 118 aa11.99□□□□□ -0.49
CLK1-205ENST00000434813 HAMPP81172 84 aa11.99□□□□□ -0.49
CLK1-205ENST00000434813 Q6ZRX8 168 aa11.99□□□□□ -0.49
CLK1-205ENST00000434813 KRTAP4-16G5E9R7 235 aaPredicted RBP11.99□□□□□ -0.49
CLK1-205ENST00000434813 SPRR1AP35321 89 aa11.99□□□□□ -0.49
CLK1-205ENST00000434813 DHRS4-AS1Q9P1J3 65 aa11.99□□□□□ -0.49
CLK1-205ENST00000434813 KRTAP7-1Q8IUC3 87 aa11.98□□□□□ -0.49
CLK1-205ENST00000434813 LOC107984640A0A0U1RRK4 108 aa11.96□□□□□ -0.49
CLK1-205ENST00000434813 RPL37AP8A6NKH3 93 aa11.96□□□□□ -0.49
CLK1-205ENST00000434813 Q8N377 158 aa11.96□□□□□ -0.5
CLK1-205ENST00000434813 STAB2Q8WWQ8 2551 aa11.94□□□□□ -0.5
CLK1-205ENST00000434813 ETDCA0A1B0GVM5 59 aa11.94□□□□□ -0.5
CLK1-205ENST00000434813 BCE1O60756 84 aa11.94□□□□□ -0.5
CLK1-205ENST00000434813 Q9BRP9 147 aa11.94□□□□□ -0.5
CLK1-205ENST00000434813 MRPL55Q7Z7F7 128 aaKnown RBP11.93□□□□□ -0.5
CLK1-205ENST00000434813 IGLV5-48A0A075B6I7 105 aa11.93□□□□□ -0.5
CLK1-205ENST00000434813 FAM19A5Q7Z5A7 132 aaPredicted RBP11.93□□□□□ -0.5
CLK1-205ENST00000434813 DNAH9Q9NYC9 4486 aa11.92□□□□□ -0.5
CLK1-205ENST00000434813 DEFB105AQ8NG35 78 aa11.92□□□□□ -0.5
CLK1-205ENST00000434813 CYSTM1Q9H1C7 97 aa11.92□□□□□ -0.5
CLK1-205ENST00000434813 KRTAP1-5Q9BYS1 174 aa11.9□□□□□ -0.5
CLK1-205ENST00000434813 SMIM20Q8N5G0 67 aa11.89□□□□□ -0.51
CLK1-205ENST00000434813 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
CLK1-205ENST00000434813 CNBPP62633 177 aaKnown RBP11.86□□□□□ -0.51
CLK1-205ENST00000434813 TNP2Q05952 138 aa11.86□□□□□ -0.51
CLK1-205ENST00000434813 TMEM258P61165 79 aa11.85□□□□□ -0.51
CLK1-205ENST00000434813 UBE2DNLQ8IWF7 75 aa11.85□□□□□ -0.51
CLK1-205ENST00000434813 REG3GQ6UW15 175 aa11.84□□□□□ -0.51
CLK1-205ENST00000434813 ST20-AS1Q8NBB2 130 aa11.84□□□□□ -0.51
CLK1-205ENST00000434813 PRKDCP78527 4128 aaKnown RBP11.84□□□□□ -0.51
CLK1-205ENST00000434813 TRAV7A0A075B6U4 112 aa11.84□□□□□ -0.51
CLK1-205ENST00000434813 APLNQ9ULZ1 77 aa11.84□□□□□ -0.51
CLK1-205ENST00000434813 A0A1B0GW54 56 aa11.83□□□□□ -0.52
CLK1-205ENST00000434813 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
CLK1-205ENST00000434813 C16orf90A8MZG2 172 aa11.83□□□□□ -0.52
CLK1-205ENST00000434813 NREPQ16612 68 aa11.82□□□□□ -0.52
CLK1-205ENST00000434813 A0A096LNI7 61 aa11.82□□□□□ -0.52
CLK1-205ENST00000434813 C3orf84H3BNL1 204 aa11.81□□□□□ -0.52
CLK1-205ENST00000434813 ERC2-IT1O76042 136 aa11.81□□□□□ -0.52
CLK1-205ENST00000434813 FUSP35637 526 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLK1-205ENST00000434813 UBE2BP63146 152 aa11.81□□□□□ -0.52
CLK1-205ENST00000434813 PSCAO43653 123 aa11.81□□□□□ -0.52
CLK1-205ENST00000434813 C1orf137Q5JT78 98 aa11.79□□□□□ -0.52
CLK1-205ENST00000434813 A0A1W2PNM2 257 aa11.79□□□□□ -0.52
CLK1-205ENST00000434813 C20orf197Q8N268 126 aa11.78□□□□□ -0.52
CLK1-205ENST00000434813 C14orf177Q52M58 125 aa11.77□□□□□ -0.52
CLK1-205ENST00000434813 DNAH10Q8IVF4 4471 aa11.77□□□□□ -0.52
CLK1-205ENST00000434813 DYNC2H1Q8NCM8 4307 aaKnown RBP11.77□□□□□ -0.53
CLK1-205ENST00000434813 IGKV2-24A0A0C4DH68 120 aa11.77□□□□□ -0.53
CLK1-205ENST00000434813 IGKV4-1P06312 121 aa11.77□□□□□ -0.53
CLK1-205ENST00000434813 Q8NBF4 154 aa11.77□□□□□ -0.53
CLK1-205ENST00000434813 LYSTQ99698 3801 aa11.76□□□□□ -0.53
CLK1-205ENST00000434813 BPY2O14599 106 aa11.76□□□□□ -0.53
CLK1-205ENST00000434813 A0A1W2PNN7 141 aa11.76□□□□□ -0.53
CLK1-205ENST00000434813 J3KT08 172 aa11.75□□□□□ -0.53
CLK1-205ENST00000434813 Q8N9L7 120 aa11.74□□□□□ -0.53
CLK1-205ENST00000434813 CSMD3Q7Z407 3707 aa11.74□□□□□ -0.53
CLK1-205ENST00000434813 SPRR4Q96PI1 79 aa11.74□□□□□ -0.53
CLK1-205ENST00000434813 SMIM29Q86T20 159 aa11.73□□□□□ -0.53
CLK1-205ENST00000434813 TGP01266 2768 aa11.72□□□□□ -0.53
CLK1-205ENST00000434813 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
CLK1-205ENST00000434813 RPS28P62857 69 aaKnown RBP11.72□□□□□ -0.53
CLK1-205ENST00000434813 KLKP1Q107X0 134 aa11.71□□□□□ -0.53
CLK1-205ENST00000434813 PRLHP81277 87 aa11.7□□□□□ -0.54
CLK1-205ENST00000434813 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
CLK1-205ENST00000434813 F8WEM9 126 aa11.68□□□□□ -0.54
CLK1-205ENST00000434813 LINC00476Q8WZB0 136 aa11.68□□□□□ -0.54
CLK1-205ENST00000434813 TENM2Q9NT68 2774 aa11.67□□□□□ -0.54
CLK1-205ENST00000434813 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
CLK1-205ENST00000434813 H7BZZ5 65 aa11.66□□□□□ -0.54
CLK1-205ENST00000434813 PKIGQ9Y2B9 76 aa11.66□□□□□ -0.54
CLK1-205ENST00000434813 NBDYA0A0U1RRE5 68 aa11.65□□□□□ -0.54
CLK1-205ENST00000434813 CHTF8P0CG12 524 aa11.65□□□□□ -0.54
CLK1-205ENST00000434813 C9orf163Q8N9P6 203 aa11.65□□□□□ -0.54
CLK1-205ENST00000434813 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
CLK1-205ENST00000434813 HIGD2AQ9BW72 106 aa11.64□□□□□ -0.55
CLK1-205ENST00000434813 IGLV8-61A0A075B6I0 122 aa11.64□□□□□ -0.55
CLK1-205ENST00000434813 PHF5AQ7RTV0 110 aaKnown RBP11.63□□□□□ -0.55
CLK1-205ENST00000434813 IGFL1Q6UW32 110 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms