RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 FAM229BQ4G0N7 80 aa3.23□□□□□ -1.89
HDAC9-213ENST00000433709 TMEM170BQ5T4T1 132 aa3.23□□□□□ -1.89
HDAC9-213ENST00000433709 BAGE3Q86Y29 109 aa3.23□□□□□ -1.89
HDAC9-213ENST00000433709 C18orf32Q8TCD1 76 aa3.23□□□□□ -1.89
HDAC9-213ENST00000433709 TRAV12-1A0A0B4J245 112 aa3.22□□□□□ -1.89
HDAC9-213ENST00000433709 SPINK8P0C7L1 97 aa3.22□□□□□ -1.89
HDAC9-213ENST00000433709 PFN2P35080 140 aa3.22□□□□□ -1.89
HDAC9-213ENST00000433709 ERG28Q9UKR5 140 aa3.22□□□□□ -1.89
HDAC9-213ENST00000433709 CBY1Q9Y3M2 126 aa3.22□□□□□ -1.89
HDAC9-213ENST00000433709 CHTOPQ9Y3Y2 248 aaKnown RBP3.22□□□□□ -1.89
HDAC9-213ENST00000433709 ZNF706Q9Y5V0 76 aaPredicted RBP3.22□□□□□ -1.89
HDAC9-213ENST00000433709 IGKV2D-26A0A0A0MRZ7 120 aa3.21□□□□□ -1.9
HDAC9-213ENST00000433709 A0A0U1RQV1 116 aa3.21□□□□□ -1.9
HDAC9-213ENST00000433709 HSBP1O75506 76 aa3.21□□□□□ -1.9
HDAC9-213ENST00000433709 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
HDAC9-213ENST00000433709 MYMXA0A1B0GTQ4 84 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 LINC00158P58513 81 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 HERVK_113P61574 105 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 IFI27L1Q96BM0 104 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 HIST1H4GQ99525 98 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 SND1-IT1Q9HBX3 110 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 HSPB8Q9UJY1 196 aa3.2□□□□□ -1.9
HDAC9-213ENST00000433709 C11orf86A6NJI1 115 aa3.19□□□□□ -1.9
HDAC9-213ENST00000433709 M0R378 163 aa3.19□□□□□ -1.9
HDAC9-213ENST00000433709 PLNP26678 52 aa3.19□□□□□ -1.9
HDAC9-213ENST00000433709 NMUP48645 174 aa3.19□□□□□ -1.9
HDAC9-213ENST00000433709 MEIG1Q5JSS6 88 aa3.19□□□□□ -1.9
HDAC9-213ENST00000433709 FAM19A1Q7Z5A9 133 aa3.19□□□□□ -1.9
HDAC9-213ENST00000433709 VPS13BQ7Z7G8 4022 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 A0A096LNJ9 63 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 TMEM223A0PJW6 202 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 LEPROTL1O95214 131 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 PLEKHB2Q96CS7 222 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 ZNF625Q96I27 306 aaPredicted RBP3.18□□□□□ -1.9
HDAC9-213ENST00000433709 MIEN1Q9BRT3 115 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 TMEM126AQ9H061 195 aa3.18□□□□□ -1.9
HDAC9-213ENST00000433709 HINT1P49773 126 aaPredicted RBP3.17□□□□□ -1.9
HDAC9-213ENST00000433709 AKR1D1P51857 326 aa3.17□□□□□ -1.9
HDAC9-213ENST00000433709 JOSD1Q15040 202 aaPredicted RBP3.17□□□□□ -1.9
HDAC9-213ENST00000433709 PMCHL1Q16048 86 aa3.17□□□□□ -1.9
HDAC9-213ENST00000433709 LINC00304Q8N9R0 145 aa3.17□□□□□ -1.9
HDAC9-213ENST00000433709 NDUFA12Q9UI09 145 aa3.17□□□□□ -1.9
HDAC9-213ENST00000433709 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
HDAC9-213ENST00000433709 ETDCA0A1B0GVM5 59 aa3.16□□□□□ -1.9
HDAC9-213ENST00000433709 LEPROTO15243 131 aa3.16□□□□□ -1.9
HDAC9-213ENST00000433709 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
HDAC9-213ENST00000433709 KRTAP13-1Q8IUC0 172 aa3.16□□□□□ -1.9
HDAC9-213ENST00000433709 BOD1L2Q8IYS8 172 aa3.16□□□□□ -1.9
HDAC9-213ENST00000433709 LINC00337Q8N6G1 96 aa3.16□□□□□ -1.9
HDAC9-213ENST00000433709 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
HDAC9-213ENST00000433709 LOC107984156A0A0G2JMH3 177 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 DPM2O94777 84 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 NDUFC2O95298 119 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 TSPAN13O95857 204 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 S100A7L2Q5SY68 101 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 ARL17AQ8IVW1 177 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 FAM19A2Q8N3H0 131 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 COPS9Q8WXC6 57 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 HIGD2AQ9BW72 106 aa3.15□□□□□ -1.91
HDAC9-213ENST00000433709 J3QQQ9 107 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 SPINK1P00995 79 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 IGKCP01834 107 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 TRGC2P03986 189 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 SMIM13P0DJ93 91 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 PRLHP81277 87 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 SLC25A34Q6PIV7 304 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 FP248Q71RG6 208 aaPredicted RBP3.14□□□□□ -1.91
HDAC9-213ENST00000433709 SSBP3-AS1Q7Z2R9 100 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 YPEL4Q96NS1 127 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 SPANXB1Q9NS25 103 aaPredicted RBP3.14□□□□□ -1.91
HDAC9-213ENST00000433709 MYCBP2O75592 4640 aa3.14□□□□□ -1.91
HDAC9-213ENST00000433709 TMEM238C9JI98 176 aa3.13□□□□□ -1.91
HDAC9-213ENST00000433709 H0Y8G0 127 aa3.13□□□□□ -1.91
HDAC9-213ENST00000433709 DDTP30046 118 aa3.13□□□□□ -1.91
HDAC9-213ENST00000433709 SPRR1AP35321 89 aa3.13□□□□□ -1.91
HDAC9-213ENST00000433709 RPS29P62273 56 aaKnown RBP3.13□□□□□ -1.91
HDAC9-213ENST00000433709 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
HDAC9-213ENST00000433709 SPRR4Q96PI1 79 aa3.13□□□□□ -1.91
HDAC9-213ENST00000433709 FAT1Q14517 4588 aa3.13□□□□□ -1.91
HDAC9-213ENST00000433709 TRBV10-3A0A0K0K1G6 114 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 C20orf202A1L168 122 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 NCR3O14931 201 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 TIMM17BO60830 172 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 SCO1O75880 301 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 FABP4P15090 132 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 KRTAP13-2Q52LG2 175 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 Q6ZRX8 168 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 SMCR5Q8TEV8 140 aa3.11□□□□□ -1.91
HDAC9-213ENST00000433709 TRAV23DV6A0A075B6W5 121 aa3.1□□□□□ -1.91
HDAC9-213ENST00000433709 SLC25A20O43772 301 aa3.1□□□□□ -1.91
HDAC9-213ENST00000433709 LINC00483Q53H64 154 aa3.1□□□□□ -1.91
HDAC9-213ENST00000433709 SPANXCQ9NY87 97 aa3.1□□□□□ -1.91
HDAC9-213ENST00000433709 DNAH8Q96JB1 4490 aa3.09□□□□□ -1.91
HDAC9-213ENST00000433709 COLCA2A8K830 154 aa3.09□□□□□ -1.91
HDAC9-213ENST00000433709 SYS1-DBNDD2H3BUS1 97 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms