RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 CLPSL2Q6UWE3 100 aa5.68□□□□□ -1.5
HDAC1-202ENST00000428704 KLK12Q9UKR0 248 aa5.68□□□□□ -1.5
HDAC1-202ENST00000428704 FAT4Q6V0I7 4981 aa5.68□□□□□ -1.5
HDAC1-202ENST00000428704 IGKV2-28A0A075B6P5 120 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 A0A087WTM6 91 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 GVQW2A0A096LPI5 108 aaPredicted RBP5.67□□□□□ -1.5
HDAC1-202ENST00000428704 GAGE12HA6NDE8 117 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 C9JAW5 83 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 IGKV2D-28P01615 120 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 KRTAP26-1Q6PEX3 210 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 PPDPFLQ8WWR9 84 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 TNXBP22105 4242 aa5.67□□□□□ -1.5
HDAC1-202ENST00000428704 F8WDY8 70 aa5.66□□□□□ -1.5
HDAC1-202ENST00000428704 TRACP01848 142 aa5.66□□□□□ -1.5
HDAC1-202ENST00000428704 LINC00337Q8N6G1 96 aa5.66□□□□□ -1.5
HDAC1-202ENST00000428704 CARD19Q96LW7 228 aa5.66□□□□□ -1.5
HDAC1-202ENST00000428704 VPS25Q9BRG1 176 aa5.66□□□□□ -1.5
HDAC1-202ENST00000428704 IGLV10-54A0A075B6I4 117 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 LRCOL1A6NCL2 159 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 H0YGX0 51 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 CRPP02741 224 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 PFN2P35080 140 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 C2orf82Q6UX34 121 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 MTURNQ8N3F0 131 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 NTN5Q8WTR8 489 aaPredicted RBP5.65□□□□□ -1.5
HDAC1-202ENST00000428704 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 Q9HAA7 133 aa5.65□□□□□ -1.5
HDAC1-202ENST00000428704 IGLV5-52A0A0A0MRZ9 124 aa5.64□□□□□ -1.51
HDAC1-202ENST00000428704 B5MCH6 92 aa5.64□□□□□ -1.51
HDAC1-202ENST00000428704 SPAG11BQ08648 103 aa5.64□□□□□ -1.51
HDAC1-202ENST00000428704 UBE2WQ96B02 151 aa5.64□□□□□ -1.51
HDAC1-202ENST00000428704 LCE5AQ5TCM9 118 aa5.63□□□□□ -1.51
HDAC1-202ENST00000428704 CLEC2BQ92478 149 aa5.63□□□□□ -1.51
HDAC1-202ENST00000428704 C2orf48Q96LS8 159 aa5.63□□□□□ -1.51
HDAC1-202ENST00000428704 A0A1B0GX51 115 aa5.62□□□□□ -1.51
HDAC1-202ENST00000428704 SMIM11BQ8TCY0 68 aa5.62□□□□□ -1.51
HDAC1-202ENST00000428704 FAM30AQ9NZY2 134 aa5.62□□□□□ -1.51
HDAC1-202ENST00000428704 PSCAO43653 123 aa5.61□□□□□ -1.51
HDAC1-202ENST00000428704 UNQ6190/PRO20217Q6UXQ8 127 aa5.61□□□□□ -1.51
HDAC1-202ENST00000428704 Q8N814 137 aa5.61□□□□□ -1.51
HDAC1-202ENST00000428704 TMEM126AQ9H061 195 aa5.61□□□□□ -1.51
HDAC1-202ENST00000428704 C10orf25Q5T742 122 aa5.6□□□□□ -1.51
HDAC1-202ENST00000428704 C1orf43Q9BWL3 253 aa5.6□□□□□ -1.51
HDAC1-202ENST00000428704 LECT2O14960 151 aa5.59□□□□□ -1.51
HDAC1-202ENST00000428704 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.51
HDAC1-202ENST00000428704 C6orf48Q9UBA6 75 aa5.59□□□□□ -1.51
HDAC1-202ENST00000428704 C9orf116Q5BN46 136 aaPredicted RBP5.58□□□□□ -1.52
HDAC1-202ENST00000428704 C15orf56Q8N910 161 aa5.58□□□□□ -1.52
HDAC1-202ENST00000428704 OR13C6PQ8NH95 151 aa5.58□□□□□ -1.52
HDAC1-202ENST00000428704 SIGMAR1Q99720 223 aa5.58□□□□□ -1.52
HDAC1-202ENST00000428704 FAM240AA0A1B0GVK7 77 aa5.57□□□□□ -1.52
HDAC1-202ENST00000428704 BAALC-AS2P0C853 105 aa5.57□□□□□ -1.52
HDAC1-202ENST00000428704 LINC00167Q96N53 147 aa5.57□□□□□ -1.52
HDAC1-202ENST00000428704 CAMK2N2Q96S95 79 aa5.57□□□□□ -1.52
HDAC1-202ENST00000428704 MUC2Q02817 5179 aa5.56□□□□□ -1.52
HDAC1-202ENST00000428704 IGKV2D-24A0A075B6R9 120 aa5.56□□□□□ -1.52
HDAC1-202ENST00000428704 TEX49A0A1B0GTD5 131 aa5.56□□□□□ -1.52
HDAC1-202ENST00000428704 IGLV6-57P01721 117 aa5.56□□□□□ -1.52
HDAC1-202ENST00000428704 SCGB1A1P11684 91 aa5.56□□□□□ -1.52
HDAC1-202ENST00000428704 KRTAP10-4P60372 401 aaPredicted RBP5.56□□□□□ -1.52
HDAC1-202ENST00000428704 RMI2Q96E14 147 aa5.56□□□□□ -1.52
HDAC1-202ENST00000428704 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.55□□□□□ -1.52
HDAC1-202ENST00000428704 NDUFC2-KCTD14E9PQ53 114 aa5.55□□□□□ -1.52
HDAC1-202ENST00000428704 TLX1NBP0CAT3 122 aa5.55□□□□□ -1.52
HDAC1-202ENST00000428704 PRR3P79522 188 aaKnown RBP5.55□□□□□ -1.52
HDAC1-202ENST00000428704 C22orf24Q9Y442 160 aa5.55□□□□□ -1.52
HDAC1-202ENST00000428704 A0A087WYN8 130 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 DNAL4O96015 105 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 ACYP1P07311 99 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 PCP4P48539 62 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 Q6ZRU5 148 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 Q6ZSA8 131 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 Q8NDZ9 215 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 LINC00526Q96FQ7 95 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 OBSCN-AS1Q96MR7 158 aa5.54□□□□□ -1.52
HDAC1-202ENST00000428704 FSIP2Q5CZC0 6907 aa5.53□□□□□ -1.52
HDAC1-202ENST00000428704 TRBV7-6A0A0J9YX20 115 aa5.53□□□□□ -1.52
HDAC1-202ENST00000428704 H3BQ85 93 aa5.53□□□□□ -1.52
HDAC1-202ENST00000428704 SNCGO76070 127 aa5.53□□□□□ -1.52
HDAC1-202ENST00000428704 SYCNQ0VAF6 134 aa5.53□□□□□ -1.52
HDAC1-202ENST00000428704 HIGD2BQ4VC39 106 aa5.53□□□□□ -1.52
HDAC1-202ENST00000428704 S100A7L2Q5SY68 101 aa5.53□□□□□ -1.52
HDAC1-202ENST00000428704 M0R378 163 aa5.52□□□□□ -1.53
HDAC1-202ENST00000428704 VPREB1P12018 145 aa5.52□□□□□ -1.53
HDAC1-202ENST00000428704 LINC00575Q6W349 94 aa5.52□□□□□ -1.53
HDAC1-202ENST00000428704 SCXQ7RTU7 201 aa5.52□□□□□ -1.53
HDAC1-202ENST00000428704 USP17L23D6RBM5 183 aa5.51□□□□□ -1.53
HDAC1-202ENST00000428704 C6orf99Q4VX62 202 aa5.51□□□□□ -1.53
HDAC1-202ENST00000428704 ORMDL1Q9P0S3 153 aa5.51□□□□□ -1.53
HDAC1-202ENST00000428704 TMEM256-PLSCR3K7ERE1 68 aa5.5□□□□□ -1.53
HDAC1-202ENST00000428704 NCR3O14931 201 aa5.5□□□□□ -1.53
HDAC1-202ENST00000428704 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
HDAC1-202ENST00000428704 SDIM1Q6ZPB5 146 aa5.5□□□□□ -1.53
HDAC1-202ENST00000428704 XAGE1AQ9HD64 81 aa5.5□□□□□ -1.53
HDAC1-202ENST00000428704 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
HDAC1-202ENST00000428704 JMJD7-PLA2G4BH0Y9G9 81 aa5.49□□□□□ -1.53
HDAC1-202ENST00000428704 RPL37AP61513 92 aaKnown RBP5.49□□□□□ -1.53
HDAC1-202ENST00000428704 Q6ZRP5 223 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms