RNA–Protein interactions for RNA: ENST00000434274.2

LIMS1-209, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 3

Gene LIMS1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-209ENST00000434274 C3orf22Q8N5N4 141 aa8.61□□□□□ -1.03
LIMS1-209ENST00000434274 ZNF815PA8K554 130 aa8.6□□□□□ -1.03
LIMS1-209ENST00000434274 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
LIMS1-209ENST00000434274 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
LIMS1-209ENST00000434274 ZNF73O43830 326 aaPredicted RBP8.59□□□□□ -1.03
LIMS1-209ENST00000434274 SPINK1P00995 79 aa8.59□□□□□ -1.03
LIMS1-209ENST00000434274 RPS29P62273 56 aaKnown RBP8.59□□□□□ -1.03
LIMS1-209ENST00000434274 LINC00518Q8N0U6 118 aa8.58□□□□□ -1.04
LIMS1-209ENST00000434274 SPANXDQ9BXN6 97 aa8.58□□□□□ -1.04
LIMS1-209ENST00000434274 C3orf79P0CE67 100 aa8.57□□□□□ -1.04
LIMS1-209ENST00000434274 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
LIMS1-209ENST00000434274 SSBP3-AS1Q7Z2R9 100 aa8.57□□□□□ -1.04
LIMS1-209ENST00000434274 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
LIMS1-209ENST00000434274 PPDPFQ9H3Y8 114 aa8.57□□□□□ -1.04
LIMS1-209ENST00000434274 IGLV7-46A0A075B6I9 117 aa8.56□□□□□ -1.04
LIMS1-209ENST00000434274 KRTDAPP60985 99 aa8.56□□□□□ -1.04
LIMS1-209ENST00000434274 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
LIMS1-209ENST00000434274 SLC25A34Q6PIV7 304 aa8.56□□□□□ -1.04
LIMS1-209ENST00000434274 SOSTDC1Q6X4U4 206 aa8.56□□□□□ -1.04
LIMS1-209ENST00000434274 Q8NBF4 154 aa8.56□□□□□ -1.04
LIMS1-209ENST00000434274 NPC2P61916 151 aa8.55□□□□□ -1.04
LIMS1-209ENST00000434274 SNRPEP62304 92 aaKnown RBP8.55□□□□□ -1.04
LIMS1-209ENST00000434274 Q6ZVH6 145 aa8.55□□□□□ -1.04
LIMS1-209ENST00000434274 LITAFQ99732 161 aa8.55□□□□□ -1.04
LIMS1-209ENST00000434274 Q9BRP9 147 aa8.55□□□□□ -1.04
LIMS1-209ENST00000434274 DHRS4-AS1Q9P1J3 65 aa8.55□□□□□ -1.04
LIMS1-209ENST00000434274 SCGB1D4Q6XE38 83 aa8.54□□□□□ -1.04
LIMS1-209ENST00000434274 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
LIMS1-209ENST00000434274 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
LIMS1-209ENST00000434274 IFITM1P13164 125 aa8.53□□□□□ -1.04
LIMS1-209ENST00000434274 OR13C6PQ8NH95 151 aa8.53□□□□□ -1.04
LIMS1-209ENST00000434274 MOBPQ13875 183 aa8.52□□□□□ -1.05
LIMS1-209ENST00000434274 ERC2-IT1O76042 136 aa8.51□□□□□ -1.05
LIMS1-209ENST00000434274 RNF213Q63HN8 5207 aa8.51□□□□□ -1.05
LIMS1-209ENST00000434274 IGLV9-49A0A0B4J1Y8 123 aa8.5□□□□□ -1.05
LIMS1-209ENST00000434274 TRBV7-6A0A0J9YX20 115 aa8.49□□□□□ -1.05
LIMS1-209ENST00000434274 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
LIMS1-209ENST00000434274 SLC25A20O43772 301 aa8.48□□□□□ -1.05
LIMS1-209ENST00000434274 C9orf153Q5TBE3 101 aa8.48□□□□□ -1.05
LIMS1-209ENST00000434274 ELOF1P60002 83 aaKnown RBP8.47□□□□□ -1.05
LIMS1-209ENST00000434274 LPAP08519 4548 aa8.47□□□□□ -1.05
LIMS1-209ENST00000434274 SPRR1BP22528 89 aa8.46□□□□□ -1.06
LIMS1-209ENST00000434274 S100A1P23297 94 aa8.46□□□□□ -1.06
LIMS1-209ENST00000434274 COX7BP24311 80 aa8.46□□□□□ -1.06
LIMS1-209ENST00000434274 A0A1B0GWB2 263 aa8.45□□□□□ -1.06
LIMS1-209ENST00000434274 A4D1N5 150 aa8.45□□□□□ -1.06
LIMS1-209ENST00000434274 HSBP1L1C9JCN9 74 aa8.45□□□□□ -1.06
LIMS1-209ENST00000434274 S100A2P29034 98 aa8.45□□□□□ -1.06
LIMS1-209ENST00000434274 LAMTOR3Q9UHA4 124 aa8.45□□□□□ -1.06
LIMS1-209ENST00000434274 C6orf99Q4VX62 202 aa8.44□□□□□ -1.06
LIMS1-209ENST00000434274 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
LIMS1-209ENST00000434274 TTTY13Q9BZ97 58 aa8.44□□□□□ -1.06
LIMS1-209ENST00000434274 TRAV13-2A0A0B4J235 113 aa8.43□□□□□ -1.06
LIMS1-209ENST00000434274 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
LIMS1-209ENST00000434274 NHP2Q9NX24 153 aaKnown RBP8.43□□□□□ -1.06
LIMS1-209ENST00000434274 Q8N377 158 aa8.42□□□□□ -1.06
LIMS1-209ENST00000434274 A6NDN8 102 aa8.41□□□□□ -1.06
LIMS1-209ENST00000434274 S100A6P06703 90 aa8.41□□□□□ -1.06
LIMS1-209ENST00000434274 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
LIMS1-209ENST00000434274 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.06
LIMS1-209ENST00000434274 ST20-AS1Q8NBB2 130 aa8.4□□□□□ -1.06
LIMS1-209ENST00000434274 TEX49A0A1B0GTD5 131 aa8.39□□□□□ -1.07
LIMS1-209ENST00000434274 TAL2Q16559 108 aa8.39□□□□□ -1.07
LIMS1-209ENST00000434274 HIST3H2BBQ8N257 126 aa8.39□□□□□ -1.07
LIMS1-209ENST00000434274 CD164Q04900 197 aa8.38□□□□□ -1.07
LIMS1-209ENST00000434274 PCP2Q8IVA1 136 aa8.38□□□□□ -1.07
LIMS1-209ENST00000434274 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
LIMS1-209ENST00000434274 MUSTN1Q8IVN3 82 aa8.37□□□□□ -1.07
LIMS1-209ENST00000434274 SEC61BP60468 96 aaKnown RBP8.36□□□□□ -1.07
LIMS1-209ENST00000434274 VAMP3Q15836 100 aa8.36□□□□□ -1.07
LIMS1-209ENST00000434274 PRO1933Q9H354 126 aa8.36□□□□□ -1.07
LIMS1-209ENST00000434274 IGLV5-48A0A075B6I7 105 aa8.33□□□□□ -1.08
LIMS1-209ENST00000434274 ASB16-AS1Q495Z4 193 aa8.33□□□□□ -1.08
LIMS1-209ENST00000434274 H7C2G1 150 aa8.31□□□□□ -1.08
LIMS1-209ENST00000434274 DEFB105AQ8NG35 78 aa8.31□□□□□ -1.08
LIMS1-209ENST00000434274 F8WEM9 126 aa8.3□□□□□ -1.08
LIMS1-209ENST00000434274 Q1RN00 199 aa8.3□□□□□ -1.08
LIMS1-209ENST00000434274 Q5XG85 94 aa8.3□□□□□ -1.08
LIMS1-209ENST00000434274 SMIM11BQ8TCY0 68 aa8.3□□□□□ -1.08
LIMS1-209ENST00000434274 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
LIMS1-209ENST00000434274 XP32Q5T750 250 aa8.27□□□□□ -1.09
LIMS1-209ENST00000434274 MUC2Q02817 5179 aa8.26□□□□□ -1.09
LIMS1-209ENST00000434274 DLEU1O43261 78 aa8.25□□□□□ -1.09
LIMS1-209ENST00000434274 LINC01547P58512 204 aaPredicted RBP8.25□□□□□ -1.09
LIMS1-209ENST00000434274 BVES-AS1Q5T3Y7 98 aa8.25□□□□□ -1.09
LIMS1-209ENST00000434274 PPDPFLQ8WWR9 84 aa8.25□□□□□ -1.09
LIMS1-209ENST00000434274 HIST1H4GQ99525 98 aa8.25□□□□□ -1.09
LIMS1-209ENST00000434274 SNCGO76070 127 aa8.24□□□□□ -1.09
LIMS1-209ENST00000434274 COX8AP10176 69 aa8.24□□□□□ -1.09
LIMS1-209ENST00000434274 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
LIMS1-209ENST00000434274 SMIM29Q86T20 159 aa8.24□□□□□ -1.09
LIMS1-209ENST00000434274 hADV29S1A0JD25 119 aa8.23□□□□□ -1.09
LIMS1-209ENST00000434274 TCL1BO95988 128 aa8.23□□□□□ -1.09
LIMS1-209ENST00000434274 Q6JHZ5 121 aa8.23□□□□□ -1.09
LIMS1-209ENST00000434274 LINC00575Q6W349 94 aa8.23□□□□□ -1.09
LIMS1-209ENST00000434274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.21□□□□□ -1.1
LIMS1-209ENST00000434274 Q6ZQY7 126 aa8.2□□□□□ -1.1
LIMS1-209ENST00000434274 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
LIMS1-209ENST00000434274 HIGD1BQ9P298 99 aa8.19□□□□□ -1.1
LIMS1-209ENST00000434274 OCIAD2Q56VL3 154 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms