RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TCTE3Q8IZS6 198 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 PRELID3AQ96N28 172 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 GNB1LQ9BYB4 327 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 MAP1LC3AQ9H492 121 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 NDUFA12Q9UI09 145 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 LAMTOR2Q9Y2Q5 125 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 MUC17Q685J3 4493 aa1.89□□□□□ -2.11
PTPN4-204ENST00000431283 LOC389332A0A1B0GUA5 103 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 A0A1B0GVX0 72 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 K7EMI3 77 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 ATP5LO75964 103 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 SRP19P09132 144 aaKnown RBP1.88□□□□□ -2.11
PTPN4-204ENST00000431283 RAB5BP61020 215 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 RPL23P62829 140 aaKnown RBP1.88□□□□□ -2.11
PTPN4-204ENST00000431283 PEA15Q15121 130 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 PDZD11Q5EBL8 140 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 ATP5L2Q7Z4Y8 100 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 CBLN2Q8IUK8 224 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 AMELXQ99217 191 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 CDKN2A-AS1Q9UH64 79 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 NAT8Q9UHE5 227 aa1.88□□□□□ -2.11
PTPN4-204ENST00000431283 ZNF706Q9Y5V0 76 aaPredicted RBP1.88□□□□□ -2.11
PTPN4-204ENST00000431283 TMEM223A0PJW6 202 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 IGIPA6NJ69 53 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 A8MUU9 505 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 H3BRM9 83 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 PRLHP81277 87 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 ASB16-AS1Q495Z4 193 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 FAM19A3Q7Z5A8 133 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 Q8N8P6 123 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 DAND5Q8N907 189 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 COX7B2Q8TF08 81 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 PLEKHB2Q96CS7 222 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 TIMM17AQ99595 171 aa1.87□□□□□ -2.11
PTPN4-204ENST00000431283 NXT2Q9NPJ8 142 aaKnown RBP1.87□□□□□ -2.11
PTPN4-204ENST00000431283 TINCRA0A1B0GVN0 87 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 A0A1B0GXF2 115 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 LINC01549A6NIU2 74 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 SPINK1P00995 79 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 PFN2P35080 140 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 FAM19A2Q8N3H0 131 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 SCGB3A1Q96QR1 104 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 HIGD2AQ9BW72 106 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 TMEM126AQ9H061 195 aa1.86□□□□□ -2.11
PTPN4-204ENST00000431283 TMEM238C9JI98 176 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 M0R378 163 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 SLC25A20O43772 301 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 MT-ND4LP03901 98 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 SPINK8P0C7L1 97 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 RAB14P61106 215 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 S100A12P80511 92 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 COX17Q14061 63 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 SFTA2Q6UW10 78 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 AKAP14Q86UN6 197 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 C3orf22Q8N5N4 141 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 TOMM6Q96B49 74 aa1.85□□□□□ -2.11
PTPN4-204ENST00000431283 SCO1O75880 301 aa1.84□□□□□ -2.11
PTPN4-204ENST00000431283 PMVKQ15126 192 aa1.84□□□□□ -2.11
PTPN4-204ENST00000431283 SPRR4Q96PI1 79 aa1.84□□□□□ -2.11
PTPN4-204ENST00000431283 CST9LQ9H4G1 147 aa1.84□□□□□ -2.11
PTPN4-204ENST00000431283 SND1-IT1Q9HBX3 110 aa1.84□□□□□ -2.11
PTPN4-204ENST00000431283 ERG28Q9UKR5 140 aa1.84□□□□□ -2.11
PTPN4-204ENST00000431283 ETDCA0A1B0GVM5 59 aa1.83□□□□□ -2.12
PTPN4-204ENST00000431283 C9JQL5 133 aa1.83□□□□□ -2.12
PTPN4-204ENST00000431283 ADCYAP1P18509 176 aa1.83□□□□□ -2.12
PTPN4-204ENST00000431283 NDUFA6P56556 154 aa1.83□□□□□ -2.12
PTPN4-204ENST00000431283 LINC00158P58513 81 aa1.83□□□□□ -2.12
PTPN4-204ENST00000431283 RPS29P62273 56 aaKnown RBP1.83□□□□□ -2.12
PTPN4-204ENST00000431283 SSBP3-AS1Q7Z2R9 100 aa1.83□□□□□ -2.12
PTPN4-204ENST00000431283 SMCO4Q9NRQ5 59 aa1.83□□□□□ -2.12
PTPN4-204ENST00000431283 LINC00587B1AMM8 73 aa1.82□□□□□ -2.12
PTPN4-204ENST00000431283 M0R2T5 61 aa1.82□□□□□ -2.12
PTPN4-204ENST00000431283 P0C880 135 aa1.82□□□□□ -2.12
PTPN4-204ENST00000431283 FA2HQ7L5A8 372 aa1.82□□□□□ -2.12
PTPN4-204ENST00000431283 SMCR5Q8TEV8 140 aa1.82□□□□□ -2.12
PTPN4-204ENST00000431283 ZNF625Q96I27 306 aaPredicted RBP1.82□□□□□ -2.12
PTPN4-204ENST00000431283 TRAV9-1A0A075B6T8 112 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 IGLC3P0DOY3 106 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 TMEM170BQ5T4T1 132 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 C9orf153Q5TBE3 101 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 BOD1L2Q8IYS8 172 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 MIR7-3HGQ8N6C7 128 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 MAP1LC3CQ9BXW4 147 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 KCNQ1DNQ9H478 68 aa1.81□□□□□ -2.12
PTPN4-204ENST00000431283 USH2AO75445 5202 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 LINC01546A6NGU7 62 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 NCR3O14931 201 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 ZNF22P17026 224 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-204ENST00000431283 S100PP25815 95 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 SPRR1AP35321 89 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 MT1HP80294 61 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 FABP9Q0Z7S8 132 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 JOSD1Q15040 202 aaPredicted RBP1.8□□□□□ -2.12
PTPN4-204ENST00000431283 PCOTHQ58A44 107 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 MEIG1Q5JSS6 88 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 COX6B2Q6YFQ2 88 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 LIMD2Q9BT23 127 aa1.8□□□□□ -2.12
PTPN4-204ENST00000431283 SYNE2Q8WXH0 6885 aaKnown RBP1.79□□□□□ -2.12
PTPN4-204ENST00000431283 TRBV10-3A0A0K0K1G6 114 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms