RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 NKAPP1Q8N9T2 125 aa8.94□□□□□ -0.98
COL6A3-207ENST00000433762 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
COL6A3-207ENST00000433762 DHRS4-AS1Q9P1J3 65 aa8.93□□□□□ -0.98
COL6A3-207ENST00000433762 COL6A5A8TX70 2615 aa8.93□□□□□ -0.98
COL6A3-207ENST00000433762 PRYO14603 147 aa8.93□□□□□ -0.98
COL6A3-207ENST00000433762 DPH3Q96FX2 82 aa8.93□□□□□ -0.98
COL6A3-207ENST00000433762 RMI2Q96E14 147 aa8.92□□□□□ -0.98
COL6A3-207ENST00000433762 TRAV10A0A0B4J240 114 aa8.92□□□□□ -0.98
COL6A3-207ENST00000433762 MRAPQ8TCY5 172 aa8.92□□□□□ -0.98
COL6A3-207ENST00000433762 IGLV5-48A0A075B6I7 105 aa8.91□□□□□ -0.98
COL6A3-207ENST00000433762 KLKP1Q107X0 134 aa8.91□□□□□ -0.98
COL6A3-207ENST00000433762 C7orf33Q8WU49 177 aa8.91□□□□□ -0.98
COL6A3-207ENST00000433762 SPRR1AP35321 89 aa8.9□□□□□ -0.98
COL6A3-207ENST00000433762 MDFIQ99750 246 aa8.89□□□□□ -0.99
COL6A3-207ENST00000433762 KRTAP4-16G5E9R7 235 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-207ENST00000433762 Q6ZRX8 168 aa8.88□□□□□ -0.99
COL6A3-207ENST00000433762 ERC2-IT1O76042 136 aa8.88□□□□□ -0.99
COL6A3-207ENST00000433762 C20orf197Q8N268 126 aa8.88□□□□□ -0.99
COL6A3-207ENST00000433762 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
COL6A3-207ENST00000433762 IGLV1-50A0A075B6I6 118 aa8.86□□□□□ -0.99
COL6A3-207ENST00000433762 NDUFC1O43677 76 aa8.86□□□□□ -0.99
COL6A3-207ENST00000433762 Q8N377 158 aa8.86□□□□□ -0.99
COL6A3-207ENST00000433762 TRRAPQ9Y4A5 3859 aa8.85□□□□□ -0.99
COL6A3-207ENST00000433762 NREPQ16612 68 aa8.85□□□□□ -0.99
COL6A3-207ENST00000433762 FAM19A5Q7Z5A7 132 aaPredicted RBP8.85□□□□□ -0.99
COL6A3-207ENST00000433762 LINC00588Q9Y4M8 146 aa8.85□□□□□ -0.99
COL6A3-207ENST00000433762 H7BZZ5 65 aa8.84□□□□□ -0.99
COL6A3-207ENST00000433762 DNAH3Q8TD57 4116 aa8.84□□□□□ -0.99
COL6A3-207ENST00000433762 TNP2Q05952 138 aa8.84□□□□□ -0.99
COL6A3-207ENST00000433762 FAM236DA0A1B0GTK5 79 aa8.83□□□□□ -1
COL6A3-207ENST00000433762 FAM236CP0DP71 79 aa8.83□□□□□ -1
COL6A3-207ENST00000433762 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
COL6A3-207ENST00000433762 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
COL6A3-207ENST00000433762 ETDCA0A1B0GVM5 59 aa8.82□□□□□ -1
COL6A3-207ENST00000433762 EPM2AB3EWF7 344 aa8.81□□□□□ -1
COL6A3-207ENST00000433762 IGKV4-1P06312 121 aa8.81□□□□□ -1
COL6A3-207ENST00000433762 ATP5EP56381 51 aaPredicted RBP8.81□□□□□ -1
COL6A3-207ENST00000433762 BPY2O14599 106 aa8.8□□□□□ -1
COL6A3-207ENST00000433762 Q9BRP9 147 aa8.8□□□□□ -1
COL6A3-207ENST00000433762 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
COL6A3-207ENST00000433762 SCXQ7RTU7 201 aa8.79□□□□□ -1
COL6A3-207ENST00000433762 SPRR4Q96PI1 79 aa8.79□□□□□ -1
COL6A3-207ENST00000433762 SERP1Q9Y6X1 66 aa8.79□□□□□ -1
COL6A3-207ENST00000433762 CMYA5Q8N3K9 4069 aa8.78□□□□□ -1
COL6A3-207ENST00000433762 Q8NBF4 154 aa8.78□□□□□ -1
COL6A3-207ENST00000433762 PKD1L1Q8TDX9 2849 aa8.77□□□□□ -1
COL6A3-207ENST00000433762 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
COL6A3-207ENST00000433762 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
COL6A3-207ENST00000433762 DEFB105AQ8NG35 78 aa8.76□□□□□ -1.01
COL6A3-207ENST00000433762 TENM3Q9P273 2699 aa8.76□□□□□ -1.01
COL6A3-207ENST00000433762 OXTP01178 125 aa8.76□□□□□ -1.01
COL6A3-207ENST00000433762 OCR1Q9BZK8 76 aa8.76□□□□□ -1.01
COL6A3-207ENST00000433762 A0A1W2PNM2 257 aa8.75□□□□□ -1.01
COL6A3-207ENST00000433762 FAM168BA1KXE4 195 aa8.75□□□□□ -1.01
COL6A3-207ENST00000433762 RPL37AP8A6NKH3 93 aa8.75□□□□□ -1.01
COL6A3-207ENST00000433762 CASC10Q5T4H9 136 aa8.74□□□□□ -1.01
COL6A3-207ENST00000433762 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
COL6A3-207ENST00000433762 C3orf84H3BNL1 204 aa8.73□□□□□ -1.01
COL6A3-207ENST00000433762 TMEM254Q8TBM7 123 aa8.73□□□□□ -1.01
COL6A3-207ENST00000433762 ANK2Q01484 3957 aa8.73□□□□□ -1.01
COL6A3-207ENST00000433762 CNBPP62633 177 aaKnown RBP8.73□□□□□ -1.01
COL6A3-207ENST00000433762 C5orf47Q569G3 176 aa8.73□□□□□ -1.01
COL6A3-207ENST00000433762 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
COL6A3-207ENST00000433762 F8WEM9 126 aa8.71□□□□□ -1.01
COL6A3-207ENST00000433762 SNURFQ9Y675 71 aa8.71□□□□□ -1.02
COL6A3-207ENST00000433762 C16orf90A8MZG2 172 aa8.7□□□□□ -1.02
COL6A3-207ENST00000433762 IGLV8-61A0A075B6I0 122 aa8.7□□□□□ -1.02
COL6A3-207ENST00000433762 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
COL6A3-207ENST00000433762 UBE2BP63146 152 aa8.7□□□□□ -1.02
COL6A3-207ENST00000433762 LCE6AA0A183 80 aa8.69□□□□□ -1.02
COL6A3-207ENST00000433762 K7EIL1 84 aa8.69□□□□□ -1.02
COL6A3-207ENST00000433762 Q8N9L7 120 aa8.69□□□□□ -1.02
COL6A3-207ENST00000433762 ST20-AS1Q8NBB2 130 aa8.69□□□□□ -1.02
COL6A3-207ENST00000433762 PRB2P02812 416 aaPredicted RBP8.69□□□□□ -1.02
COL6A3-207ENST00000433762 Q5XG85 94 aa8.69□□□□□ -1.02
COL6A3-207ENST00000433762 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
COL6A3-207ENST00000433762 C14orf177Q52M58 125 aa8.68□□□□□ -1.02
COL6A3-207ENST00000433762 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
COL6A3-207ENST00000433762 NOTCH1P46531 2555 aa8.67□□□□□ -1.02
COL6A3-207ENST00000433762 MGAM2Q2M2H8 2515 aa8.66□□□□□ -1.02
COL6A3-207ENST00000433762 H0Y9J4 135 aa8.65□□□□□ -1.02
COL6A3-207ENST00000433762 KRTAP21-3Q3LHN1 58 aa8.65□□□□□ -1.02
COL6A3-207ENST00000433762 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
COL6A3-207ENST00000433762 LINC00476Q8WZB0 136 aa8.64□□□□□ -1.03
COL6A3-207ENST00000433762 DSCR10P59022 87 aa8.64□□□□□ -1.03
COL6A3-207ENST00000433762 A0A096LNI7 61 aa8.63□□□□□ -1.03
COL6A3-207ENST00000433762 NBEAL1Q6ZS30 2694 aa8.63□□□□□ -1.03
COL6A3-207ENST00000433762 SPRR1BP22528 89 aa8.62□□□□□ -1.03
COL6A3-207ENST00000433762 IGFL1Q6UW32 110 aa8.6□□□□□ -1.03
COL6A3-207ENST00000433762 HUWE1Q7Z6Z7 4374 aaKnown RBP8.6□□□□□ -1.03
COL6A3-207ENST00000433762 KRTAP1-5Q9BYS1 174 aa8.59□□□□□ -1.03
COL6A3-207ENST00000433762 PSCAO43653 123 aa8.59□□□□□ -1.03
COL6A3-207ENST00000433762 A0A1W2PNN7 141 aa8.58□□□□□ -1.04
COL6A3-207ENST00000433762 C4orf26Q17RF5 130 aa8.58□□□□□ -1.04
COL6A3-207ENST00000433762 APLNQ9ULZ1 77 aa8.58□□□□□ -1.04
COL6A3-207ENST00000433762 HCG22E2RYF7 251 aa8.57□□□□□ -1.04
COL6A3-207ENST00000433762 K7EQZ3 153 aa8.57□□□□□ -1.04
COL6A3-207ENST00000433762 ZCCHC13Q8WW36 166 aaKnown RBP8.56□□□□□ -1.04
COL6A3-207ENST00000433762 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
COL6A3-207ENST00000433762 UBE2DNLQ8IWF7 75 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms