RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ACYP2P14621 99 aa5.29□□□□□ -1.56
SYNPO2-202ENST00000429713 DEFB135Q30KP9 77 aa5.29□□□□□ -1.56
SYNPO2-202ENST00000429713 C10orf99Q6UWK7 81 aa5.29□□□□□ -1.56
SYNPO2-202ENST00000429713 UQCR11O14957 56 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 ZNF292O60281 2723 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 H0Y9J4 135 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 ATMQ13315 3056 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 DEFB4AO15263 64 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 DNAJC9-AS1A6NH13 148 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 PRB2P02812 416 aaPredicted RBP5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 Q8N2B8 174 aa5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 RPL37AP61513 92 aaKnown RBP5.28□□□□□ -1.56
SYNPO2-202ENST00000429713 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
SYNPO2-202ENST00000429713 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
SYNPO2-202ENST00000429713 MDFIQ99750 246 aa5.27□□□□□ -1.57
SYNPO2-202ENST00000429713 OCR1Q9BZK8 76 aa5.27□□□□□ -1.57
SYNPO2-202ENST00000429713 KCNQ1DNQ9H478 68 aa5.27□□□□□ -1.57
SYNPO2-202ENST00000429713 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
SYNPO2-202ENST00000429713 MUC3AQ02505 3323 aa5.26□□□□□ -1.57
SYNPO2-202ENST00000429713 FAM218AQ96MZ4 157 aa5.26□□□□□ -1.57
SYNPO2-202ENST00000429713 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
SYNPO2-202ENST00000429713 FLNBO75369 2602 aaKnown RBP5.25□□□□□ -1.57
SYNPO2-202ENST00000429713 LELP1Q5T871 98 aa5.25□□□□□ -1.57
SYNPO2-202ENST00000429713 C18orf65Q6ZTR6 163 aa5.25□□□□□ -1.57
SYNPO2-202ENST00000429713 A8MUN3 132 aa5.25□□□□□ -1.57
SYNPO2-202ENST00000429713 CDSNQ15517 529 aa5.25□□□□□ -1.57
SYNPO2-202ENST00000429713 Q6ZTC4 211 aa5.25□□□□□ -1.57
SYNPO2-202ENST00000429713 SVEP1Q4LDE5 3571 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 ZNF702PQ9H963 129 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 WFDC10BQ8IUB3 73 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 KIAA0087Q14695 138 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 TRAV10A0A0B4J240 114 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 SYCNQ0VAF6 134 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 A0A0J9YWU9 116 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 IGHV4-30-4P0DP06 118 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 PLA2G2AP14555 144 aa5.24□□□□□ -1.57
SYNPO2-202ENST00000429713 LINC00588Q9Y4M8 146 aa5.23□□□□□ -1.57
SYNPO2-202ENST00000429713 NSD1Q96L73 2696 aaPredicted RBP5.23□□□□□ -1.57
SYNPO2-202ENST00000429713 A0A1B0GU69 56 aa5.22□□□□□ -1.57
SYNPO2-202ENST00000429713 IGKV2-28A0A075B6P5 120 aa5.22□□□□□ -1.57
SYNPO2-202ENST00000429713 IGKV2D-28P01615 120 aa5.22□□□□□ -1.57
SYNPO2-202ENST00000429713 DEFB131BA0A096LNP1 70 aa5.22□□□□□ -1.57
SYNPO2-202ENST00000429713 H3BS24 57 aa5.21□□□□□ -1.57
SYNPO2-202ENST00000429713 Q6ZSN1 163 aa5.21□□□□□ -1.58
SYNPO2-202ENST00000429713 PRR3P79522 188 aaKnown RBP5.2□□□□□ -1.58
SYNPO2-202ENST00000429713 SMIM29Q86T20 159 aa5.2□□□□□ -1.58
SYNPO2-202ENST00000429713 WFDC13Q8IUB5 93 aa5.2□□□□□ -1.58
SYNPO2-202ENST00000429713 BBC3Q96PG8 261 aaPredicted RBP5.2□□□□□ -1.58
SYNPO2-202ENST00000429713 A8MTW9 85 aa5.2□□□□□ -1.58
SYNPO2-202ENST00000429713 COA5Q86WW8 74 aa5.19□□□□□ -1.58
SYNPO2-202ENST00000429713 BSNQ9UPA5 3926 aa5.19□□□□□ -1.58
SYNPO2-202ENST00000429713 CYSRT1A8MQ03 144 aa5.18□□□□□ -1.58
SYNPO2-202ENST00000429713 IGLV4-60A0A075B6I1 120 aa5.17□□□□□ -1.58
SYNPO2-202ENST00000429713 DMAC1Q96GE9 116 aa5.17□□□□□ -1.58
SYNPO2-202ENST00000429713 Q6ZRX8 168 aa5.17□□□□□ -1.58
SYNPO2-202ENST00000429713 C6orf48Q9UBA6 75 aa5.17□□□□□ -1.58
SYNPO2-202ENST00000429713 A8MWP4 228 aa5.17□□□□□ -1.58
SYNPO2-202ENST00000429713 PRR4Q16378 134 aa5.16□□□□□ -1.58
SYNPO2-202ENST00000429713 NIPBLQ6KC79 2804 aaeCLIP5.16□□□□□ -1.58
SYNPO2-202ENST00000429713 C16orf95Q9H693 158 aa5.16□□□□□ -1.58
SYNPO2-202ENST00000429713 C11orf45Q8TAV5 145 aa5.16□□□□□ -1.58
SYNPO2-202ENST00000429713 ODF3L2Q3SX64 289 aa5.15□□□□□ -1.58
SYNPO2-202ENST00000429713 Q6ZRP5 223 aa5.15□□□□□ -1.59
SYNPO2-202ENST00000429713 IGLV5-48A0A075B6I7 105 aa5.14□□□□□ -1.59
SYNPO2-202ENST00000429713 VPS13CQ709C8 3753 aa5.14□□□□□ -1.59
SYNPO2-202ENST00000429713 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
SYNPO2-202ENST00000429713 FAM229AH3BQW9 127 aa5.14□□□□□ -1.59
SYNPO2-202ENST00000429713 Q8N9P0 234 aaPredicted RBP5.14□□□□□ -1.59
SYNPO2-202ENST00000429713 REG3GQ6UW15 175 aa5.14□□□□□ -1.59
SYNPO2-202ENST00000429713 CRYBG3Q68DQ2 2970 aa5.14□□□□□ -1.59
SYNPO2-202ENST00000429713 A0A1W2PPR1 153 aa5.13□□□□□ -1.59
SYNPO2-202ENST00000429713 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
SYNPO2-202ENST00000429713 UNQ6190/PRO20217Q6UXQ8 127 aa5.13□□□□□ -1.59
SYNPO2-202ENST00000429713 H3BNG1 76 aa5.13□□□□□ -1.59
SYNPO2-202ENST00000429713 LRCOL1A6NCL2 159 aa5.13□□□□□ -1.59
SYNPO2-202ENST00000429713 LINC00528Q8N1L1 170 aa5.13□□□□□ -1.59
SYNPO2-202ENST00000429713 COL12A1Q99715 3063 aa5.12□□□□□ -1.59
SYNPO2-202ENST00000429713 SPRR4Q96PI1 79 aa5.12□□□□□ -1.59
SYNPO2-202ENST00000429713 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
SYNPO2-202ENST00000429713 IGKV2-24A0A0C4DH68 120 aa5.12□□□□□ -1.59
SYNPO2-202ENST00000429713 LINC01006Q8NI28 216 aa5.12□□□□□ -1.59
SYNPO2-202ENST00000429713 HIVEP1P15822 2718 aa5.11□□□□□ -1.59
SYNPO2-202ENST00000429713 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.11□□□□□ -1.59
SYNPO2-202ENST00000429713 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
SYNPO2-202ENST00000429713 C22orf24Q9Y442 160 aa5.11□□□□□ -1.59
SYNPO2-202ENST00000429713 FLNCQ14315 2725 aa5.11□□□□□ -1.59
SYNPO2-202ENST00000429713 IGSF10Q6WRI0 2623 aa5.11□□□□□ -1.59
SYNPO2-202ENST00000429713 Q5VV11 94 aa5.1□□□□□ -1.59
SYNPO2-202ENST00000429713 IGLV1-51P01701 117 aa5.1□□□□□ -1.59
SYNPO2-202ENST00000429713 PLA2G2DQ9UNK4 145 aa5.09□□□□□ -1.59
SYNPO2-202ENST00000429713 ITPR2Q14571 2701 aa5.09□□□□□ -1.59
SYNPO2-202ENST00000429713 LCE6AA0A183 80 aa5.09□□□□□ -1.59
SYNPO2-202ENST00000429713 CUBNO60494 3623 aa5.09□□□□□ -1.6
SYNPO2-202ENST00000429713 A0A087WSZ3 146 aa5.08□□□□□ -1.6
SYNPO2-202ENST00000429713 OXTP01178 125 aa5.07□□□□□ -1.6
SYNPO2-202ENST00000429713 CSMD2Q7Z408 3487 aa5.07□□□□□ -1.6
SYNPO2-202ENST00000429713 A0A096LNI7 61 aa5.07□□□□□ -1.6
SYNPO2-202ENST00000429713 Q8NAQ8 132 aa5.06□□□□□ -1.6
SYNPO2-202ENST00000429713 IGHV6-1A0A0B4J1U7 121 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 679 ms