RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
THBS3-202ENST00000428962 HIST1H4AP62805 103 aaKnown RBP8.93□□□□□ -0.98
THBS3-202ENST00000428962 IGLV5-37A0A075B6J1 123 aa8.92□□□□□ -0.98
THBS3-202ENST00000428962 ATOX1O00244 68 aa8.92□□□□□ -0.98
THBS3-202ENST00000428962 SERTAD4-AS1Q5TG53 156 aa8.91□□□□□ -0.98
THBS3-202ENST00000428962 C7orf33Q8WU49 177 aa8.91□□□□□ -0.98
THBS3-202ENST00000428962 C9orf153Q5TBE3 101 aa8.91□□□□□ -0.98
THBS3-202ENST00000428962 C5orf47Q569G3 176 aa8.9□□□□□ -0.98
THBS3-202ENST00000428962 CASC10Q5T4H9 136 aa8.9□□□□□ -0.98
THBS3-202ENST00000428962 PRYO14603 147 aa8.89□□□□□ -0.99
THBS3-202ENST00000428962 LOC107984640A0A0U1RRK4 108 aa8.89□□□□□ -0.99
THBS3-202ENST00000428962 J3KT08 172 aa8.89□□□□□ -0.99
THBS3-202ENST00000428962 RPS28P62857 69 aaKnown RBP8.89□□□□□ -0.99
THBS3-202ENST00000428962 TRBV7-4A0A0J9YYF1 115 aa8.88□□□□□ -0.99
THBS3-202ENST00000428962 DHRS4-AS1Q9P1J3 65 aa8.87□□□□□ -0.99
THBS3-202ENST00000428962 PRKDCP78527 4128 aaKnown RBP8.86□□□□□ -0.99
THBS3-202ENST00000428962 UBE2DNLQ8IWF7 75 aa8.85□□□□□ -0.99
THBS3-202ENST00000428962 IGLV1-50A0A075B6I6 118 aa8.84□□□□□ -0.99
THBS3-202ENST00000428962 CRYGAP11844 174 aa8.84□□□□□ -0.99
THBS3-202ENST00000428962 COX7CP15954 63 aa8.84□□□□□ -0.99
THBS3-202ENST00000428962 A0A087WVE0 104 aa8.84□□□□□ -0.99
THBS3-202ENST00000428962 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -0.99
THBS3-202ENST00000428962 Q6ZRX8 168 aa8.84□□□□□ -0.99
THBS3-202ENST00000428962 FAM168BA1KXE4 195 aa8.83□□□□□ -1
THBS3-202ENST00000428962 SPRR1AP35321 89 aa8.83□□□□□ -1
THBS3-202ENST00000428962 Q6ZVQ6 151 aa8.83□□□□□ -1
THBS3-202ENST00000428962 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
THBS3-202ENST00000428962 B9D2Q9BPU9 175 aa8.83□□□□□ -1
THBS3-202ENST00000428962 TGP01266 2768 aa8.82□□□□□ -1
THBS3-202ENST00000428962 M0R2N4 97 aa8.82□□□□□ -1
THBS3-202ENST00000428962 RPL37AP8A6NKH3 93 aa8.82□□□□□ -1
THBS3-202ENST00000428962 PSCAO43653 123 aa8.82□□□□□ -1
THBS3-202ENST00000428962 APLNQ9ULZ1 77 aa8.82□□□□□ -1
THBS3-202ENST00000428962 KRTAP4-16G5E9R7 235 aaPredicted RBP8.81□□□□□ -1
THBS3-202ENST00000428962 CXCL6P80162 114 aa8.81□□□□□ -1
THBS3-202ENST00000428962 FAM19A5Q7Z5A7 132 aaPredicted RBP8.81□□□□□ -1
THBS3-202ENST00000428962 LINC01547P58512 204 aaPredicted RBP8.8□□□□□ -1
THBS3-202ENST00000428962 CNBPP62633 177 aaKnown RBP8.8□□□□□ -1
THBS3-202ENST00000428962 C14orf177Q52M58 125 aa8.8□□□□□ -1
THBS3-202ENST00000428962 HAMPP81172 84 aa8.8□□□□□ -1
THBS3-202ENST00000428962 SERP2Q8N6R1 65 aa8.8□□□□□ -1
THBS3-202ENST00000428962 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
THBS3-202ENST00000428962 FAM19A1Q7Z5A9 133 aa8.79□□□□□ -1
THBS3-202ENST00000428962 KRTAP1-5Q9BYS1 174 aa8.79□□□□□ -1
THBS3-202ENST00000428962 KRTAP7-1Q8IUC3 87 aa8.78□□□□□ -1
THBS3-202ENST00000428962 TMEM258P61165 79 aa8.77□□□□□ -1
THBS3-202ENST00000428962 Q8N377 158 aa8.77□□□□□ -1
THBS3-202ENST00000428962 DEFB105AQ8NG35 78 aa8.77□□□□□ -1
THBS3-202ENST00000428962 C16orf90A8MZG2 172 aa8.77□□□□□ -1.01
THBS3-202ENST00000428962 Q9BRP9 147 aa8.77□□□□□ -1.01
THBS3-202ENST00000428962 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
THBS3-202ENST00000428962 IGLV5-48A0A075B6I7 105 aa8.75□□□□□ -1.01
THBS3-202ENST00000428962 NUPR2A6NF83 97 aa8.75□□□□□ -1.01
THBS3-202ENST00000428962 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
THBS3-202ENST00000428962 BCE1O60756 84 aa8.75□□□□□ -1.01
THBS3-202ENST00000428962 A0A096LNI7 61 aa8.74□□□□□ -1.01
THBS3-202ENST00000428962 UBE2BP63146 152 aa8.74□□□□□ -1.01
THBS3-202ENST00000428962 A0A1B0GW54 56 aa8.73□□□□□ -1.01
THBS3-202ENST00000428962 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
THBS3-202ENST00000428962 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
THBS3-202ENST00000428962 IGKV2-24A0A0C4DH68 120 aa8.71□□□□□ -1.01
THBS3-202ENST00000428962 NREPQ16612 68 aa8.7□□□□□ -1.02
THBS3-202ENST00000428962 TNP2Q05952 138 aa8.69□□□□□ -1.02
THBS3-202ENST00000428962 ST20-AS1Q8NBB2 130 aa8.69□□□□□ -1.02
THBS3-202ENST00000428962 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.68□□□□□ -1.02
THBS3-202ENST00000428962 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
THBS3-202ENST00000428962 DPH3Q96FX2 82 aa8.68□□□□□ -1.02
THBS3-202ENST00000428962 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
THBS3-202ENST00000428962 A0A1W2PNN7 141 aa8.67□□□□□ -1.02
THBS3-202ENST00000428962 ERC2-IT1O76042 136 aa8.67□□□□□ -1.02
THBS3-202ENST00000428962 F8WEM9 126 aa8.66□□□□□ -1.02
THBS3-202ENST00000428962 C3orf84H3BNL1 204 aa8.66□□□□□ -1.02
THBS3-202ENST00000428962 SCXQ7RTU7 201 aa8.66□□□□□ -1.02
THBS3-202ENST00000428962 WWC2-AS2Q96NR7 200 aa8.66□□□□□ -1.02
THBS3-202ENST00000428962 TRAV7A0A075B6U4 112 aa8.66□□□□□ -1.02
THBS3-202ENST00000428962 Q8NBF4 154 aa8.66□□□□□ -1.02
THBS3-202ENST00000428962 STAB2Q8WWQ8 2551 aa8.65□□□□□ -1.02
THBS3-202ENST00000428962 DNAH9Q9NYC9 4486 aa8.65□□□□□ -1.02
THBS3-202ENST00000428962 LINC00474Q9P2X8 69 aa8.65□□□□□ -1.02
THBS3-202ENST00000428962 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
THBS3-202ENST00000428962 BPY2O14599 106 aa8.64□□□□□ -1.03
THBS3-202ENST00000428962 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
THBS3-202ENST00000428962 A0A1W2PNM2 257 aa8.64□□□□□ -1.03
THBS3-202ENST00000428962 PRLHP81277 87 aa8.62□□□□□ -1.03
THBS3-202ENST00000428962 SPRR4Q96PI1 79 aa8.62□□□□□ -1.03
THBS3-202ENST00000428962 COL7A1Q02388 2944 aa8.61□□□□□ -1.03
THBS3-202ENST00000428962 H0Y9J4 135 aa8.61□□□□□ -1.03
THBS3-202ENST00000428962 IGKV4-1P06312 121 aa8.61□□□□□ -1.03
THBS3-202ENST00000428962 CHTF8P0CG12 524 aa8.61□□□□□ -1.03
THBS3-202ENST00000428962 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
THBS3-202ENST00000428962 SMIM29Q86T20 159 aa8.61□□□□□ -1.03
THBS3-202ENST00000428962 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
THBS3-202ENST00000428962 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
THBS3-202ENST00000428962 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
THBS3-202ENST00000428962 CYSTM1Q9H1C7 97 aa8.59□□□□□ -1.03
THBS3-202ENST00000428962 DYNC2H1Q8NCM8 4307 aaKnown RBP8.58□□□□□ -1.04
THBS3-202ENST00000428962 IGLV8-61A0A075B6I0 122 aa8.57□□□□□ -1.04
THBS3-202ENST00000428962 C20orf197Q8N268 126 aa8.57□□□□□ -1.04
THBS3-202ENST00000428962 UBE2AP49459 152 aa8.56□□□□□ -1.04
THBS3-202ENST00000428962 Q8N9L7 120 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms