RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 CBY1Q9Y3M2 126 aa8.01□□□□□ -1.13
NUP50-209ENST00000432340 S100A7L2Q5SY68 101 aa8□□□□□ -1.13
NUP50-209ENST00000432340 SMIM29Q86T20 159 aa8□□□□□ -1.13
NUP50-209ENST00000432340 HERV-K104P63124 156 aa7.99□□□□□ -1.13
NUP50-209ENST00000432340 TCL1BO95988 128 aa7.98□□□□□ -1.13
NUP50-209ENST00000432340 CHTOPQ9Y3Y2 248 aaKnown RBP7.98□□□□□ -1.13
NUP50-209ENST00000432340 LGALS3P17931 250 aaKnown RBP7.97□□□□□ -1.13
NUP50-209ENST00000432340 AKR1D1P51857 326 aa7.97□□□□□ -1.13
NUP50-209ENST00000432340 SPANXB1Q9NS25 103 aaPredicted RBP7.97□□□□□ -1.13
NUP50-209ENST00000432340 TRAV23DV6A0A075B6W5 121 aa7.96□□□□□ -1.14
NUP50-209ENST00000432340 ZNF73O43830 326 aaPredicted RBP7.96□□□□□ -1.14
NUP50-209ENST00000432340 LINC01546A6NGU7 62 aa7.95□□□□□ -1.14
NUP50-209ENST00000432340 SMCO4Q9NRQ5 59 aa7.95□□□□□ -1.14
NUP50-209ENST00000432340 FAM236DA0A1B0GTK5 79 aa7.94□□□□□ -1.14
NUP50-209ENST00000432340 FAM236CP0DP71 79 aa7.94□□□□□ -1.14
NUP50-209ENST00000432340 COMMD7Q86VX2 200 aa7.94□□□□□ -1.14
NUP50-209ENST00000432340 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
NUP50-209ENST00000432340 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
NUP50-209ENST00000432340 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
NUP50-209ENST00000432340 C11orf86A6NJI1 115 aa7.92□□□□□ -1.14
NUP50-209ENST00000432340 MT-ND4LP03901 98 aa7.92□□□□□ -1.14
NUP50-209ENST00000432340 ANAPC16Q96DE5 110 aa7.92□□□□□ -1.14
NUP50-209ENST00000432340 LOC107984156A0A0G2JMH3 177 aa7.91□□□□□ -1.14
NUP50-209ENST00000432340 Q1RN00 199 aa7.91□□□□□ -1.14
NUP50-209ENST00000432340 ARL17AQ8IVW1 177 aa7.91□□□□□ -1.14
NUP50-209ENST00000432340 PCP2Q8IVA1 136 aa7.9□□□□□ -1.14
NUP50-209ENST00000432340 TAL2Q16559 108 aa7.89□□□□□ -1.15
NUP50-209ENST00000432340 CLLU1Q5K131 121 aa7.89□□□□□ -1.15
NUP50-209ENST00000432340 BAGE3Q86Y29 109 aa7.89□□□□□ -1.15
NUP50-209ENST00000432340 OBSCN-AS1Q96MR7 158 aa7.89□□□□□ -1.15
NUP50-209ENST00000432340 NDUFC2O95298 119 aa7.88□□□□□ -1.15
NUP50-209ENST00000432340 MYMXA0A1B0GTQ4 84 aa7.87□□□□□ -1.15
NUP50-209ENST00000432340 TEX49A0A1B0GTD5 131 aa7.86□□□□□ -1.15
NUP50-209ENST00000432340 TMEM223A0PJW6 202 aa7.86□□□□□ -1.15
NUP50-209ENST00000432340 HBDP02042 147 aa7.85□□□□□ -1.15
NUP50-209ENST00000432340 UQCC3Q6UW78 93 aa7.85□□□□□ -1.15
NUP50-209ENST00000432340 IFITM2Q01629 132 aa7.84□□□□□ -1.15
NUP50-209ENST00000432340 RBM12B-AS1Q9P1G2 102 aa7.84□□□□□ -1.15
NUP50-209ENST00000432340 TMEM218A2RU14 115 aa7.83□□□□□ -1.16
NUP50-209ENST00000432340 DEFB105AQ8NG35 78 aa7.82□□□□□ -1.16
NUP50-209ENST00000432340 Q96NJ1 140 aa7.79□□□□□ -1.16
NUP50-209ENST00000432340 SEC11CQ9BY50 192 aa7.79□□□□□ -1.16
NUP50-209ENST00000432340 MUC12Q9UKN1 5478 aa7.79□□□□□ -1.16
NUP50-209ENST00000432340 RHEBQ15382 184 aa7.78□□□□□ -1.16
NUP50-209ENST00000432340 A0A096LNJ9 63 aa7.74□□□□□ -1.17
NUP50-209ENST00000432340 A0A0G2JQZ4 141 aa7.74□□□□□ -1.17
NUP50-209ENST00000432340 S100PP25815 95 aa7.74□□□□□ -1.17
NUP50-209ENST00000432340 COX19Q49B96 90 aa7.74□□□□□ -1.17
NUP50-209ENST00000432340 COX7BP24311 80 aa7.73□□□□□ -1.17
NUP50-209ENST00000432340 ELOF1P60002 83 aaKnown RBP7.73□□□□□ -1.17
NUP50-209ENST00000432340 IGFL1Q6UW32 110 aa7.73□□□□□ -1.17
NUP50-209ENST00000432340 Q6ZVH6 145 aa7.73□□□□□ -1.17
NUP50-209ENST00000432340 TRAV12-1A0A0B4J245 112 aa7.72□□□□□ -1.17
NUP50-209ENST00000432340 LINC00614P0C842 121 aa7.72□□□□□ -1.17
NUP50-209ENST00000432340 MTURNQ8N3F0 131 aa7.72□□□□□ -1.17
NUP50-209ENST00000432340 OR13C6PQ8NH95 151 aa7.72□□□□□ -1.17
NUP50-209ENST00000432340 A8MUU9 505 aa7.7□□□□□ -1.18
NUP50-209ENST00000432340 F8WEM9 126 aa7.69□□□□□ -1.18
NUP50-209ENST00000432340 KRTAP2-3P0C7H8 128 aa7.69□□□□□ -1.18
NUP50-209ENST00000432340 NMUP48645 174 aa7.69□□□□□ -1.18
NUP50-209ENST00000432340 KRTAP2-4Q9BYR9 128 aa7.69□□□□□ -1.18
NUP50-209ENST00000432340 IGLV5-48A0A075B6I7 105 aa7.68□□□□□ -1.18
NUP50-209ENST00000432340 A8MWP4 228 aa7.68□□□□□ -1.18
NUP50-209ENST00000432340 FABP9Q0Z7S8 132 aa7.68□□□□□ -1.18
NUP50-209ENST00000432340 RPS10P5Q9NQ39 176 aa7.67□□□□□ -1.18
NUP50-209ENST00000432340 ZNF815PA8K554 130 aa7.66□□□□□ -1.18
NUP50-209ENST00000432340 PMCHL1Q16048 86 aa7.66□□□□□ -1.18
NUP50-209ENST00000432340 SPANXDQ9BXN6 97 aa7.66□□□□□ -1.18
NUP50-209ENST00000432340 LEPROTO15243 131 aa7.65□□□□□ -1.18
NUP50-209ENST00000432340 SPANXCQ9NY87 97 aa7.65□□□□□ -1.18
NUP50-209ENST00000432340 TRBV7-6A0A0J9YX20 115 aa7.64□□□□□ -1.19
NUP50-209ENST00000432340 TRBV7-7A0A0K0K1E9 115 aa7.64□□□□□ -1.19
NUP50-209ENST00000432340 Q6JHZ5 121 aa7.64□□□□□ -1.19
NUP50-209ENST00000432340 MPLKIPQ8TAP9 179 aa7.64□□□□□ -1.19
NUP50-209ENST00000432340 IFI27L1Q96BM0 104 aa7.63□□□□□ -1.19
NUP50-209ENST00000432340 URB1-AS1Q96HZ7 61 aa7.63□□□□□ -1.19
NUP50-209ENST00000432340 J3QQQ9 107 aa7.62□□□□□ -1.19
NUP50-209ENST00000432340 LST1O00453 97 aa7.62□□□□□ -1.19
NUP50-209ENST00000432340 NPC2P61916 151 aa7.62□□□□□ -1.19
NUP50-209ENST00000432340 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
NUP50-209ENST00000432340 C18orf32Q8TCD1 76 aa7.62□□□□□ -1.19
NUP50-209ENST00000432340 KRTAP3-3Q9BYR6 98 aa7.62□□□□□ -1.19
NUP50-209ENST00000432340 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
NUP50-209ENST00000432340 TRAPPC1Q9Y5R8 145 aa7.62□□□□□ -1.19
NUP50-209ENST00000432340 HERVK_113P61574 105 aa7.61□□□□□ -1.19
NUP50-209ENST00000432340 SOSTDC1Q6X4U4 206 aa7.61□□□□□ -1.19
NUP50-209ENST00000432340 A0A1B0GWB2 263 aa7.6□□□□□ -1.19
NUP50-209ENST00000432340 SVBPQ8N300 66 aa7.6□□□□□ -1.19
NUP50-209ENST00000432340 NHP2Q9NX24 153 aaKnown RBP7.6□□□□□ -1.19
NUP50-209ENST00000432340 SNAPINO95295 136 aa7.59□□□□□ -1.19
NUP50-209ENST00000432340 APOC3P02656 99 aa7.59□□□□□ -1.19
NUP50-209ENST00000432340 HRES1P13985 223 aa7.59□□□□□ -1.19
NUP50-209ENST00000432340 TSPEAR-AS2P59090 65 aa7.59□□□□□ -1.19
NUP50-209ENST00000432340 LINC00518Q8N0U6 118 aa7.59□□□□□ -1.19
NUP50-209ENST00000432340 CLEC2BQ92478 149 aa7.59□□□□□ -1.19
NUP50-209ENST00000432340 KRTAP5-9P26371 169 aa7.58□□□□□ -1.2
NUP50-209ENST00000432340 YPEL4Q96NS1 127 aa7.58□□□□□ -1.2
NUP50-209ENST00000432340 A4D1N5 150 aa7.57□□□□□ -1.2
NUP50-209ENST00000432340 A6NN06 94 aa7.57□□□□□ -1.2
NUP50-209ENST00000432340 NDUFA5Q16718 116 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms