RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 MYCBP2O75592 4640 aa11.13□□□□□ -0.63
RFTN1-202ENST00000431547 TRAV23DV6A0A075B6W5 121 aa11.13□□□□□ -0.63
RFTN1-202ENST00000431547 PRLHP81277 87 aa11.13□□□□□ -0.63
RFTN1-202ENST00000431547 ETDCA0A1B0GVM5 59 aa11.12□□□□□ -0.63
RFTN1-202ENST00000431547 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
RFTN1-202ENST00000431547 LINC01600Q96MT4 127 aa11.11□□□□□ -0.63
RFTN1-202ENST00000431547 A4D1N5 150 aa11.1□□□□□ -0.63
RFTN1-202ENST00000431547 ZNF73O43830 326 aaPredicted RBP11.1□□□□□ -0.63
RFTN1-202ENST00000431547 B5MCH6 92 aa11.09□□□□□ -0.63
RFTN1-202ENST00000431547 TRAV13-2A0A0B4J235 113 aa11.08□□□□□ -0.64
RFTN1-202ENST00000431547 LOC105371267A0A1B0GV96 52 aa11.08□□□□□ -0.64
RFTN1-202ENST00000431547 A6NDN8 102 aa11.08□□□□□ -0.64
RFTN1-202ENST00000431547 J3QL48 77 aa11.08□□□□□ -0.64
RFTN1-202ENST00000431547 KRTAP1-4P0C5Y4 121 aa11.07□□□□□ -0.64
RFTN1-202ENST00000431547 SMIM6P0DI80 62 aa11.07□□□□□ -0.64
RFTN1-202ENST00000431547 TAL2Q16559 108 aa11.07□□□□□ -0.64
RFTN1-202ENST00000431547 LRP1Q07954 4544 aaKnown RBP11.07□□□□□ -0.64
RFTN1-202ENST00000431547 HIGD2AQ9BW72 106 aa11.06□□□□□ -0.64
RFTN1-202ENST00000431547 HINT1P49773 126 aaPredicted RBP11.05□□□□□ -0.64
RFTN1-202ENST00000431547 Q6ZRX8 168 aa11.05□□□□□ -0.64
RFTN1-202ENST00000431547 UQCR10Q9UDW1 63 aa11.05□□□□□ -0.64
RFTN1-202ENST00000431547 FAT3Q8TDW7 4589 aa11.05□□□□□ -0.64
RFTN1-202ENST00000431547 MT1HL1P0DM35 61 aa11.04□□□□□ -0.64
RFTN1-202ENST00000431547 SMCR5Q8TEV8 140 aa11.03□□□□□ -0.64
RFTN1-202ENST00000431547 KRTAP10-8P60410 259 aa11.02□□□□□ -0.65
RFTN1-202ENST00000431547 CEND1Q8N111 149 aa11.02□□□□□ -0.65
RFTN1-202ENST00000431547 C6orf99Q4VX62 202 aa11.01□□□□□ -0.65
RFTN1-202ENST00000431547 Q9BRP9 147 aa11.01□□□□□ -0.65
RFTN1-202ENST00000431547 TRBV7-6A0A0J9YX20 115 aa11□□□□□ -0.65
RFTN1-202ENST00000431547 SMIM11BQ8TCY0 68 aa10.99□□□□□ -0.65
RFTN1-202ENST00000431547 C12orf57Q99622 126 aa10.99□□□□□ -0.65
RFTN1-202ENST00000431547 CFC1BP0CG36 223 aa10.98□□□□□ -0.65
RFTN1-202ENST00000431547 CFC1P0CG37 223 aa10.98□□□□□ -0.65
RFTN1-202ENST00000431547 COX7BP24311 80 aa10.98□□□□□ -0.65
RFTN1-202ENST00000431547 ELOF1P60002 83 aaKnown RBP10.98□□□□□ -0.65
RFTN1-202ENST00000431547 HSD52Q0P140 79 aa10.98□□□□□ -0.65
RFTN1-202ENST00000431547 PRR26Q8N8Z3 221 aa10.98□□□□□ -0.65
RFTN1-202ENST00000431547 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
RFTN1-202ENST00000431547 ERC2-IT1O76042 136 aa10.97□□□□□ -0.65
RFTN1-202ENST00000431547 SPRR4Q96PI1 79 aa10.97□□□□□ -0.65
RFTN1-202ENST00000431547 A0A0B4J2C4 111 aa10.96□□□□□ -0.65
RFTN1-202ENST00000431547 TMEM238LA0A1B0GVL6 79 aa10.96□□□□□ -0.65
RFTN1-202ENST00000431547 A6NJY4 79 aa10.96□□□□□ -0.65
RFTN1-202ENST00000431547 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
RFTN1-202ENST00000431547 FAM229BQ4G0N7 80 aa10.96□□□□□ -0.65
RFTN1-202ENST00000431547 PRO1933Q9H354 126 aa10.96□□□□□ -0.65
RFTN1-202ENST00000431547 A0A1B0GWB2 263 aa10.95□□□□□ -0.66
RFTN1-202ENST00000431547 FXYD2P54710 66 aa10.95□□□□□ -0.66
RFTN1-202ENST00000431547 RAB37Q96AX2 223 aa10.95□□□□□ -0.66
RFTN1-202ENST00000431547 ANAPC11Q9NYG5 84 aa10.95□□□□□ -0.66
RFTN1-202ENST00000431547 DHRS4-AS1Q9P1J3 65 aa10.95□□□□□ -0.66
RFTN1-202ENST00000431547 DMBT1Q9UGM3 2413 aaPredicted RBP10.94□□□□□ -0.66
RFTN1-202ENST00000431547 CRYGAP11844 174 aa10.94□□□□□ -0.66
RFTN1-202ENST00000431547 A0A087X002 238 aa10.93□□□□□ -0.66
RFTN1-202ENST00000431547 VAMP3Q15836 100 aa10.92□□□□□ -0.66
RFTN1-202ENST00000431547 LINC00483Q53H64 154 aa10.9□□□□□ -0.66
RFTN1-202ENST00000431547 PRO1854Q9UHT4 67 aa10.89□□□□□ -0.67
RFTN1-202ENST00000431547 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
RFTN1-202ENST00000431547 GAGE2AQ6NT46 116 aa10.88□□□□□ -0.67
RFTN1-202ENST00000431547 TNXBP22105 4242 aa10.88□□□□□ -0.67
RFTN1-202ENST00000431547 H7C2G1 150 aa10.87□□□□□ -0.67
RFTN1-202ENST00000431547 TSTD3H0UI37 97 aa10.86□□□□□ -0.67
RFTN1-202ENST00000431547 BVES-AS1Q5T3Y7 98 aa10.86□□□□□ -0.67
RFTN1-202ENST00000431547 ST20-AS1Q8NBB2 130 aa10.86□□□□□ -0.67
RFTN1-202ENST00000431547 TYMSOSQ8TAI1 123 aa10.86□□□□□ -0.67
RFTN1-202ENST00000431547 NHP2Q9NX24 153 aaKnown RBP10.86□□□□□ -0.67
RFTN1-202ENST00000431547 LINC00575Q6W349 94 aa10.84□□□□□ -0.67
RFTN1-202ENST00000431547 SLC25A20O43772 301 aa10.83□□□□□ -0.68
RFTN1-202ENST00000431547 CTAG1AP78358 180 aa10.83□□□□□ -0.68
RFTN1-202ENST00000431547 SPRR1BP22528 89 aa10.82□□□□□ -0.68
RFTN1-202ENST00000431547 Q1RN00 199 aa10.82□□□□□ -0.68
RFTN1-202ENST00000431547 C3orf22Q8N5N4 141 aa10.81□□□□□ -0.68
RFTN1-202ENST00000431547 HERC1Q15751 4861 aa10.8□□□□□ -0.68
RFTN1-202ENST00000431547 K7ERJ3 54 aa10.8□□□□□ -0.68
RFTN1-202ENST00000431547 hADV29S1A0JD25 119 aa10.79□□□□□ -0.68
RFTN1-202ENST00000431547 H0YGX0 51 aa10.79□□□□□ -0.68
RFTN1-202ENST00000431547 M0R143 59 aa10.79□□□□□ -0.68
RFTN1-202ENST00000431547 TEX49A0A1B0GTD5 131 aa10.78□□□□□ -0.68
RFTN1-202ENST00000431547 IGLV5-48A0A075B6I7 105 aa10.77□□□□□ -0.69
RFTN1-202ENST00000431547 DEFB105AQ8NG35 78 aa10.77□□□□□ -0.69
RFTN1-202ENST00000431547 LINC01547P58512 204 aaPredicted RBP10.76□□□□□ -0.69
RFTN1-202ENST00000431547 IGLV9-49A0A0B4J1Y8 123 aa10.74□□□□□ -0.69
RFTN1-202ENST00000431547 TRIAP1O43715 76 aa10.74□□□□□ -0.69
RFTN1-202ENST00000431547 TSPAN13O95857 204 aa10.74□□□□□ -0.69
RFTN1-202ENST00000431547 SSBP3-AS1Q7Z2R9 100 aa10.74□□□□□ -0.69
RFTN1-202ENST00000431547 LAMTOR3Q9UHA4 124 aa10.74□□□□□ -0.69
RFTN1-202ENST00000431547 SNCGO76070 127 aa10.73□□□□□ -0.69
RFTN1-202ENST00000431547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.73□□□□□ -0.69
RFTN1-202ENST00000431547 Q6ZQY7 126 aa10.73□□□□□ -0.69
RFTN1-202ENST00000431547 LINC00304Q8N9R0 145 aa10.73□□□□□ -0.69
RFTN1-202ENST00000431547 PSMB2P49721 201 aa10.72□□□□□ -0.69
RFTN1-202ENST00000431547 MOBPQ13875 183 aa10.72□□□□□ -0.69
RFTN1-202ENST00000431547 Q8N377 158 aa10.72□□□□□ -0.69
RFTN1-202ENST00000431547 SMIM29Q86T20 159 aa10.71□□□□□ -0.69
RFTN1-202ENST00000431547 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
RFTN1-202ENST00000431547 A0A1B0GX51 115 aa10.7□□□□□ -0.7
RFTN1-202ENST00000431547 COX6CP09669 75 aa10.7□□□□□ -0.7
RFTN1-202ENST00000431547 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
RFTN1-202ENST00000431547 Q8NBF4 154 aa10.7□□□□□ -0.7
RFTN1-202ENST00000431547 C9orf153Q5TBE3 101 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms